FARP2

General Information

Gene Name       : FARP2
Gene ID             : ENSG00000006607.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FARP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FARP2ENSG00000006607.1330.1125.0527.58ENCSR000AEF
HepG2FARP2ENSG00000006607.1326.4331.0928.76ENCSR985KAT
K562FARP2ENSG00000006607.1316.9515.8916.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FARP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • FARP2 RNA is bound by 24 proteins.  







eCLIP assay for FARP2 is not avaliable on ENCORE database.





24 proteins are bound to FARP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2242384350242384403+3'-UTR,intron-Distal3.343187.59462K562UPF1
chr2242383542242383612+3'-UTR,intron-Distal3.307983.85107K562UPF1
chr2242383935242383997+3'-UTR,intron-Distal3.320058.90098HepG2GRSF1
chr2242405071242405130+3'-UTR,CDS,intron-Distal,intron-Proximal3.323893.16095HepG2U2AF2
chr2242312500242312586+5'-UTR,CDS4.576437.72847HepG2PPIG
chr2242312498242312613+5'-UTR,CDS,intron-Proximal3.540583.43213K562UCHL5
chr2242312509242312604+5'-UTR,CDS3.024665.00905HepG2BCLAF1
chr2242295696242295815+5'-UTR,intron-Proximal3.053706.63916HepG2NCBP2
chr2242357428242357502+CDS3.102883.94979HepG2BCLAF1
chr2242343343242343369+CDS,intron-Proximal4.317885.47926K562AQR
chr2242373571242373654+CDS,intron-Proximal3.277725.79905HepG2BCLAF1
chr2242357375242357410+CDS,intron-Proximal3.542165.90680HepG2PPIG
chr2242343289242343377+CDS,intron-Proximal3.980303.80193HepG2GRWD1
chr2242380704242380775+CDS,intron-Proximal3.616375.76944HepG2U2AF2
chr2242343333242343402+CDS,intron-Proximal3.694896.02950HepG2PRPF8
chr2242346988242347031+CDS,intron-Proximal3.844364.76554HepG2BCLAF1
chr2242352771242352844+CDS,intron-Proximal5.7413012.09921HepG2BCLAF1
chr2242343221242343268+CDS,intron-Proximal4.717194.64001HepG2U2AF2
chr2242357504242357566+CDS,intron-Proximal5.141267.36776HepG2PRPF8
chr2242357375242357413+CDS,intron-Proximal4.810055.68196HepG2BCLAF1
chr2242346942242347057+CDS,intron-Proximal4.218904.45914HepG2PRPF8
chr2242374376242374438+CDS,intron-Proximal3.673844.17155HepG2BCLAF1
chr2242350447242350549+CDS,intron-Proximal3.2153010.14543HepG2PPIG
chr2242403301242403343+CDS,intron-Proximal3.359094.05586HepG2U2AF2
chr2242403361242403432+CDS,intron-Proximal4.4356310.85246HepG2PRPF8
chr2242343303242343352+CDS,intron-Proximal3.961594.76554HepG2BCLAF1
chr2242422939242422970+CDS,intron-Proximal4.957927.46483HepG2PRPF8
chr2242352719242352839+CDS,intron-Proximal3.300605.96568HepG2GRWD1
chr2242422923242422939+CDS3.133944.51097HepG2PRPF8
chr2242425154242425252+intron-Distal3.373774.16645HepG2HNRNPK
chr2242399244242399294+intron-Distal4.049863.18939HepG2RBFOX2
chr2242310099242310182+intron-Distal3.068533.68839K562KHSRP
chr2242424967242425052+intron-Distal5.8877618.97112HepG2PCBP2
chr2242313971242314078+intron-Distal4.3445913.97535HepG2RBFOX2
chr2242310848242310898+intron-Distal4.580763.18269HepG2XPO5
chr2242316117242316251+intron-Distal5.334687.15660HepG2HNRNPM
chr2242394179242394288+intron-Distal3.805003.77350HepG2CSTF2
chr2242429114242429189+intron-Distal4.466597.29386HepG2U2AF2
chr2242424650242424733+intron-Distal3.245023.60809HepG2HNRNPK
chr2242399041242399134+intron-Distal5.6355210.28087HepG2RBFOX2
chr2242328931242329008+intron-Distal5.2242510.98400HepG2CSTF2
chr2242328938242329018+intron-Distal3.830323.14687K562CSTF2T
chr2242424861242424967+intron-Distal3.240704.44773HepG2DDX59
chr2242425070242425173+intron-Distal5.9385821.84366HepG2PCBP2
chr2242424577242424700+intron-Distal4.9965229.38671HepG2PCBP2
chr2242345864242345973+intron-Distal3.350127.10518HepG2ILF3
chr2242336777242336880+intron-Distal5.7579119.00058HepG2CSTF2
chr2242346058242346118+intron-Distal4.324095.27745HepG2ILF3
chr2242424753242424847+intron-Distal5.5364421.54439HepG2PCBP2
chr2242428544242428627+intron-Distal4.733665.37406HepG2HNRNPM
chr2242424684242424734+intron-Distal4.409213.97933HepG2DDX59
chr2242425173242425350+intron-Distal5.7115130.51808HepG2PCBP2
chr2242355447242355672+intron-Distal4.633555.30489K562TARDBP
chr2242329261242329329+intron-Distal3.190053.10640HepG2SUGP2
chr2242325190242325322+intron-Distal3.028084.09021HepG2HNRNPL
chr2242424850242424941+intron-Distal4.3101917.98347HepG2PCBP2
chr2242396628242396743+intron-Distal4.350116.92189HepG2PCBP2
chr2242423775242423823+intron-Proximal4.229705.73742HepG2RBM22
chr2242343369242343391+intron-Proximal5.317886.22530K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FARP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FARP2 is not available on ENCORE database.

