PAX6

General Information

Gene Name       : PAX6
Gene ID             : ENSG00000007372.22
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PAX6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PAX6ENSG00000007372.220.110.100.11ENCSR000AEF
HepG2PAX6ENSG00000007372.220.180.400.29ENCSR985KAT
K562PAX6ENSG00000007372.228.907.368.13ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PAX6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PAX6 RNA is bound by 1 proteins.  







eCLIP assay for PAX6 is not avaliable on ENCORE database.





1 proteins are bound to PAX6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr113182784631827926-intron-Distal,intron-Proximal3.035504.34719K562TIA1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PAX6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PAX6 is not available on ENCORE database.

  • 106 RBPs can affect the levels of PAX6.  








The Knockdown/knockout RNA-Seq assay for PAX6 is not available on ENCORE database.





106 RBPs can affect the gene expression of PAX6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PAX6ENSG00000007372.16101.8511036.296701.488404.585802.44180HepG2AARS
PAX6ENSG00000007372.1651.4690016.342401.655004.172703.45470HepG2ACO1
PAX6ENSG00000007372.1613.3587041.31640-1.628903.152702.09240HepG2ADAR
PAX6ENSG00000007372.1660.246601.877405.0039011.5275010.51430HepG2AKAP1
PAX6ENSG00000007372.1679.4047033.104301.262103.568202.39190HepG2AKAP8
PAX6ENSG00000007372.1666.2075016.408302.012506.660605.52290HepG2AKAP8L
PAX6ENSG00000007372.1612.922401.554503.055202.165901.46690HepG2ASCC1
PAX6ENSG00000007372.169.4151032.18390-1.773302.533301.67220HepG2BCLAF1
PAX6ENSG00000007372.169.1141079.58520-3.126305.277704.48440HepG2BOP1
PAX6ENSG00000007372.1663.85830115.98950-0.861002.516801.59200HepG2CCAR1
PAX6ENSG00000007372.1641.7714084.38160-1.014402.489701.76830HepG2CNOT7
PAX6ENSG00000007372.16132.5505073.070400.859103.139902.41280HepG2CPSF6
PAX6ENSG00000007372.1615.7530042.36740-1.427302.781201.76100HepG2YBX3
PAX6ENSG00000007372.164.7484022.88300-2.268802.612701.56360HepG2CSTF2
PAX6ENSG00000007372.16155.1637041.944901.8871013.9820012.75300HepG2CELF1
PAX6ENSG00000007372.1613.5226045.08210-1.737203.740002.90010HepG2DAZAP1
PAX6ENSG00000007372.163.4142016.23720-2.249702.092801.49370HepG2DDX21
PAX6ENSG00000007372.1639.817401.800804.466608.020007.00390HepG2DDX3X
PAX6ENSG00000007372.16136.7534036.407001.909208.491507.21750HepG2DDX55
PAX6ENSG00000007372.16225.1736082.974501.440207.560205.98650HepG2DDX59
PAX6ENSG00000007372.1677.307301.541405.6482017.9941016.60340HepG2DDX6
PAX6ENSG00000007372.168.2506040.12820-2.282004.707203.44340HepG2DHX30
PAX6ENSG00000007372.1679.5959027.457201.535404.140303.04990HepG2EIF3D
PAX6ENSG00000007372.1644.053601.597804.785008.754207.56730HepG2EIF4B
PAX6ENSG00000007372.1610.7935044.49260-2.043404.213003.22150HepG2EIF4G1
PAX6ENSG00000007372.1645.3747015.461301.553103.082101.88090HepG2FASTKD2
PAX6ENSG00000007372.16237.3572031.827002.8986022.9112021.09130HepG2FIP1L1
PAX6ENSG00000007372.1644.265401.653004.742909.699208.47310HepG2FXR1
PAX6ENSG00000007372.1663.0433027.657801.188602.727801.71740HepG2GNB2L1
PAX6ENSG00000007372.169.7331082.84980-3.089505.277504.41130HepG2GPKOW
PAX6ENSG00000007372.16166.9503078.132701.095304.718203.27590HepG2GRSF1
