SMPD4

General Information

Gene Name       : SMPD4
Gene ID             : ENSG00000136699.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SMPD4)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SMPD4ENSG00000136699.1914.7930.9222.86ENCSR000AEF
HepG2SMPD4ENSG00000136699.19118.2268.6193.41ENCSR985KAT
K562SMPD4ENSG00000136699.1973.7753.3763.57ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SMPD4 is not avaliable on ENCORE database.



Proteins bound to RNA

  • SMPD4 RNA is bound by 31 proteins.  







eCLIP assay for SMPD4 is not avaliable on ENCORE database.





31 proteins are bound to SMPD4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2130912048130912103-3'-UTR,CDS,intron-Distal,intron-Proximal7.6867334.96825K562SF3B4
chr2130914166130914214-3'-UTR,CDS,intron-Distal,intron-Proximal5.0908011.99167HepG2PPIG
chr2130909721130909813-3'-UTR,intron-Distal,intron-Proximal6.3121419.26644HepG2UPF1
chr2130909670130909736-3'-UTR,intron-Distal,intron-Proximal3.393564.00411HepG2LSM11
chr2130910424130910469-3'-UTR,CDS,intron-Distal4.572515.35117HepG2PRPF8
chr2130912025130912125-3'-UTR,CDS,intron-Distal,intron-Proximal4.367474.28193HepG2AQR
chr2130910016130910029-3'-UTR,intron-Distal3.286905.79072K562YBX3
chr2130909477130909541-3'-UTR,intron-Distal3.046184.96117K562YBX3
chr2130909949130910033-3'-UTR,intron-Distal,intron-Proximal4.492804.54659HepG2G3BP1
chr2130909484130909546-3'-UTR,intron-Distal3.248487.70788HepG2AKAP1
chr2130912054130912102-3'-UTR,CDS,intron-Distal,intron-Proximal4.429247.02300HepG2BUD13
chr2130910428130910485-3'-UTR,CDS,intron-Distal3.470404.44431K562BUD13
chr2130913606130913694-3'-UTR,CDS,intron-Distal,intron-Proximal4.6539919.08121HepG2PPIG
chr2130909960130910058-3'-UTR,intron-Distal,intron-Proximal4.6301211.60568HepG2UPF1
chr2130909670130909721-3'-UTR,intron-Distal5.5667412.32677HepG2UPF1
chr2130909970130910028-3'-UTR,intron-Distal,intron-Proximal3.344803.77005HepG2AKAP1
chr2130909477130909544-3'-UTR,intron-Distal6.0602516.07924K562UPF1
chr2130912784130912833-3'-UTR,CDS,intron-Distal,intron-Proximal4.5727410.78364HepG2PPIG
chr2130910891130910944-3'-UTR,CDS,intron-Distal,intron-Proximal4.350444.67299K562DDX24
chr2130909992130910016-3'-UTR,intron-Distal,intron-Proximal3.371596.00087K562YBX3
chr2130910666130910724-3'-UTR,CDS,intron-Distal,intron-Proximal4.366874.69071HepG2GRWD1
chr2130918714130918771-3'-UTR,CDS,intron-Distal,intron-Proximal3.155694.98485HepG2PRPF8
chr2130911846130911885-3'-UTR,CDS,intron-Distal,intron-Proximal3.298093.97821HepG2PABPN1
chr2130910134130910184-3'-UTR,CDS,intron-Distal3.163523.44343HepG2AKAP1
chr2130910892130910943-3'-UTR,CDS,intron-Distal,intron-Proximal3.505163.99124HepG2PPIG
chr2130934126130934195-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.040608.84267HepG2GRWD1
chr2130910170130910221-3'-UTR,CDS,intron-Distal,intron-Proximal4.696525.94150HepG2UPF1
chr2130909031130909099-3'-UTR,intron-Distal3.785429.72842K562UPF1
chr2130910652130910723-3'-UTR,CDS,intron-Distal,intron-Proximal3.3916410.37782HepG2PPIG
chr2130911809130911857-3'-UTR,CDS,intron-Distal,intron-Proximal3.406525.62208HepG2PRPF8
chr2130910961130911024-3'-UTR,CDS,intron-Distal,intron-Proximal3.521677.63733HepG2PPIG
chr2130918831130918845-3'-UTR,CDS,intron-Distal3.752895.40651HepG2PPIG
chr2130910660130910738-3'-UTR,CDS,intron-Distal,intron-Proximal3.023745.30074HepG2PABPN1
chr2130924989130925058-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.4463810.11149HepG2PRPF8
chr2130911491130911560-3'-UTR,CDS,intron-Distal,intron-Proximal7.1978925.53172K562SF3B4