  • 79 RBPs can affect the levels of FARP2.  








The Knockdown/knockout RNA-Seq assay for FARP2 is not available on ENCORE database.





79 RBPs can affect the gene expression of FARP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FARP2ENSG00000006607.9884.487901254.11210-0.503803.560802.96730HepG2AKAP1
FARP2ENSG00000006607.9832.468001101.64640-0.404203.369901.82940HepG2ATP5C1
FARP2ENSG00000006607.91189.162101564.27240-0.395505.250604.35480HepG2AUH
FARP2ENSG00000006607.9754.40560985.70610-0.385802.213801.37920HepG2BCCIP
FARP2ENSG00000006607.9609.96460809.78920-0.408802.902702.29090HepG2BOP1
FARP2ENSG00000006607.9576.36080938.59790-0.703509.021607.74500HepG2CALR
FARP2ENSG00000006607.91326.46950985.839000.428103.306202.46600HepG2CIRBP
FARP2ENSG00000006607.9732.321801075.44670-0.554402.977002.18000HepG2CNOT7
FARP2ENSG00000006607.9876.001301269.06490-0.534808.175907.18160HepG2CELF1
FARP2ENSG00000006607.91052.254301364.61110-0.375006.046705.01130HepG2DAZAP1
FARP2ENSG00000006607.9561.73970906.78730-0.690905.064103.38260HepG2DDX27
FARP2ENSG00000006607.9665.69440969.16530-0.541903.882202.98150HepG2DDX55
FARP2ENSG00000006607.9710.01000901.27480-0.344103.124002.38130HepG2DNAJC21
FARP2ENSG00000006607.91396.189801096.195600.348902.064001.50950HepG2EIF4A3
FARP2ENSG00000006607.9983.493501289.60630-0.390903.172202.30310HepG2EIF4G2
FARP2ENSG00000006607.91230.089401795.98750-0.5460010.119609.08790HepG2ETF1
FARP2ENSG00000006607.91268.778301030.894000.299402.348301.57990HepG2EWSR1
FARP2ENSG00000006607.9495.10410629.99840-0.347602.436701.34210HepG2FAM120A
FARP2ENSG00000006607.9847.919301232.84060-0.540004.010703.09820HepG2FIP1L1
FARP2ENSG00000006607.91364.209801026.091900.410802.854102.17910HepG2G3BP1
FARP2ENSG00000006607.91515.955501089.500100.476504.103403.01000HepG2G3BP2
FARP2ENSG00000006607.91007.076001254.09030-0.316503.393302.37270HepG2HNRNPA2B1
FARP2ENSG00000006607.9795.331401243.07280-0.6443014.1617012.74870HepG2HNRNPL
FARP2ENSG00000006607.9471.540401005.41540-1.0923027.2822025.53790HepG2HNRNPU
FARP2ENSG00000006607.91497.148301042.953200.521404.680203.82260HepG2IGF2BP2
FARP2ENSG00000006607.9854.722901026.99840-0.264902.755802.02480HepG2ILF2
FARP2ENSG00000006607.9915.01180713.112500.359602.425301.72360HepG2NSUN2
FARP2ENSG00000006607.9944.739001291.67780-0.451304.508903.76920HepG2PUF60
FARP2ENSG00000006607.91199.999101371.15520-0.192402.040201.51530HepG2PUM1
FARP2ENSG00000006607.91462.633701004.432100.542102.691801.99570HepG2RAVER1
FARP2ENSG00000006607.9903.754401501.11460-0.7320014.4465013.45090HepG2RBM22
