HMBOX1

General Information

Gene Name       : HMBOX1
Gene ID             : ENSG00000147421.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HMBOX1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HMBOX1ENSG00000147421.178.3511.069.71ENCSR000AEF
HepG2HMBOX1ENSG00000147421.1710.399.6110.00ENCSR985KAT
K562HMBOX1ENSG00000147421.1722.7322.8722.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HMBOX1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HMBOX1 RNA is bound by 47 proteins.  







eCLIP assay for HMBOX1 is not avaliable on ENCORE database.





47 proteins are bound to HMBOX1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr82890853028908600+3'-UTR,CDS,intron-Distal,intron-Proximal3.557414.06531HepG2GRWD1
chr82887635328876418+3'-UTR,CDS4.1909210.03782K562ZNF622
chr82890490928904973+3'-UTR,CDS,intron-Distal,intron-Proximal3.174865.29017HepG2BCLAF1
chr82890683628906913+3'-UTR,CDS,intron-Distal,intron-Proximal3.966159.52225K562UCHL5
chr82890680728906913+3'-UTR,CDS,intron-Distal,intron-Proximal4.324054.35343K562SRSF1
chr82890666128906721+3'-UTR,intron-Distal,intron-Proximal4.190867.95645K562EFTUD2
chr82890647228906565+3'-UTR,CDS,intron-Proximal3.6454712.25516K562ZNF622
chr82890647028906537+3'-UTR,CDS,intron-Proximal3.371868.66760K562UCHL5
chr82892213928922230+3'-UTR3.563215.78005K562KHSRP
chr82890856428908648+3'-UTR,CDS,intron-Distal3.1849314.28909K562ZNF622
chr82890851428908594+3'-UTR,CDS,intron-Distal,intron-Proximal3.147204.07145K562U2AF2
chr82890662928906716+3'-UTR,intron-Distal,intron-Proximal4.700666.67793HepG2EFTUD2
chr82892214828922185+3'-UTR3.842193.01017K562CPSF6
chr82890968128909692+3'-UTR,intron-Distal3.949863.02850K562YBX3
chr82890847228908576+3'-UTR,CDS,intron-Distal,intron-Proximal3.052999.78553K562SF3B4
chr82892218528922270+3'-UTR5.045688.19923K562CPSF6
chr82887635828876410+3'-UTR,CDS4.256573.14999HepG2GRWD1
chr82890292128902960+3'-UTR,CDS3.037053.90681K562DDX24
chr82887637928876429+3'-UTR,CDS5.395839.06345K562UCHL5
chr82890490828904971+3'-UTR,CDS,intron-Distal,intron-Proximal4.485279.61116K562ZNF622
chr82890647428906577+3'-UTR,CDS,intron-Proximal3.453564.91393K562SRSF1
chr82892143528921483+3'-UTR,intron-Proximal3.640734.93068K562LSM11
chr82892136228921447+3'-UTR,intron-Proximal3.456883.75706HepG2LSM11
chr82890487228904910+3'-UTR,CDS,intron-Distal,intron-Proximal3.720985.21950K562DDX24
chr82890692528907017+3'-UTR,intron-Distal,intron-Proximal3.972203.37631K562HNRNPL
chr82887627628876304+3'-UTR,CDS,intron-Proximal3.428106.18248K562UCHL5
chr82887634528876437+3'-UTR,CDS,intron-Proximal3.200546.00907HepG2PPIG
chr82890646828906567+3'-UTR,CDS,intron-Proximal3.299047.70439HepG2BCLAF1
chr82890490928904971+3'-UTR,CDS,intron-Distal,intron-Proximal3.232515.17653K562UCHL5
chr82892143528921481+3'-UTR,intron-Proximal4.433885.25643K562ILF3
chr82890888728908943+3'-UTR,intron-Distal3.881653.06084HepG2HNRNPK
chr82890653728906565+3'-UTR,CDS5.066168.18798K562UCHL5
chr82892166028921736+3'-UTR,intron-Proximal3.177083.99662HepG2XPO5