chr2130909682130909731-3'-UTR,intron-Distal4.491214.34093HepG2RBM15
chr2130912051130912109-3'-UTR,CDS,intron-Distal,intron-Proximal3.556813.75245K562BUD13
chr2130909486130909548-3'-UTR,intron-Distal4.2025710.93151HepG2UPF1
chr2130909889130909960-3'-UTR,intron-Distal,intron-Proximal5.3524910.94465HepG2UPF1
chr2130909740130909797-3'-UTR,intron-Distal,intron-Proximal5.7844013.05029K562UPF1
chr2130918826130918885-3'-UTR,CDS,intron-Distal,intron-Proximal3.518663.89405HepG2PTBP1
chr2130910577130910624-3'-UTR,CDS,intron-Distal,intron-Proximal4.100035.64484HepG2PRPF8
chr2130912036130912101-3'-UTR,CDS,intron-Distal,intron-Proximal4.374884.98250K562AQR
chr2130921945130922005-3'-UTR,CDS,intron-Distal,intron-Proximal3.8524510.57119HepG2PPIG
chr2130909675130909734-3'-UTR,intron-Distal3.971296.88718HepG2AKAP1
chr2130921949130922010-3'-UTR,5'-UTR,CDS,intron-Distal3.189675.74981HepG2GRWD1
chr2130934131130934192-3'-UTR,5'-UTR,CDS,intron-Distal3.821649.86479HepG2PPIG
chr2130909840130909889-3'-UTR,intron-Distal,intron-Proximal4.899047.45692HepG2UPF1
chr2130909671130909740-3'-UTR,intron-Distal,intron-Proximal4.7288815.13329K562UPF1
chr2130912052130912105-3'-UTR,CDS,intron-Distal,intron-Proximal6.3978420.95083HepG2SF3B4
chr2130910846130910917-3'-UTR,CDS,intron-Distal,intron-Proximal3.797846.65114HepG2PRPF8
chr2130909734130909798-3'-UTR,intron-Distal,intron-Proximal5.084177.78976HepG2AKAP1
chr2130930357130930398-5'-UTR,CDS,intron-Distal,intron-Proximal3.781186.70085HepG2PPIG
chr2130930038130930074-5'-UTR,CDS,intron-Distal,intron-Proximal3.086014.45734K562IGF2BP1
chr2130930823130930871-5'-UTR,CDS,intron-Distal,intron-Proximal5.107704.02817HepG2PRPF8
chr2130930196130930227-5'-UTR,CDS,intron-Distal,intron-Proximal3.167595.50923K562IGF2BP1
chr2130932548130932573-5'-UTR,CDS,intron-Distal3.983074.04622HepG2GRWD1
chr2130930018130930028-5'-UTR,CDS,intron-Distal3.262837.42778K562YBX3
chr2130930466130930520-5'-UTR,CDS,intron-Distal,intron-Proximal4.705717.39218K562SF3B4
chr2130932448130932501-5'-UTR,CDS,intron-Distal,intron-Proximal5.629325.68502HepG2PRPF8
chr2130929920130929929-5'-UTR,CDS,intron-Distal,intron-Proximal3.225844.61826K562IGF2BP2
chr2130930377130930423-5'-UTR,CDS,intron-Distal,intron-Proximal3.059073.60157HepG2GRWD1
chr2130932450130932488-5'-UTR,CDS,intron-Distal,intron-Proximal4.495623.12843K562PRPF8
chr2130931085130931167-5'-UTR,CDS,intron-Distal,intron-Proximal4.030573.39686HepG2G3BP1
chr2130925136130925164-5'-UTR,CDS,intron-Distal,intron-Proximal3.663503.38325HepG2IGF2BP1
chr2130932484130932548-5'-UTR,CDS,intron-Distal,intron-Proximal3.283794.24070HepG2GRWD1
chr2130930906130930928-5'-UTR,CDS,intron-Distal,intron-Proximal3.695874.96634HepG2PPIG
chr2130938958130939065-5'-UTR,intron-Distal5.158407.25096HepG2RBM22
chr2130921530130921562-intron-Distal5.9390665.01916HepG2RBFOX2
chr2130929620130929648-intron-Distal3.119573.48223HepG2RBFOX2
chr2130916668130916721-intron-Distal3.7211010.41778HepG2ILF3
chr2130921187130921253-intron-Distal3.6348410.39620HepG2DROSHA
chr2130930073130930178-intron-Distal,intron-Proximal3.497354.83282K562EFTUD2
chr2130921308130921370-intron-Distal3.8025012.31263K562RBFOX2
chr2130912664130912669-intron-Distal,intron-Proximal4.009229.84476K562AQR
chr2130918432130918551-intron-Distal4.189963.54147K562HNRNPM
chr2130919648130919688-intron-Distal3.876155.86205K562DROSHA
chr2130919811130919823-intron-Distal9.46328211.49104HepG2RBFOX2
chr2130919798130919846-intron-Distal3.673594.49762HepG2XRN2
chr2130921492130921573-intron-Distal4.422718.83628K562DROSHA