FARP2ENSG00000006607.91593.994201197.888700.412105.343704.63150HepG2NELFE
FARP2ENSG00000006607.91342.176801115.640500.266602.616902.01540HepG2RECQL
FARP2ENSG00000006607.9854.085901053.28070-0.302401.984201.39460HepG2RPLP0
FARP2ENSG00000006607.9811.527401062.03670-0.388102.900002.08250HepG2RPS2
FARP2ENSG00000006607.9729.70390895.36630-0.295202.842202.19140HepG2SAFB2
FARP2ENSG00000006607.91120.68680796.041300.493404.434503.56010HepG2SF3B1
FARP2ENSG00000006607.9792.488701044.14730-0.397905.573404.71170HepG2SMN1
FARP2ENSG00000006607.91259.02320885.735100.507302.816502.02870HepG2SNRNP70
FARP2ENSG00000006607.92078.667201695.456100.293904.254803.67240HepG2SRFBP1
FARP2ENSG00000006607.91533.853501169.704600.390905.442104.83530HepG2SRSF1
FARP2ENSG00000006607.91215.881601472.06150-0.275803.153302.61400HepG2SSB
FARP2ENSG00000006607.91214.386901450.41110-0.256203.081702.43220HepG2SUCLG1
FARP2ENSG00000006607.9747.11480985.68240-0.399804.669803.97570HepG2TRIM56
FARP2ENSG00000006607.9755.06220949.71250-0.330901.952501.33570HepG2XRN2
FARP2ENSG00000006607.91516.932901245.074300.284804.013603.38770HepG2ZNF622
FARP2ENSG00000006607.9494.63690856.66230-0.7924011.4208010.36210K562AGGF1
FARP2ENSG00000006607.9436.34530597.76600-0.454104.253902.34650K562AKAP1
FARP2ENSG00000006607.9743.28080941.24160-0.340702.635201.68320K562AKAP8
FARP2ENSG00000006607.9668.68320891.37120-0.414702.716802.06950K562AKAP8L
FARP2ENSG00000006607.9742.85390935.21610-0.332203.162902.18240K562ATP5C1
FARP2ENSG00000006607.91402.314402047.36380-0.546008.194306.55320K562CELF1
FARP2ENSG00000006607.9551.45570698.88500-0.341802.901101.54600K562DDX27
FARP2ENSG00000006607.9486.23660754.21870-0.633305.629304.30090K562EFTUD2
FARP2ENSG00000006607.9605.688601001.60850-0.7257012.0319010.68620K562EIF2S2
FARP2ENSG00000006607.9432.16970569.77270-0.398803.202401.94020K562EIF4B
FARP2ENSG00000006607.91254.065501665.12760-0.409005.588204.27440K562EIF4G2
FARP2ENSG00000006607.9530.45700855.71400-0.689907.244305.80960K562FIP1L1
FARP2ENSG00000006607.9442.82800603.77180-0.447302.656901.55610K562FKBP4
FARP2ENSG00000006607.9968.22070657.996600.557207.152306.24170K562FXR1
FARP2ENSG00000006607.9453.68630647.57960-0.513403.924502.98450K562GPKOW
FARP2ENSG00000006607.9798.886201334.69970-0.7405010.793309.27350K562GRSF1
FARP2ENSG00000006607.9686.70050975.02400-0.505805.268503.79990K562HNRNPA1
FARP2ENSG00000006607.9489.66720695.27580-0.505804.073103.36550K562HNRNPC
FARP2ENSG00000006607.9881.304201191.84860-0.435503.174102.03340K562HNRNPL
FARP2ENSG00000006607.9528.137901079.75530-1.0317021.8756019.53780K562HNRNPU