chr82890682528906897+3'-UTR,CDS,intron-Distal,intron-Proximal3.177576.19730K562ZNF622
chr82890288128902960+3'-UTR,CDS3.499259.00464K562ZNF622
chr82890487428904967+3'-UTR,CDS,intron-Distal,intron-Proximal3.440244.72836K562ZNF800
chr82890956528909629+3'-UTR,intron-Distal3.798196.76837K562UPF1
chr82890295828903006+3'-UTR,CDS,intron-Proximal4.245484.49024K562AQR
chr82892134228921429+3'-UTR,intron-Proximal3.445565.28960K562AQR
chr82892137528921441+3'-UTR,intron-Proximal3.845276.01031K562ZC3H11A
chr82890969228909723+3'-UTR,intron-Distal4.161853.67607K562YBX3
chr82874827728748442+5'-UTR,intron-Distal,intron-Proximal4.986338.82769HepG2PRPF4
chr82874827628748342+5'-UTR,intron-Distal,intron-Proximal3.177673.25786HepG2FAM120A
chr82874836628748454+5'-UTR,intron-Distal4.009037.95304K562GEMIN5
chr82874813928748195+5'-UTR3.224967.01182K562ZNF622
chr82886658728866613+CDS,intron-Proximal3.946244.09885HepG2BCLAF1
chr82886661028866652+CDS3.149355.75243K562ZNF622
chr82882758328827700+CDS3.181925.97026K562PUM1
chr82882792928827979+CDS3.445373.29348K562YBX3
chr82883759128837674+CDS,intron-Proximal3.0826912.72552K562UCHL5
chr82883761928837674+CDS,intron-Proximal3.401118.16183HepG2BCLAF1
chr82882790428827990+CDS4.3274216.15435K562ZNF622
chr82882783928827963+CDS3.883986.02304HepG2GRWD1
chr82882756128827620+CDS3.837625.06180HepG2BCLAF1
chr82882770028827749+CDS3.100833.28147K562GRWD1
chr82882775728827775+CDS4.4498612.06297K562YBX3
chr82882777528827794+CDS4.8921717.56774K562YBX3
chr82883758728837675+CDS,intron-Proximal4.6682414.63362K562DDX24
chr82886658728866635+CDS,intron-Proximal3.179358.39218K562UCHL5
chr82882755828827739+CDS,intron-Proximal3.2249621.22223K562ZNF622
chr82886658828866609+CDS,intron-Proximal3.690923.90826K562ZNF622
chr82886658828866633+CDS,intron-Proximal4.104526.28735K562DDX24
chr82886665728866700+CDS,intron-Proximal3.928108.88619K562UCHL5
chr82882799028828034+CDS4.6621710.62290K562ZNF622
chr82883761628837674+CDS,intron-Proximal3.404304.93175HepG2GRWD1
chr82886660728866656+CDS3.835343.14999HepG2GRWD1
chr82882798228828039+CDS,intron-Proximal3.817306.06436HepG2BCLAF1
chr82882138728821407+CDS3.950086.14226K562ZNF622
chr82882779528827806+CDS3.686176.80152K562YBX3
chr82883761828837699+CDS,intron-Proximal3.103164.74580K562SRSF1
chr82891626628916368+intron-Distal3.995936.14589K562IGF2BP1
chr82892150428921605+intron-Distal,intron-Proximal5.286289.14026K562XRN2
chr82877138828771443+intron-Distal4.772857.09172HepG2HNRNPC
chr82891324928913283+intron-Distal3.530635.08575HepG2SUGP2
chr82874905228749121+intron-Distal,intron-Proximal4.007023.01445K562EXOSC5
chr82887255228872617+intron-Distal4.571615.75114HepG2PTBP1
chr82890786528907960+intron-Distal3.508293.98203HepG2PRPF8
chr82876063828760708+intron-Distal3.173553.77111HepG2HNRNPL
chr82888353528883591+intron-Distal4.078457.78812K562HNRNPL
chr82891346328913523+intron-Distal,intron-Proximal4.0352710.24855HepG2SUGP2
chr82887255028872608+intron-Distal3.224876.04104K562PTBP1
chr82891370328913774+intron-Distal5.361148.61835K562TARDBP