chr2130921370130921445-intron-Distal4.8737018.45125K562RBFOX2
chr2130912612130912664-intron-Distal,intron-Proximal4.1720615.70038K562AQR
chr2130912623130912660-intron-Distal,intron-Proximal4.177674.16174HepG2PRPF8
chr2130919789130919879-intron-Distal6.1945784.59901K562DROSHA
chr2130918861130918934-intron-Distal,intron-Proximal5.1411923.30918HepG2PCBP2
chr2130921573130921699-intron-Distal5.4312414.19754K562DROSHA
chr2130919097130919163-intron-Distal5.9924615.51271K562XRN2
chr2130919124130919145-intron-Distal4.354414.62429HepG2NKRF
chr2130930475130930537-intron-Distal,intron-Proximal4.728595.79972HepG2RBFOX2
chr2130921595130921641-intron-Distal7.1986986.79242HepG2RBFOX2
chr2130919782130919875-intron-Distal6.0757555.80243HepG2DROSHA
chr2130919791130919811-intron-Distal9.05159154.84960HepG2RBFOX2
chr2130919789130919892-intron-Distal5.6481512.10058K562DDX6
chr2130921306130921368-intron-Distal5.2460233.80743HepG2DDX6
chr2130919363130919411-intron-Distal3.044003.84191HepG2DROSHA
chr2130919791130919878-intron-Distal5.1603819.40661HepG2DDX6
chr2130911818130911850-intron-Distal,intron-Proximal3.385416.16312K562AQR
chr2130911517130911576-intron-Distal,intron-Proximal4.7952111.25257HepG2SF3B4
chr2130918492130918555-intron-Distal3.209293.15971K562ILF3
chr2130921662130921711-intron-Distal5.3580357.30137HepG2RBFOX2
chr2130924952130925020-intron-Distal,intron-Proximal3.684344.57180HepG2AQR
chr2130915653130915680-intron-Distal,intron-Proximal3.106726.82667HepG2ILF3
chr2130921521130921555-intron-Distal5.3803010.43082HepG2DDX6
chr2130919789130919877-intron-Distal6.7571031.23594K562RBFOX2
chr2130930476130930534-intron-Distal,intron-Proximal3.847563.25923K562RBFOX2
chr2130920465130920503-intron-Distal3.523429.86925HepG2DROSHA
chr2130919785130919863-intron-Distal3.7644217.58616HepG2PRPF8
chr2130919644130919700-intron-Distal4.3417818.29057HepG2DROSHA
chr2130920691130920763-intron-Distal3.941753.82910K562NONO
chr2130920459130920506-intron-Distal5.3726310.99341HepG2DDX6
chr2130919823130919878-intron-Distal9.78081267.86747HepG2RBFOX2
chr2130918885130918949-intron-Distal,intron-Proximal4.422344.07628HepG2PTBP1
chr2130918480130918524-intron-Distal4.015433.76710K562NONO
chr2130921840130921910-intron-Distal,intron-Proximal3.112533.31456K562TIA1
chr2130912056130912116-intron-Distal,intron-Proximal4.6418410.37483HepG2SF3A3
chr2130920456130920506-intron-Distal3.881283.48745HepG2ILF3
chr2130911560130911575-intron-Distal,intron-Proximal6.3495511.49904K562SF3B4
chr2130921313130921368-intron-Distal3.328468.45537HepG2PRPF8
chr2130919037130919090-intron-Distal5.0669831.11297HepG2RBFOX2
chr2130921558130921640-intron-Distal4.3985514.97420HepG2DROSHA
chr2130912060130912101-intron-Distal,intron-Proximal3.334663.18246K562PRPF8
chr2130921863130921914-intron-Distal,intron-Proximal4.612478.09569HepG2RBM22
chr2130924942130925001-intron-Distal,intron-Proximal5.3003822.84345HepG2RBM22
chr2130920686130920720-intron-Distal8.0980778.81945HepG2RBFOX2
chr2130930083130930159-intron-Distal,intron-Proximal6.6904114.89918HepG2EFTUD2
chr2130921493130921530-intron-Distal6.4559096.85532HepG2RBFOX2
chr2130921368130921450-intron-Distal4.7674758.42865HepG2DDX6
chr2130920610130920672-intron-Distal4.1183310.32551HepG2DROSHA
chr2130921487130921593-intron-Distal3.446059.62322K562RBFOX2
chr2130919278130919335-intron-Distal3.838053.69388HepG2XPO5
chr2130914750130914824-intron-Distal,intron-Proximal4.312117.15298K562AQR
chr2130916377130916450-intron-Distal3.450835.26902HepG2XPO5
chr2130918649130918759-intron-Distal,intron-Proximal3.860595.75231K562AQR