PAX6ENSG00000007372.164.1225042.00570-3.349006.538505.60650HepG2HNRNPA1
PAX6ENSG00000007372.1624.5856073.09840-1.572004.326702.43140HepG2HNRNPD
PAX6ENSG00000007372.1629.3416069.98990-1.254203.520202.71930HepG2HNRNPF
PAX6ENSG00000007372.1632.720701.547104.402406.717105.66390HepG2HNRNPK
PAX6ENSG00000007372.1620.5118068.92060-1.748505.324204.35250HepG2IGF2BP1
PAX6ENSG00000007372.1614.050301.564403.166802.456801.81620HepG2IGF2BP2
PAX6ENSG00000007372.1694.509201.462106.0142016.4443014.32210HepG2IGF2BP3
PAX6ENSG00000007372.1689.9228047.409000.923403.029702.26540HepG2ILF2
PAX6ENSG00000007372.1629.4421082.28150-1.482704.069702.43800HepG2ILF3
PAX6ENSG00000007372.1628.8441080.51040-1.480903.721002.30410HepG2KHDRBS1
PAX6ENSG00000007372.1610.8114036.01660-1.736102.756901.51170HepG2KRR1
PAX6ENSG00000007372.1668.63480122.46210-0.835302.504701.71600HepG2LARP4
PAX6ENSG00000007372.1680.6140027.103701.572403.644502.33960HepG2LARP7
PAX6ENSG00000007372.16119.5149028.731502.056406.560504.99730HepG2METAP2
PAX6ENSG00000007372.168.2329080.59320-3.291204.728703.44250HepG2MTPAP
PAX6ENSG00000007372.1630.604301.704304.166404.886504.05730HepG2NCBP2
PAX6ENSG00000007372.1681.3737044.704300.864002.636401.89240HepG2NOL12
PAX6ENSG00000007372.163.5726070.09120-4.294207.153905.98820HepG2NSUN2
PAX6ENSG00000007372.1687.5771045.943500.930602.814301.95910HepG2PARN
PAX6ENSG00000007372.1612.1557033.69240-1.470802.361201.64020HepG2PRPF4
PAX6ENSG00000007372.1695.623800.436707.7744027.2082025.83780HepG2PTBP1
PAX6ENSG00000007372.169.4318042.67950-2.177904.256303.53520HepG2PUF60
PAX6ENSG00000007372.1618.4423045.27540-1.295702.245201.63810HepG2PUM2
PAX6ENSG00000007372.1610.109300.474004.414402.111401.55370HepG2QKI
PAX6ENSG00000007372.16365.1883021.812204.0653040.9002038.55350HepG2RAVER1
PAX6ENSG00000007372.16143.2863035.466902.0143012.1202010.52280HepG2RBM15
PAX6ENSG00000007372.16132.8445028.290302.231305.467804.80150HepG2RBM22
PAX6ENSG00000007372.1617.153700.429805.318504.337603.50880HepG2RBM25
PAX6ENSG00000007372.1635.580300.486406.192502.935902.38090HepG2NELFE
PAX6ENSG00000007372.1625.340300.452305.807906.386805.50520HepG2RECQL
PAX6ENSG00000007372.1675.6096026.724101.500304.337203.58420HepG2RPS19
PAX6ENSG00000007372.1619.0591084.83430-2.154205.645504.50030HepG2RPS3A
PAX6ENSG00000007372.1675.2983030.769801.291003.187702.02900HepG2RPS5
PAX6ENSG00000007372.16341.1685027.800303.6172041.7636039.45920HepG2RRP9
PAX6ENSG00000007372.1620.9977079.88340-1.927704.714503.00920HepG2SART3
PAX6ENSG00000007372.1619.0570080.53070-2.079206.103303.89610HepG2SBDS
PAX6ENSG00000007372.1660.8943026.810801.183402.456201.56800HepG2SERBP1
PAX6ENSG00000007372.1617.9293078.26800-2.126103.775902.96340HepG2SF3B1
PAX6ENSG00000007372.1668.272100.455607.2273018.3523017.03820HepG2SF3B4
PAX6ENSG00000007372.16147.0153048.204701.6086010.123309.01660HepG2SMN1
PAX6ENSG00000007372.1676.6212022.374201.775805.443704.06910HepG2SMNDC1
PAX6ENSG00000007372.16516.9448031.951404.0160092.5151090.66790HepG2SRFBP1
PAX6ENSG00000007372.1643.422300.475206.5138010.8998010.09570HepG2SRSF1
PAX6ENSG00000007372.16283.0592084.185701.749402.495501.54960HepG2SRSF3
PAX6ENSG00000007372.1636.0723068.76080-0.930702.068401.45700HepG2SRSF7
PAX6ENSG00000007372.1617.767500.386305.523405.255104.53750HepG2SRSF9