chr82885451828854558+intron-Distal4.014993.30687K562EXOSC5
chr82891572328915748+intron-Distal3.835353.34627K562HNRNPK
chr82874949428749608+intron-Distal7.0837830.76165K562PTBP1
chr82876058628760693+intron-Distal3.719386.48340K562HNRNPL
chr82875893528759019+intron-Distal4.578036.19517K562MATR3
chr82882845228828555+intron-Distal4.379708.21618HepG2HNRNPL
chr82891398128914028+intron-Distal3.051883.48137K562IGF2BP2
chr82885566428855775+intron-Distal4.2043811.44618K562KHSRP
chr82876101528761089+intron-Distal3.071165.33343K562PTBP1
chr82877749828777561+intron-Distal4.888326.71516K562TARDBP
chr82874854328748640+intron-Distal,intron-Proximal4.6363011.87937K562TARDBP
chr82892124028921312+intron-Distal,intron-Proximal4.112476.49120HepG2CSTF2
chr82876521528765340+intron-Distal3.492464.98593K562KHSRP
chr82874857828748713+intron-Distal,intron-Proximal3.780775.00766K562EWSR1
chr82891791128918034+intron-Distal3.188406.13643K562MATR3
chr82883734928837449+intron-Distal5.093916.94732K562KHSRP
chr82877015328770237+intron-Distal3.285553.09339K562MATR3
chr82881817228818234+intron-Distal3.230953.48890K562KHSRP
chr82875865928758727+intron-Distal4.319194.31720HepG2MATR3
chr82875926528759319+intron-Distal5.169355.43236K562PTBP1
chr82891563728915722+intron-Distal5.103377.66465K562HNRNPK
chr82888370128883742+intron-Distal3.721613.19036K562HNRNPL
chr82892125028921311+intron-Distal,intron-Proximal3.878275.96427K562FMR1
chr82876101028761082+intron-Distal3.764595.07626HepG2PTBP1
chr82891833628918409+intron-Distal3.385063.98203K562MATR3
chr82892120628921255+intron-Distal3.700596.39618K562KHSRP
chr82892124028921315+intron-Distal,intron-Proximal4.3706220.73595K562CSTF2T
chr82882829328828374+intron-Distal4.223476.09502K562QKI
chr82892124128921293+intron-Distal4.157733.67707K562METAP2
chr82874865328748726+intron-Distal3.756006.89333K562EIF4G2
chr82891512128915208+intron-Distal3.6186511.01661K562FAM120A
chr82891554228915611+intron-Distal3.834023.29371HepG2IGF2BP1
chr82888364228883701+intron-Distal4.518145.85450K562HNRNPL
chr82885482728854956+intron-Distal4.131305.95946K562KHSRP
chr82888461528884721+intron-Distal4.324254.51735HepG2QKI
chr82891346028913528+intron-Distal,intron-Proximal4.6467913.15151K562FAM120A
chr82891773028917809+intron-Distal3.384077.56541HepG2SUGP2
chr82876058528760638+intron-Distal3.860973.51804HepG2HNRNPL
chr82892097928921051+intron-Distal3.854086.67846K562HNRNPK
chr82883204928832145+intron-Distal4.705117.00634K562KHSRP
chr82875895228759014+intron-Distal3.727584.48652HepG2PTBP1
chr82891549928915549+intron-Distal3.492094.95875K562IGF2BP2
chr82877769928777777+intron-Distal3.276543.06005HepG2QKI
chr82884572528845821+intron-Distal3.101553.28806K562KHSRP
chr82891426428914322+intron-Distal3.185493.91115K562LIN28B
chr82885583428855888+intron-Distal4.075783.24603K562KHSRP
chr82875335728753427+intron-Distal4.067874.31512K562KHSRP
chr82891872128918744+intron-Distal3.953773.79098HepG2SUGP2
chr82874948628749616+intron-Distal3.491878.06592HepG2PTBP1