chr2130919031130919086-intron-Distal3.786283.48123K562XRN2
chr2130921474130921493-intron-Distal7.5105944.66258HepG2RBFOX2
chr2130913710130913754-intron-Distal,intron-Proximal4.159485.68247K562SF3B4
chr2130919641130919695-intron-Distal5.3034340.12531HepG2RBFOX2
chr2130921390130921407-intron-Distal6.63444400.00000HepG2RBFOX2
chr2130921641130921662-intron-Distal5.9944371.88510HepG2RBFOX2
chr2130930266130930324-intron-Distal,intron-Proximal4.110013.14375HepG2RBFOX2
chr2130921295130921440-intron-Distal5.7553640.89096HepG2DROSHA
chr2130921613130921725-intron-Distal3.220977.94773HepG2NKRF
chr2130911808130911818-intron-Distal,intron-Proximal4.395796.77156K562AQR
chr2130921371130921390-intron-Distal6.12674400.00000HepG2RBFOX2
chr2130912660130912669-intron-Distal,intron-Proximal3.993163.56873HepG2PRPF8
chr2130921602130921693-intron-Distal3.066293.86003HepG2XRN2
chr2130914973130915059-intron-Distal,intron-Proximal3.829759.53465HepG2SF3B4
chr2130921309130921368-intron-Distal6.58533400.00000HepG2RBFOX2
chr2130910495130910542-intron-Distal,intron-Proximal3.364993.56873HepG2PRPF8
chr2130921311130921451-intron-Distal4.5511040.73396K562DROSHA
chr2130921321130921467-intron-Distal3.523537.50682K562DDX6
chr2130913950130914006-intron-Distal4.308433.02181K562PRPF8
chr2130921407130921468-intron-Distal7.06622400.00000HepG2RBFOX2
chr2130914970130915017-intron-Distal,intron-Proximal4.7767213.51191K562SF3B4
chr2130920720130920734-intron-Distal6.4187371.97691HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SMPD4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SMPD4 is not available on ENCORE database.

  • 103 RBPs can affect the levels of SMPD4.  








The Knockdown/knockout RNA-Seq assay for SMPD4 is not available on ENCORE database.





103 RBPs can affect the gene expression of SMPD4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SMPD4ENSG00000136699.151697.136802252.71760-0.408603.870102.61670HepG2AATF
SMPD4ENSG00000136699.153450.814404004.62620-0.214703.318402.66300HepG2ACO1
SMPD4ENSG00000136699.153116.330804023.14040-0.368507.289606.11040HepG2AKAP8L
SMPD4ENSG00000136699.152309.987403158.97620-0.451602.495101.74620HepG2ASCC1
SMPD4ENSG00000136699.152902.058205161.03300-0.8306034.0386032.10680HepG2AUH
SMPD4ENSG00000136699.152110.376403583.48870-0.7639017.4824015.85020HepG2CALR
SMPD4ENSG00000136699.153315.678504003.39440-0.271905.572904.68900HepG2CKAP4
SMPD4ENSG00000136699.152354.657103403.28700-0.531406.693705.65940HepG2CPSF6
SMPD4ENSG00000136699.151566.081602307.35150-0.559103.398101.83510HepG2CSTF2T
SMPD4ENSG00000136699.153618.269404018.79720-0.151501.968801.32740HepG2DAZAP1
SMPD4ENSG00000136699.152929.875202462.378300.250702.846001.67040HepG2DDX1
SMPD4ENSG00000136699.151759.407402483.47940-0.497306.036105.07870HepG2DDX21
SMPD4ENSG00000136699.151837.052902431.89330-0.404704.762003.55160HepG2DDX24
SMPD4ENSG00000136699.152663.716502393.285200.154301.876101.32080HepG2DNAJC2
SMPD4ENSG00000136699.151601.611702288.28580-0.514703.599102.32540HepG2AGO1
SMPD4ENSG00000136699.151978.782102603.65370-0.395903.600102.57660HepG2EIF3D
SMPD4ENSG00000136699.153225.280203964.76770-0.297804.724703.67630HepG2EIF4G1
SMPD4ENSG00000136699.152337.536602778.36840-0.249202.189401.48280HepG2FUBP3
SMPD4ENSG00000136699.154655.184703368.451600.466704.095603.26580HepG2FXR1
SMPD4ENSG00000136699.152779.404103857.65390-0.472904.401003.60570HepG2GPKOW
SMPD4ENSG00000136699.153104.204803693.37720-0.250702.982802.01760HepG2HNRNPA2B1
SMPD4ENSG00000136699.154067.201903165.339100.361602.351401.70540HepG2HNRNPK