FARP2ENSG00000006607.9740.406501160.12770-0.647907.047205.78870K562HSPD1
FARP2ENSG00000006607.9700.03450946.05450-0.434504.251903.19790K562KIF1C
FARP2ENSG00000006607.9958.78570785.273300.287902.107701.36940K562MAGOH
FARP2ENSG00000006607.9688.43390905.53640-0.395503.266402.07180K562MAK16
FARP2ENSG00000006607.91256.795501774.86610-0.498005.171103.63170K562MSI2
FARP2ENSG00000006607.9779.99120960.20410-0.299902.805901.99060K562MTPAP
FARP2ENSG00000006607.9911.589301066.84510-0.226902.237201.55920K562NSUN2
FARP2ENSG00000006607.9561.278301068.42610-0.9287011.822208.58470K562PKM
FARP2ENSG00000006607.9645.95820799.69880-0.308002.133501.43060K562POLR2G
FARP2ENSG00000006607.9449.30460733.94110-0.708006.348905.21370K562PRPF8
FARP2ENSG00000006607.9415.13450623.39920-0.586604.362903.18730K562PSIP1
FARP2ENSG00000006607.91038.66760762.933500.445004.456203.63400K562PTBP1
FARP2ENSG00000006607.91234.867801816.78450-0.557006.164004.94790K562PUF60
FARP2ENSG00000006607.91500.218201893.40540-0.335803.969502.81560K562PUM2
FARP2ENSG00000006607.9692.75620884.17300-0.352002.393601.88060K562PUS1
FARP2ENSG00000006607.9707.10970861.34640-0.284702.021301.49990K562RBM15
FARP2ENSG00000006607.9363.68530536.42920-0.560704.343402.62510K562RBM25
FARP2ENSG00000006607.9517.71110747.61440-0.530103.552902.62480K562RPS19
FARP2ENSG00000006607.9371.13590549.79920-0.567004.255502.66180K562SLBP
FARP2ENSG00000006607.9507.87910752.10970-0.566504.420003.10320K562UCHL5
FARP2ENSG00000006607.9974.722801131.20070-0.214801.916901.31090K562UPF1
FARP2ENSG00000006607.9663.39100967.92910-0.545005.743604.46030K562WDR3
FARP2ENSG00000006607.9828.223901419.59050-0.7774011.590109.67820K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FARP2 is not available on ENCORE database.





5 RBPs can affect the splicing of FARP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFARP2ENSG00000006607.9chr2+242334857242335072242312498242312705242343242242343317-0.235000.000230.02535excludedHepG2QKI
SEFARP2ENSG00000006607.9chr2+242344213242344256242343242242343347242346951242347023-0.205000.006980.06112excludedK562AQR
SEFARP2ENSG00000006607.9chr2+242344213242344256242343242242343347242346951242347023-0.414000.000390.00773excludedK562PUS1
A5SSFARP2ENSG00000006607.9chr2+2422957112422958032422957112422957702423124982423127050.234000.000040.00981longerHepG2SFPQ
A5SSFARP2ENSG00000006607.9chr2+2422957112422958032422957112422957702423124982423127050.234000.000050.03411longerHepG2RBFOX2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FARP2 is not avaliable on ENCORE database.