chr82883748128837543+intron-Distal,intron-Proximal4.346093.12827HepG2U2AF2
chr82875927228759312+intron-Distal4.478283.62238HepG2MATR3
chr82888040428880487+intron-Distal3.053193.22514K562KHDRBS1
chr82891515928915273+intron-Distal3.130505.09613K562IGF2BP2
chr82891346228913524+intron-Distal,intron-Proximal4.8543623.15897K562UPF1
chr82891781028917824+intron-Distal4.112417.24705K562LIN28B
chr82875891928759037+intron-Distal3.574295.12973HepG2MATR3
chr82891748128917576+intron-Distal4.003144.78995K562MATR3
chr82891389428913948+intron-Distal3.790325.78794HepG2SUGP2
chr82875342728753501+intron-Distal3.803353.45805K562KHSRP
chr82888359128883642+intron-Distal4.864147.92673K562HNRNPL
chr82875895928759014+intron-Distal5.063605.43236K562PTBP1
chr82891608028916145+intron-Distal3.802494.81657K562IGF2BP1
chr82891760028917641+intron-Distal3.767293.06015K562MATR3
chr82891818828918273+intron-Distal3.189934.23271HepG2HNRNPM
chr82891793328918026+intron-Distal3.896833.39827HepG2MATR3
chr82891555328915637+intron-Distal3.579877.85117K562HNRNPK
chr82892152728921605+intron-Distal,intron-Proximal3.184445.80756K562CPSF6
chr82888747228887544+intron-Distal4.365516.85458K562PTBP1
chr82883702228837084+intron-Distal4.247893.45799HepG2U2AF2
chr82874875628748813+intron-Distal5.8282718.91594HepG2XPO5
chr82891339328913429+intron-Distal4.014993.30687K562EXOSC5
chr82882824828828337+intron-Distal3.771126.84523K562PTBP1
chr82886690328866984+intron-Distal4.367623.77802HepG2U2AF2
chr82891705528917107+intron-Distal3.083953.25976K562IGF2BP2
chr82888746828887531+intron-Distal3.603623.89405HepG2PTBP1
chr82891286828912932+intron-Distal5.1528221.14258HepG2PCBP2
chr82874907628749189+intron-Distal,intron-Proximal4.8061714.30498K562TARDBP
chr82891492828914970+intron-Distal3.222463.99385K562CSTF2T
chr82885552028855589+intron-Distal4.138543.01456K562EXOSC5
chr82882829328828360+intron-Distal3.941194.52298HepG2QKI
chr82878757828787650+intron-Distal3.151733.59523HepG2SUGP2
chr82891782428917854+intron-Distal4.358939.81070K562LIN28B
chr82891225428912352+intron-Distal3.243835.84225HepG2HNRNPK
chr82882836028828412+intron-Distal4.421293.83958HepG2QKI
chr82891228128912345+intron-Distal3.859006.44564K562HNRNPK
chr82891304228913128+intron-Distal3.092906.52950K562MATR3
chr82874904928749104+intron-Distal,intron-Proximal3.864733.12825K562EIF4G2
chr82888354028883686+intron-Distal3.5085310.37585HepG2HNRNPL
chr82874874328748756+intron-Distal6.6613119.52809HepG2XPO5
chr82875881728758935+intron-Distal4.557715.04209K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HMBOX1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HMBOX1 is not available on ENCORE database.

  • 107 RBPs can affect the levels of HMBOX1.  








The Knockdown/knockout RNA-Seq assay for HMBOX1 is not available on ENCORE database.





107 RBPs can affect the gene expression of HMBOX1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HMBOX1ENSG00000147421.13448.72080609.07380-0.440802.142901.31100HepG2ABCF1
HMBOX1ENSG00000147421.13741.81520393.354600.915108.004107.15080HepG2AKAP1