SMPD4ENSG00000136699.153012.015503681.45160-0.289502.249001.67570HepG2HNRNPLL
SMPD4ENSG00000136699.153127.692302693.501300.215502.911402.29100HepG2HNRNPU
SMPD4ENSG00000136699.153139.529704286.59370-0.449306.551105.35790HepG2MSI2
SMPD4ENSG00000136699.153263.597302402.380300.441906.151105.08550HepG2PPIL4
SMPD4ENSG00000136699.152047.681703725.66060-0.8635033.2724031.19060HepG2PRPF4
SMPD4ENSG00000136699.151450.890502197.29590-0.598802.772301.96250HepG2PRPF8
SMPD4ENSG00000136699.153383.059604035.21650-0.254302.729702.06320HepG2PUM2
SMPD4ENSG00000136699.152988.320103637.40070-0.283603.378902.69770HepG2QKI
SMPD4ENSG00000136699.151631.433302589.60400-0.666601.938301.33790HepG2RAVER1
SMPD4ENSG00000136699.153741.492501510.696201.308304.996002.49270HepG2RBM17
SMPD4ENSG00000136699.152151.088704952.81440-1.2032055.6711053.92960HepG2RBM22
SMPD4ENSG00000136699.154503.571003737.855200.268804.368903.71700HepG2NELFE
SMPD4ENSG00000136699.153966.049003481.418600.187902.434601.85170HepG2RECQL
SMPD4ENSG00000136699.153181.209004091.59490-0.363103.854003.06890HepG2RPLP0
SMPD4ENSG00000136699.151498.346702173.42220-0.536602.383201.64730HepG2RRP9
SMPD4ENSG00000136699.152893.395502398.656300.270404.567103.77350HepG2SAFB2
SMPD4ENSG00000136699.153168.167501459.033101.118503.938202.25350HepG2SF1
SMPD4ENSG00000136699.153158.399602797.195200.175102.575001.95080HepG2SMN1
SMPD4ENSG00000136699.153076.993901304.854801.237505.107503.18780HepG2SNRNP200
SMPD4ENSG00000136699.152079.419204054.38550-0.963309.959408.48300HepG2SNRNP70
SMPD4ENSG00000136699.153776.393405593.93600-0.5669021.5315020.47880HepG2SRFBP1
SMPD4ENSG00000136699.153276.956803731.43000-0.187402.459301.79960HepG2SRSF7
SMPD4ENSG00000136699.151818.098102969.40750-0.7077023.4545022.13940HepG2SRSF9
SMPD4ENSG00000136699.154187.561204856.71140-0.213903.361202.80820HepG2SSB
SMPD4ENSG00000136699.151840.243302837.13220-0.624502.627201.96590HepG2SUPV3L1
SMPD4ENSG00000136699.151874.771003280.79530-0.8073023.1180021.71750HepG2TAF15
SMPD4ENSG00000136699.152720.981103588.90410-0.399404.208703.33820HepG2TARDBP
SMPD4ENSG00000136699.151970.564102617.07600-0.409305.593904.93150HepG2TIAL1
SMPD4ENSG00000136699.153257.857102640.646600.302905.116304.39710HepG2TRIM56
SMPD4ENSG00000136699.154601.267203716.383700.308003.426702.44170HepG2TUFM
SMPD4ENSG00000136699.153155.724001516.638101.057003.665302.52610HepG2U2AF2
SMPD4ENSG00000136699.153492.334004349.10360-0.316506.474605.48030HepG2UPF1
SMPD4ENSG00000136699.153024.665303676.75340-0.281705.621004.71530HepG2ZC3H8
SMPD4ENSG00000136699.153487.243504783.19140-0.4559016.2479015.19760HepG2ZNF622
SMPD4ENSG00000136699.154669.093203091.701600.5946019.1527017.77970K562AGGF1
SMPD4ENSG00000136699.154527.244903217.061600.492806.494505.46100K562AKAP8L
SMPD4ENSG00000136699.154880.987303926.221600.313903.083102.47050K562AQR
SMPD4ENSG00000136699.151890.385102415.39970-0.353602.909902.01760K562BOP1
SMPD4ENSG00000136699.151969.403302568.26070-0.383004.546003.54220K562CPSF6
SMPD4ENSG00000136699.155216.214106327.98600-0.278703.504302.40440K562CELF1
SMPD4ENSG00000136699.153421.183104365.52100-0.351706.975206.00590K562DDX47
SMPD4ENSG00000136699.154053.336503461.751400.227502.860901.96890K562DKC1
SMPD4ENSG00000136699.153011.725502093.412900.524603.200901.81550K562EEF2
SMPD4ENSG00000136699.152505.333202022.322800.308902.132501.33030K562EFTUD2
SMPD4ENSG00000136699.153005.787003619.75160-0.268103.644202.83860K562EIF2S2
SMPD4ENSG00000136699.151391.976201117.573600.316703.155702.30800K562EIF3G
SMPD4ENSG00000136699.152464.331902002.721300.299103.233701.81510K562EWSR1