PAX6ENSG00000007372.163.6885027.73880-2.910804.515103.89190HepG2SSB
PAX6ENSG00000007372.1613.191300.426104.952203.315202.71010HepG2TAF15
PAX6ENSG00000007372.166.7572035.27510-2.384203.962202.70180HepG2TBRG4
PAX6ENSG00000007372.1615.045600.392605.260104.211803.18920HepG2TIA1
PAX6ENSG00000007372.1612.6555045.10820-1.833604.072503.49090HepG2TIAL1
PAX6ENSG00000007372.1681.6978027.262201.583302.910002.26640HepG2U2AF1
PAX6ENSG00000007372.16103.3327018.302502.497106.041004.52830HepG2U2AF2
PAX6ENSG00000007372.1647.0504021.415901.135402.396101.68930HepG2UCHL5
PAX6ENSG00000007372.165.6710033.20460-2.549704.173902.92810HepG2UPF2
PAX6ENSG00000007372.1630.0724075.99200-1.337403.559502.30860HepG2XPO5
PAX6ENSG00000007372.162.0171035.68160-4.144807.133205.97970HepG2XRN2
PAX6ENSG00000007372.16200.54890423.70760-1.079109.857708.52740K562AKAP8L
PAX6ENSG00000007372.16123.8626053.934101.199404.621103.89780K562AQR
PAX6ENSG00000007372.16285.16720444.57820-0.640605.372804.05110K562ATP5C1
PAX6ENSG00000007372.16302.64910486.60760-0.685106.015504.24570K562CCDC124
PAX6ENSG00000007372.16144.8503090.467900.679002.413701.67650K562CPSF6
PAX6ENSG00000007372.1635.6238068.68400-0.947102.482801.86050K562DDX47
PAX6ENSG00000007372.16121.1742067.760200.838503.251901.80340K562DDX6
PAX6ENSG00000007372.1649.9679017.060201.550303.234102.24210K562EFTUD2
PAX6ENSG00000007372.16283.2931056.752102.3194028.6466026.77020K562EIF2S2
PAX6ENSG00000007372.16217.9677092.079701.243107.616906.15740K562FMR1
PAX6ENSG00000007372.16140.1664078.059200.844403.064502.09710K562FTO
PAX6ENSG00000007372.1635.3904072.61250-1.036902.795502.18750K562FXR1
PAX6ENSG00000007372.16793.1884093.872403.0788072.6027069.58500K562HSPD1
PAX6ENSG00000007372.16299.25760449.64700-0.587402.018601.32280K562KIF1C
PAX6ENSG00000007372.1680.2868037.103101.113503.249401.71310K562LARP7
PAX6ENSG00000007372.1694.0292041.573501.177304.010603.05250K562MTPAP
PAX6ENSG00000007372.16223.30950353.07240-0.660903.039002.10650K562NAA15
PAX6ENSG00000007372.16134.6333069.727500.949103.821602.35900K562NCBP2
PAX6ENSG00000007372.1684.8840046.196100.877602.455501.74820K562NSUN2
PAX6ENSG00000007372.16111.8001044.784201.319805.633604.49280K562POLR2G
PAX6ENSG00000007372.1667.7537016.601602.028905.356204.31000K562PRPF8
PAX6ENSG00000007372.16124.1493034.392001.851808.799406.99390K562PSIP1
PAX6ENSG00000007372.16192.68740409.41950-1.0873011.2690010.09240K562RBM15
PAX6ENSG00000007372.1639.3308078.22440-0.992002.876501.75870K562NELFE
PAX6ENSG00000007372.16344.68330172.341800.999903.534502.12700K562SF1
PAX6ENSG00000007372.16158.5153082.179500.947703.624102.50370K562SF3B1
PAX6ENSG00000007372.16508.35800197.934501.360707.470405.09290K562SNRNP200
PAX6ENSG00000007372.16145.4997044.165201.719905.122903.29060K562SSB
PAX6ENSG00000007372.1625.3906076.91830-1.599005.451504.44140K562TARDBP
PAX6ENSG00000007372.1650.5326017.009201.570803.224702.12150K562UCHL5
PAX6ENSG00000007372.16486.86240201.482101.272806.752204.01200K562XPO5
PAX6ENSG00000007372.16454.07240232.930100.962903.949101.89290K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PAX6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PAX6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PAX6 is not avaliable on ENCORE database.