HMBOX1ENSG00000147421.13321.84600436.42050-0.439302.422801.85820HepG2BOP1
HMBOX1ENSG00000147421.13659.40830400.651800.718706.418705.40560HepG2CPSF6
HMBOX1ENSG00000147421.13496.00580364.667200.443704.011003.14480HepG2DAZAP1
HMBOX1ENSG00000147421.13332.41900475.28670-0.515804.980003.90620HepG2DDX19B
HMBOX1ENSG00000147421.13767.64960454.971600.754603.990602.82940HepG2DDX59
HMBOX1ENSG00000147421.13319.29740491.68150-0.622805.787704.87400HepG2DKC1
HMBOX1ENSG00000147421.13422.61720311.170100.441502.132901.60460HepG2EIF2S1
HMBOX1ENSG00000147421.13471.59450334.807500.494102.150301.54150HepG2EIF4B
HMBOX1ENSG00000147421.13310.84390502.14620-0.691906.074004.83470HepG2EWSR1
HMBOX1ENSG00000147421.13370.75330240.088100.626803.894102.97060HepG2FUBP3
HMBOX1ENSG00000147421.13180.87880267.54260-0.564702.535701.68200HepG2GEMIN5
HMBOX1ENSG00000147421.13218.51370333.59750-0.610403.384502.67870HepG2HNRNPA1
HMBOX1ENSG00000147421.13528.00340402.929400.389902.798502.07730HepG2HNRNPF
HMBOX1ENSG00000147421.13432.10070332.167600.379402.892202.20580HepG2HNRNPL
HMBOX1ENSG00000147421.13294.69080424.42340-0.526303.127802.12000HepG2HNRNPM
HMBOX1ENSG00000147421.13281.98210368.62690-0.386602.382301.81660HepG2HNRNPU
HMBOX1ENSG00000147421.13578.54480849.42770-0.554103.555702.15840HepG2HSPD1
HMBOX1ENSG00000147421.13502.59790376.537400.416503.888703.03470HepG2ILF2
HMBOX1ENSG00000147421.13426.00850701.39500-0.719305.121103.97750HepG2LARP4
HMBOX1ENSG00000147421.13473.81550347.065000.449002.384501.77410HepG2MAGOH
HMBOX1ENSG00000147421.13506.27580804.87030-0.668804.377502.57690HepG2NKRF
HMBOX1ENSG00000147421.13531.87090384.311600.468702.689701.95140HepG2NSUN2
HMBOX1ENSG00000147421.13584.53010785.58170-0.426503.262901.52840HepG2NUP35
HMBOX1ENSG00000147421.13937.16690553.268700.760204.559903.40040HepG2PABPC1
HMBOX1ENSG00000147421.13513.59490318.156300.690805.029404.06710HepG2PABPC4
HMBOX1ENSG00000147421.13459.77300366.462000.327202.516001.94490HepG2PUM1
HMBOX1ENSG00000147421.13471.29770366.183500.364002.276701.66650HepG2PUM2
HMBOX1ENSG00000147421.13335.25820523.46940-0.642807.179006.26530HepG2PUS1
HMBOX1ENSG00000147421.13499.90740347.705200.523704.017003.28420HepG2QKI
HMBOX1ENSG00000147421.13431.32900315.579600.450702.768602.09380HepG2RBM25
HMBOX1ENSG00000147421.13209.67370292.33950-0.479502.086901.54640HepG2RPS19
HMBOX1ENSG00000147421.13240.21320364.03490-0.599803.256402.38800HepG2RPS2
HMBOX1ENSG00000147421.13304.66880608.18830-0.997303.952302.99640HepG2RPS3A
HMBOX1ENSG00000147421.13420.41640334.259300.330801.865301.36350HepG2SF3B4
HMBOX1ENSG00000147421.13489.86430331.028300.565305.799104.84590HepG2SLBP
HMBOX1ENSG00000147421.13985.36120594.802000.7281012.8479011.97890HepG2SRFBP1
HMBOX1ENSG00000147421.13511.30500348.907800.551204.917104.33320HepG2SRSF1
HMBOX1ENSG00000147421.13877.67870461.610400.926908.506306.66930HepG2SRSF3
HMBOX1ENSG00000147421.13504.57100395.875200.349902.244901.61100HepG2SRSF7
HMBOX1ENSG00000147421.13426.82560283.866700.588305.392904.66630HepG2SRSF9