SMPD4ENSG00000136699.151382.551202207.50690-0.675108.037305.96260K562FKBP4
SMPD4ENSG00000136699.152069.598902613.14860-0.336402.997202.10500K562FMR1
SMPD4ENSG00000136699.153100.015102386.032600.377606.244005.38990K562FXR1
SMPD4ENSG00000136699.15512.854701077.97320-1.071706.103404.96530K562G3BP2
SMPD4ENSG00000136699.153712.031104823.44540-0.377904.738803.75050K562GRSF1
SMPD4ENSG00000136699.152971.781603550.02370-0.256502.373401.38240K562HNRNPA1
SMPD4ENSG00000136699.151623.921402541.73240-0.6463010.844709.72750K562HNRNPC
SMPD4ENSG00000136699.152881.558104090.72200-0.505506.246605.06280K562HSPD1
SMPD4ENSG00000136699.152458.583301677.577100.551302.304501.39240K562IGF2BP2
SMPD4ENSG00000136699.154219.740403414.085600.305602.999302.13860K562KIF1C
SMPD4ENSG00000136699.151359.473302093.75400-0.623005.293303.94830K562KRR1
SMPD4ENSG00000136699.152673.351701761.928700.601405.689704.47260K562MAGOH
SMPD4ENSG00000136699.154540.696203824.641100.247502.363501.53270K562MBNL1
SMPD4ENSG00000136699.153387.436003806.83380-0.168402.073901.36870K562MTPAP
SMPD4ENSG00000136699.153712.108502680.798300.469503.528002.50510K562NAA15
SMPD4ENSG00000136699.153798.004904229.83630-0.155402.689501.95270K562NSUN2
SMPD4ENSG00000136699.153198.476201736.455800.881104.651503.27650K562PABPN1
SMPD4ENSG00000136699.152307.968001722.817600.421803.821202.22300K562PCBP1
SMPD4ENSG00000136699.153568.384402063.666700.790003.271101.63180K562PPP1R8
SMPD4ENSG00000136699.152605.429701967.966800.404703.564902.71200K562PRPF8
SMPD4ENSG00000136699.152528.161601711.909200.562408.306607.19710K562PTBP1
SMPD4ENSG00000136699.155121.548005972.61470-0.221802.306301.34030K562PUM1
SMPD4ENSG00000136699.155008.911705851.77000-0.224402.916501.93210K562PUM2
SMPD4ENSG00000136699.155643.325303190.400100.822709.978908.99490K562PUS1
SMPD4ENSG00000136699.154948.413603108.599300.6706017.8604016.32870K562RBM15
SMPD4ENSG00000136699.152620.454902079.600800.333403.568702.44370K562RCC2
SMPD4ENSG00000136699.153575.057102863.307100.320203.303102.12090K562SAFB
SMPD4ENSG00000136699.153369.160801587.572301.085505.178003.37090K562SF1
SMPD4ENSG00000136699.153029.606304173.61720-0.462209.992408.51130K562SF3A3
SMPD4ENSG00000136699.151632.124401119.980500.543206.475705.12860K562SF3B4
SMPD4ENSG00000136699.153540.906701934.755000.871904.298602.52850K562SFPQ
SMPD4ENSG00000136699.15759.387401026.21430-0.434403.012201.35200K562SND1
SMPD4ENSG00000136699.153267.037101823.946400.840803.967802.40430K562SNRNP200
SMPD4ENSG00000136699.152413.078201971.373500.291602.392501.45620K562SRFBP1
SMPD4ENSG00000136699.153073.374701678.369600.8727016.3811014.66820K562SRSF1
SMPD4ENSG00000136699.153892.769803222.979700.272302.971802.11750K562SYNCRIP
SMPD4ENSG00000136699.15675.377401058.08060-0.647702.900601.39010K562TAF15
SMPD4ENSG00000136699.152232.555201698.344100.394502.540601.86100K562TARDBP
SMPD4ENSG00000136699.152192.620501638.317000.420303.738602.76680K562TIA1
SMPD4ENSG00000136699.152153.417301608.328400.421003.301102.08940K562TRA2A
SMPD4ENSG00000136699.152863.759902329.038300.298102.606201.69360K562TRIM56
SMPD4ENSG00000136699.154374.203205087.93800-0.218102.962301.64820K562TROVE2
SMPD4ENSG00000136699.153137.222004117.42330-0.392303.062401.79240K562UTP3
SMPD4ENSG00000136699.153326.986903990.63720-0.262404.838603.74720K562WDR43
SMPD4ENSG00000136699.153599.392104651.42980-0.369904.472702.82090K562WRN
SMPD4ENSG00000136699.153553.374504423.22530-0.315903.129502.20500K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SMPD4 is not available on ENCORE database.





