TOMM34

General Information

Gene Name : TOMM34
Gene ID : ENSG00000025772.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TOMM34)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TOMM34	ENSG00000025772.7	26.60	36.53	31.57	ENCSR000AEF
HepG2	TOMM34	ENSG00000025772.7	71.20	75.05	73.12	ENCSR985KAT
K562	TOMM34	ENSG00000025772.7	45.26	46.70	45.98	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TOMM34 is not avaliable on ENCORE database.

Proteins bound to RNA

TOMM34 RNA is bound by 14 proteins.

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eCLIP assay for TOMM34 is not avaliable on ENCORE database.

14 proteins are bound to TOMM34 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	43571050	43571284	-	3'-UTR,intron-Distal	5.59490	24.27438	HepG2	UPF1
chr20	43571519	43571647	-	3'-UTR,intron-Distal	4.08004	19.95133	K562	UPF1
chr20	43571144	43571252	-	3'-UTR,intron-Distal	3.75477	17.93753	K562	UPF1
chr20	43571319	43571426	-	3'-UTR,intron-Distal	4.81720	17.59561	K562	UPF1
chr20	43571139	43571328	-	3'-UTR,intron-Distal	4.83640	14.38866	HepG2	AKAP1
chr20	43570873	43570935	-	3'-UTR,intron-Distal	6.21375	13.73274	HepG2	SUB1
chr20	43571085	43571144	-	3'-UTR,intron-Distal	4.09011	11.97857	K562	UPF1
chr20	43571465	43571519	-	3'-UTR,intron-Distal	3.83785	10.85611	K562	UPF1
chr20	43571204	43571287	-	3'-UTR,intron-Distal	5.01779	9.81639	K562	PUM2
chr20	43583617	43583719	-	CDS,intron-Distal,intron-Proximal	4.32588	8.77485	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 34 entries

eCLIP assay for TOMM34 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TOMM34 is not available on ENCORE database.
128 RBPs can affect the levels of TOMM34.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TOMM34 is not available on ENCORE database.

128 RBPs can affect the gene expression of TOMM34 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TOMM34	ENSG00000025772.7	7097.80110	1208.04140	2.55460	99999.99999	99999.99999	HepG2	ACO1
TOMM34	ENSG00000025772.7	6372.25570	1604.30060	1.98980	131.90120	128.95530	HepG2	CELF1
TOMM34	ENSG00000025772.7	4457.94270	1733.31110	1.36270	115.37740	112.84410	HepG2	PUM1
TOMM34	ENSG00000025772.7	3596.14860	1442.01640	1.31830	75.82370	74.12730	HepG2	SRSF1
TOMM34	ENSG00000025772.7	537.03030	1710.45270	-1.67130	60.16750	57.10080	HepG2	NOL12
TOMM34	ENSG00000025772.7	4375.22140	2198.70270	0.99260	52.98270	51.51350	HepG2	SRFBP1
TOMM34	ENSG00000025772.7	10922.98560	1832.58550	2.57530	53.41840	50.90660	HepG2	FIP1L1
TOMM34	ENSG00000025772.7	4225.56900	750.43380	2.49320	50.84600	47.91980	HepG2	CNOT7
TOMM34	ENSG00000025772.7	733.33410	1701.82580	-1.21450	41.60820	39.19230	HepG2	EIF4G1
TOMM34	ENSG00000025772.7	3956.62340	2028.57610	0.96370	41.02890	38.93050	HepG2	AUH
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 156 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TOMM34 is not available on ENCORE database.

13 RBPs can affect the splicing of TOMM34 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TOMM34	ENSG00000025772.7	chr20	-	43577370	43577518	43572093	43572220	43580473	43580679	-0.33900	0.00000	0.00000	excluded	K562	AQR
SE	TOMM34	ENSG00000025772.7	chr20	-	43577370	43577518	43572093	43572220	43580473	43580643	-0.17400	0.00000	0.00005	excluded	K562	SUPV3L1
SE	TOMM34	ENSG00000025772.7	chr20	-	43577370	43577518	43572093	43572220	43580473	43580643	-0.16100	0.00000	0.00010	excluded	HepG2	FTO
SE	TOMM34	ENSG00000025772.7	chr20	-	43577370	43577518	43572093	43572220	43580473	43580643	-0.11100	0.00000	0.00032	excluded	HepG2	PCBP1
SE	TOMM34	ENSG00000025772.7	chr20	-	43577370	43577518	43572093	43572220	43580473	43580643	-0.13200	0.00000	0.00001	excluded	HepG2	SF3B4
SE	TOMM34	ENSG00000025772.7	chr20	-	43577370	43577518	43572093	43572220	43580473	43580643	-0.19700	0.00000	0.00000	excluded	K562	HNRNPC
A3SS	TOMM34	ENSG00000025772.7	chr20	-	43580473	43580701	43580473	43580643	43583708	43583837	0.10000	0.00000	0.00000	longer	K562	AQR
A3SS	TOMM34	ENSG00000025772.7	chr20	-	43572093	43572318	43572093	43572220	43577370	43577518	0.12400	0.00000	0.00000	longer	K562	AQR
SE	TOMM34	ENSG00000025772.7	chr20	-	43577370	43577518	43572093	43572220	43580473	43580643	-0.13800	0.00001	0.00065	excluded	K562	PRPF8
SE	TOMM34	ENSG00000025772.7	chr20	-	43577370	43577518	43572093	43572220	43580473	43580643	-0.09600	0.00001	0.00189	excluded	HepG2	DDX59

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TOMM34

General Information

Functions

Localization

Domains (AlphaFold: TOMM34)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TOMM34 is not avaliable on ENCORE database.

14 proteins are bound to TOMM34 RNA:

eCLIP assay for TOMM34 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TOMM34 is not available on ENCORE database.

128 RBPs can affect the gene expression of TOMM34 :

The Knockdown/knockout RNA-Seq assay for TOMM34 is not available on ENCORE database.

13 RBPs can affect the splicing of TOMM34 :

The Knockdown/knockout RNA-Seq assay for TOMM34 is not avaliable on ENCORE database.