HMBOX1ENSG00000147421.13606.36220846.09320-0.480603.249901.86510HepG2SSRP1
HMBOX1ENSG00000147421.13423.17520313.649400.432002.857502.28840HepG2TAF15
HMBOX1ENSG00000147421.13464.00210831.06350-0.840803.990802.72410HepG2TBRG4
HMBOX1ENSG00000147421.13402.70320288.161400.482703.254002.35190HepG2TIA1
HMBOX1ENSG00000147421.13238.20140358.13020-0.588303.880003.30900HepG2TIAL1
HMBOX1ENSG00000147421.13616.95440357.017700.789106.004204.74170HepG2UBE2L3
HMBOX1ENSG00000147421.13855.71450630.322500.440904.967204.20480HepG2UTP3
HMBOX1ENSG00000147421.13551.69310718.03450-0.380203.998903.37420HepG2ZNF622
HMBOX1ENSG00000147421.131478.166802656.20160-0.8456027.7806026.08150K562AGGF1
HMBOX1ENSG00000147421.131831.041202918.81270-0.6727010.551308.29620K562AKAP8
HMBOX1ENSG00000147421.131602.208502763.91020-0.7866013.8967012.25910K562AKAP8L
HMBOX1ENSG00000147421.131326.039201738.67990-0.390903.620302.17850K562APOBEC3C
HMBOX1ENSG00000147421.13754.779901152.08420-0.610102.986502.38050K562AQR
HMBOX1ENSG00000147421.131891.319302900.02970-0.6167012.078209.99060K562ATP5C1
HMBOX1ENSG00000147421.13587.04560720.96180-0.296502.427801.53050K562BCLAF1
HMBOX1ENSG00000147421.132151.982303174.26780-0.560809.614207.41300K562CCDC124
HMBOX1ENSG00000147421.131357.611501788.32700-0.397505.576503.96070K562CPEB4
HMBOX1ENSG00000147421.131059.96930869.887200.285002.051001.36680K562CPSF6
HMBOX1ENSG00000147421.131791.330902423.12810-0.435806.432004.95700K562CELF1
HMBOX1ENSG00000147421.131058.508101850.29120-0.8057012.7251011.43510K562DDX47
HMBOX1ENSG00000147421.132084.423402974.09030-0.5128010.062708.17960K562DKC1
HMBOX1ENSG00000147421.13465.69860646.61910-0.473503.346101.86060K562DNAJC21
HMBOX1ENSG00000147421.13546.82480775.17050-0.503403.124901.75890K562EEF2
HMBOX1ENSG00000147421.13547.43330748.91900-0.452103.332602.32620K562EFTUD2
HMBOX1ENSG00000147421.13415.32200611.64330-0.558502.441401.50140K562EIF3A
HMBOX1ENSG00000147421.13491.06320780.57000-0.668608.728107.31890K562EIF3G
HMBOX1ENSG00000147421.131388.086101970.48570-0.505509.037707.37810K562EIF4G2
HMBOX1ENSG00000147421.13611.378501036.29470-0.761309.206007.56190K562FIP1L1
HMBOX1ENSG00000147421.13651.852401234.55690-0.9214020.1095018.59260K562FXR1
HMBOX1ENSG00000147421.13618.24150830.49650-0.425803.300502.43510K562GPKOW
HMBOX1ENSG00000147421.13703.842201119.25090-0.669207.938906.64560K562GRSF1
HMBOX1ENSG00000147421.13699.44360996.69800-0.510905.427303.94380K562HNRNPA1
HMBOX1ENSG00000147421.131164.485901672.92140-0.522703.017201.37670K562HNRNPAB
HMBOX1ENSG00000147421.13564.56980748.48330-0.406802.951202.33760K562HNRNPC
HMBOX1ENSG00000147421.13703.235801301.04530-0.8876011.520408.98670K562HNRNPK
HMBOX1ENSG00000147421.131210.719101672.21120-0.465905.346903.82130K562HNRNPL
HMBOX1ENSG00000147421.13524.86970852.37220-0.699506.054304.60980K562HNRNPM
HMBOX1ENSG00000147421.131004.169201404.98870-0.484604.580803.56260K562HSPD1
HMBOX1ENSG00000147421.131892.758402933.15750-0.6320010.170308.31250K562KIF1C
HMBOX1ENSG00000147421.13872.17490667.476800.385803.076101.44040K562LSM11