55 RBPs can affect the splicing of SMPD4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.333000.000000.00000includedHepG2G3BP1
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.114000.000690.01535excludedK562SRSF1
SESMPD4ENSG00000136699.15chr2-1309187581309188451309148231309149691309219461309220180.388000.000000.00000includedHepG2U2AF1
SESMPD4ENSG00000136699.15chr2-130930851130930927130930359130930468130931086130931177-0.071000.000260.02980excludedHepG2PRPF8
SESMPD4ENSG00000136699.15chr2-130918758130918845130914823130914969130921946130922018-0.129000.000420.01571excludedK562AKAP8L
SESMPD4ENSG00000136699.15chr2-1309157561309158381309148231309149691309219461309220180.158000.000110.03469includedHepG2ILF3
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.212000.000010.00200includedK562FMR1
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.155000.000040.01740excludedK562WDR43
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.240000.000000.00007includedHepG2HNRNPK
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.196000.000360.03599includedHepG2QKI
SESMPD4ENSG00000136699.15chr2-1309187581309188451309148231309149691309219461309220180.247000.000000.00000includedHepG2U2AF2
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.186000.000000.00446includedHepG2SUGP2
SESMPD4ENSG00000136699.15chr2-1309123541309124731309118491309120551309126681309128320.081000.000000.00000includedK562AQR
SESMPD4ENSG00000136699.15chr2-130914823130914969130914157130914248130921946130922018-0.117000.000000.00008excludedK562AQR
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.170000.000030.00592includedHepG2SRSF7
SESMPD4ENSG00000136699.15chr2-130918758130918845130914823130914969130921946130922018-0.205000.000000.00000excludedK562PUS1
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.177000.000000.00137excludedK562MTPAP
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.251000.000630.04058includedHepG2NCBP2
SESMPD4ENSG00000136699.15chr2-130917085130917207130914823130914969130918758130918845-0.051000.000910.05248excludedHepG2NCBP2
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.223000.000000.00191includedHepG2EFTUD2
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.179000.000060.08740includedK562DHX30
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.218000.000160.01198includedHepG2PTBP1
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.154000.000130.06875includedHepG2UPF1
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.136000.000000.00000includedHepG2FTO
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.155000.001500.05709includedHepG2MATR3
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.200000.001700.03459includedK562U2AF1
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.138000.000130.02110includedHepG2LARP4
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.307000.000000.00000excludedHepG2HNRNPL
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.183000.000010.00135excludedK562HNRNPL
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.347000.000000.00000excludedHepG2SRSF1
SESMPD4ENSG00000136699.15chr2-130930851130930927130930359130930468130931086130931229-0.058000.000100.00462excludedHepG2SF3A3
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.191000.000020.00438includedHepG2SSB
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.228000.000040.00642includedHepG2IGF2BP3
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.304000.000250.02511excludedK562HNRNPUL1
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.152000.000010.01335includedK562PUM2
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.234000.000310.04128excludedHepG2RBFOX2
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.287000.000000.00001includedHepG2SUPV3L1
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.232000.000000.00018includedK562EIF4G2
SESMPD4ENSG00000136699.15chr2-130918758130918845130914823130914969130921946130922018-0.192000.000000.00001excludedK562UTP18
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.240000.000090.01563includedHepG2TAF15
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.149000.000040.00276excludedK562TARDBP
SESMPD4ENSG00000136699.15chr2-130930851130930927130930359130930468130931086130931177-0.071000.000550.02370excludedK562TARDBP
SESMPD4ENSG00000136699.15chr2-130918663130918845130914823130914969130921946130922018-0.085000.001310.04598excludedK562HNRNPU
SESMPD4ENSG00000136699.15chr2-130918758130918845130914823130914969130921946130922018-0.212000.000000.00000excludedK562RBM15
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.207000.000040.01782includedHepG2EIF3D
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.192000.000250.01372includedK562SF3B1
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.191000.000280.05982excludedHepG2XRCC6
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.182000.000320.01589excludedHepG2HNRNPC
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.211000.000000.00084includedHepG2PRPF4
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.362000.000000.00000includedHepG2KHSRP
SESMPD4ENSG00000136699.15chr2-130918758130918845130914933130914969130921946130922018-0.342000.000140.03317excludedK562NPM1
SESMPD4ENSG00000136699.15chr2-1309170851309172071309148231309149691309187581309188450.276000.001870.03224includedK562HNRNPC
SESMPD4ENSG00000136699.15chr2-130914823130914969130914157130914248130921946130922018-0.198000.000000.00001excludedK562HNRNPC
A3SSSMPD4ENSG00000136699.15chr2-1309141571309143861309141571309142481309148231309149690.103000.000390.03409longerHepG2SF3A3