HMBOX1ENSG00000147421.13937.339101369.08690-0.546606.570605.24960K562MAGOH
HMBOX1ENSG00000147421.131841.457602807.78750-0.608608.574506.27080K562MAK16
HMBOX1ENSG00000147421.13919.040301366.28910-0.572107.456205.84720K562MATR3
HMBOX1ENSG00000147421.132199.798703285.88320-0.578909.483107.59900K562MBNL1
HMBOX1ENSG00000147421.13617.59470810.67070-0.392502.979302.06830K562METAP2
HMBOX1ENSG00000147421.131558.403802100.29810-0.430504.653203.18350K562MSI2
HMBOX1ENSG00000147421.131101.400301379.84250-0.325202.020301.32430K562MTPAP
HMBOX1ENSG00000147421.131654.700902303.16980-0.477103.296902.31780K562NAA15
HMBOX1ENSG00000147421.131710.003702155.48180-0.334003.029501.46100K562NOL12
HMBOX1ENSG00000147421.13457.30310738.12680-0.690706.027103.96630K562NONO
HMBOX1ENSG00000147421.131131.636801533.06450-0.438008.627807.41230K562NSUN2
HMBOX1ENSG00000147421.13496.35150785.72160-0.662705.516902.99030K562PA2G4
HMBOX1ENSG00000147421.13984.888501218.12390-0.306602.170901.30860K562PCBP2
HMBOX1ENSG00000147421.13830.557301109.67500-0.418002.873902.02540K562PCBP3
HMBOX1ENSG00000147421.13443.68860709.62670-0.677505.694203.04410K562PES1
HMBOX1ENSG00000147421.131574.275502024.74990-0.363104.238902.50160K562PNPT1
HMBOX1ENSG00000147421.13550.03950851.18910-0.629907.415906.12450K562POLR2G
HMBOX1ENSG00000147421.13771.405401176.40660-0.608806.396405.05970K562PPIG
HMBOX1ENSG00000147421.13405.47100728.78650-0.845908.694407.36010K562PRPF8
HMBOX1ENSG00000147421.13948.865601330.16370-0.487305.695004.77140K562PTBP1
HMBOX1ENSG00000147421.13926.176502149.91340-1.2149028.7136026.09750K562PUF60
HMBOX1ENSG00000147421.131557.461102287.02020-0.554306.027404.39790K562PUM1
HMBOX1ENSG00000147421.131690.513402240.57180-0.406404.872203.58610K562PUM2
HMBOX1ENSG00000147421.131622.528602740.95510-0.7564011.2242010.18020K562PUS1
HMBOX1ENSG00000147421.131525.705302670.71860-0.8078020.2847018.63360K562RBM15
HMBOX1ENSG00000147421.13804.809001275.39490-0.664208.201806.64800K562RBM22
HMBOX1ENSG00000147421.13949.937501342.16630-0.498704.573303.13100K562NELFE
HMBOX1ENSG00000147421.13450.61980742.29250-0.720105.924204.72300K562RPS19
HMBOX1ENSG00000147421.13870.253301306.97360-0.586705.370703.91140K562RPS3
HMBOX1ENSG00000147421.13360.21320745.09020-1.048609.654507.28390K562RRP9
HMBOX1ENSG00000147421.131277.947901512.83920-0.243402.219201.48260K562SF3A3
HMBOX1ENSG00000147421.13995.406601206.20240-0.277102.273501.50050K562SF3B4
HMBOX1ENSG00000147421.13893.529001304.01900-0.545406.495905.42250K562SRSF1
HMBOX1ENSG00000147421.13985.703701261.70050-0.356102.998501.89130K562SRSF4
HMBOX1ENSG00000147421.13609.78920853.72260-0.485504.771303.68700K562SYNCRIP
HMBOX1ENSG00000147421.13749.054801319.71980-0.8171011.021109.45250K562TARDBP
HMBOX1ENSG00000147421.13930.158201242.34960-0.417502.940601.63040K562TROVE2
HMBOX1ENSG00000147421.131322.933801625.54590-0.297203.793502.96540K562UPF1
HMBOX1ENSG00000147421.13548.89390760.48950-0.470403.401802.01540K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HMBOX1 is not available on ENCORE database.