A3SSSMPD4ENSG00000136699.15chr2-1309126681309128841309126681309128321309136071309137410.200000.000000.00000longerK562AQR
A3SSSMPD4ENSG00000136699.15chr2-1309136071309138481309136071309137081309141571309142480.174000.000000.00000longerK562AQR
A3SSSMPD4ENSG00000136699.15chr2-1309119271309121161309119271309120551309126681309128320.215000.000000.00000longerK562AQR
A3SSSMPD4ENSG00000136699.15chr2-1309308511309310041309308511309309271309310861309312290.059000.000000.00004longerK562AQR
A3SSSMPD4ENSG00000136699.15chr2-1309141571309143861309141571309142481309148231309149950.301000.000000.00000longerK562AQR
A3SSSMPD4ENSG00000136699.15chr2-1309141571309143861309141571309142481309148231309149690.125000.001080.04272longerHepG2U2AF1
A5SSSMPD4ENSG00000136699.15chr2-130929921130930065130930011130930065130925030130925163-0.073000.000000.00011shorterK562AQR
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.179000.000160.00401includedK562SF3B4
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.244000.000000.00000includedK562PUS1
RISMPD4ENSG00000136699.15chr2-1309136071309142481309136071309137081309141571309142480.090000.001100.00812includedK562PUS1
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.103000.000000.00000includedHepG2SF3A3
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.053000.000040.00862includedHepG2PRPF4
RISMPD4ENSG00000136699.15chr2-130911849130912832130911849130912055130912668130912832-0.082000.000600.01652excludedK562SRSF1
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.170000.000000.00000includedK562AGGF1
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.107000.000080.00337includedHepG2IGF2BP3
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.185000.000000.00000includedK562AKAP8L
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.060000.000040.00078includedHepG2TAF15
RISMPD4ENSG00000136699.15chr2-1309136071309142481309136071309137081309141571309142480.102000.000290.00438includedHepG2TAF15
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.121000.000000.00000includedK562RBM15
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.070000.000000.00001includedHepG2SF3B4
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.149000.000000.00000includedHepG2RBM22
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.071000.000090.00197includedK562UTP18
RISMPD4ENSG00000136699.15chr2-1309136071309142481309136071309137081309141571309142480.083000.009330.08356includedK562UTP18
RISMPD4ENSG00000136699.15chr2-1309136071309142481309136071309137081309141571309142480.224000.000000.00000includedK562AQR
RISMPD4ENSG00000136699.15chr2-1309118491309128321309118491309120551309126681309128320.334000.000000.00000includedK562AQR
RISMPD4ENSG00000136699.15chr2-1309136071309142481309136071309137081309141571309142480.057000.003080.08741includedHepG2XRN2
MXESMPD4ENSG00000136699.15chr2-130925030130925163130932486130932573130921946130922018130934126130934210-0.097000.000000.000002includedHepG2FTO
MXESMPD4ENSG00000136699.15chr2-130930851130930927130931086130931229130930359130930468130932486130932573-0.336000.001980.029022includedK562DROSHA
MXESMPD4ENSG00000136699.15chr2-1309136071309137081309141571309142481309126681309128321309219461309220180.098000.000250.002671includedK562AQR
MXESMPD4ENSG00000136699.15chr2-130914157130914248130918758130918845130913607130913708130921946130922018-0.103000.003440.083662includedHepG2SF3A3
MXESMPD4ENSG00000136699.15chr2-130925030130925163130932486130932573130921946130922018130934126130934210-0.118000.012030.091212includedHepG2SFPQ
MXESMPD4ENSG00000136699.15chr2-130925030130925163130932486130932573130921946130922018130934126130934210-0.228000.000000.000002includedHepG2U2AF2
MXESMPD4ENSG00000136699.15chr2-130930197130930250130932486130932573130925030130925163130934126130934210-0.212000.002920.019692includedHepG2U2AF2
MXESMPD4ENSG00000136699.15chr2-130914823130914969130921946130922018130914157130914248130925030130925163-0.158000.000000.005162includedK562DDX21
MXESMPD4ENSG00000136699.15chr2-1309250301309251631309324861309325731309219461309220181309341261309342100.113000.000170.048191includedHepG2CDC40
MXESMPD4ENSG00000136699.15chr2-130925030130925163130932486130932573130921946130922018130934126130934210-0.131000.006060.072152includedHepG2HNRNPUL1
MXESMPD4ENSG00000136699.15chr2-1309250301309251631309299211309300731309219461309220181309301971309302500.113000.000050.010801includedK562ZNF800
MXESMPD4ENSG00000136699.15chr2-1309141571309142481309187581309188451309136071309137081309219461309220180.217000.000000.000001includedK562PPIL4
MXESMPD4ENSG00000136699.15chr2-130925030130925163130932486130932573130921946130922018130934126130934210-0.190000.000000.000012includedK562DHX30
MXESMPD4ENSG00000136699.15chr2-130925030130925163130932486130932573130921946130922018130934126130934210-0.139000.000800.081522includedHepG2XRCC6
MXESMPD4ENSG00000136699.15chr2-130911849130911927130911927130912055130911274130911508130912668130912832-0.326000.000000.000042includedK562SF3B4
MXESMPD4ENSG00000136699.15chr2-130914823130914969130921946130922018130914157130914248130925030130925163-0.142000.000040.012002includedK562NPM1
MXESMPD4ENSG00000136699.15chr2-130914823130914969130918758130918845130914157130914386130921946130922018-0.302000.000260.038442includedK562NPM1
MXESMPD4ENSG00000136699.15chr2-1309219461309220181309250301309251631309148231309149691309324861309325730.079000.000900.077461includedK562FMR1
MXESMPD4ENSG00000136699.15chr2-130930851130930927130931086130931229130930359130930468130932486130932573-0.302000.005450.066892includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SMPD4 is not avaliable on ENCORE database.