27 RBPs can affect the splicing of HMBOX1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHMBOX1ENSG00000147421.13chr8+2886693928867023288665882886669928876276288764300.059000.003480.05681includedK562SRSF1
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.201000.000180.04283excludedK562FTO
SEHMBOX1ENSG00000147421.13chr8+2890370828903933289028772890296028904874289049700.234000.003100.08602includedK562PRPF8
SEHMBOX1ENSG00000147421.13chr8+2886889028869036288665882886669928876276288764300.096000.001770.05698includedK562PRPF8
SEHMBOX1ENSG00000147421.13chr8+289077182890790328906470289065652890853428910251-0.233000.003860.06174excludedHepG2U2AF1
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.098000.001480.04287excludedK562AKAP8L
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.193000.000300.03980excludedK562FMR1
SEHMBOX1ENSG00000147421.13chr8+2890370828903933289028772890296028904874289049700.875000.000000.00000includedHepG2HNRNPK
SEHMBOX1ENSG00000147421.13chr8+2890370828903933289028772890296028904874289049700.229000.000000.00008includedHepG2TBRG4
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.179000.000000.00000excludedHepG2U2AF2
SEHMBOX1ENSG00000147421.13chr8+289068062890687828906473289065652890853428910242-0.232000.003030.03537excludedHepG2U2AF2
SEHMBOX1ENSG00000147421.13chr8+288672002886733828866588288666992887627628876416-0.080000.002050.09741excludedHepG2AKAP1
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.177000.009660.07899excludedK562AQR
SEHMBOX1ENSG00000147421.13chr8+289036862890393328902877289029602890487428904970-0.113000.000070.04486excludedK562ABCF1
SEHMBOX1ENSG00000147421.13chr8+2890370828903933289028772890296028904874289049700.196000.001080.04198includedK562FXR1
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.288000.000200.02488excludedHepG2SRSF7
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.083000.007680.08597excludedK562PUS1
SEHMBOX1ENSG00000147421.13chr8+288213272882140728747910287481952882755928828036-0.052000.007800.08698excludedK562PUS1
SEHMBOX1ENSG00000147421.13chr8+289068062890691128906476289065652890853428910787-0.215000.005380.06581excludedK562PUS1
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.168000.000020.00275excludedHepG2SFPQ
SEHMBOX1ENSG00000147421.13chr8+289077182890790328906470289065652890853428910251-0.341000.000160.04411excludedK562GPKOW
SEHMBOX1ENSG00000147421.13chr8+2890370828903933289028772890296028904874289049700.253000.000010.00150includedK562HNRNPL
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.155000.001050.09880excludedHepG2HNRNPUL1
SEHMBOX1ENSG00000147421.13chr8+289068062890691128906473289065652890853428910251-0.298000.003020.04852excludedK562U2AF2
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.119000.001810.05923excludedK562HNRNPU
SEHMBOX1ENSG00000147421.13chr8+289068062890691128906476289065652890853428910787-0.214000.001670.04026excludedK562RBM15
SEHMBOX1ENSG00000147421.13chr8+288375872883767328827559288280362886658828866699-0.060000.003160.06616excludedK562AGGF1
SEHMBOX1ENSG00000147421.13chr8+2886889028869036288665882886669928876276288764300.073000.001320.05040includedK562SF3B1
SEHMBOX1ENSG00000147421.13chr8+2890370828903933289028772890296028904874289049700.276000.000060.05098includedK562AARS
SEHMBOX1ENSG00000147421.13chr8+289037082890393328902877289029602890487428904970-0.188000.000680.08725excludedK562ZC3H8
SEHMBOX1ENSG00000147421.13chr8+2890370828903933289028772890296028904874289049700.855000.000000.00000includedK562HNRNPK
SEHMBOX1ENSG00000147421.13chr8+289068062890691128906470289065652890771828908171-0.477000.004930.06866excludedK562HNRNPC
MXEHMBOX1ENSG00000147421.13chr8+28906806289069112890771828907903289064702890656528908534289102510.140000.001400.089751includedK562HNRNPL
MXEHMBOX1ENSG00000147421.13chr8+28906806289069112890771828907903289064702890656528908534289102510.164000.001430.064451includedK562SF3B1
MXEHMBOX1ENSG00000147421.13chr8+28837587288376732886658828866699288275592882803628876276288764300.188000.002210.026901includedHepG2SFPQ
MXEHMBOX1ENSG00000147421.13chr8+28837587288376732886658828866699288275592882803628876276288764300.258000.000010.000131includedHepG2U2AF2
MXEHMBOX1ENSG00000147421.13chr8+28837587288376732886658828866699288275592882803628876276288764300.252000.000000.000041includedHepG2HNRNPUL1
MXEHMBOX1ENSG00000147421.13chr8+2890680628906911289077182890790328906470289065652890853428910251-0.396000.000870.018342includedK562HNRNPC
MXEHMBOX1ENSG00000147421.13chr8+28906806289069112890771828907903289064762890656528908534289102510.117000.000180.009601includedK562PPIL4
MXEHMBOX1ENSG00000147421.13chr8+28906806289069112890771828907903289064702890656528908534289102510.195000.000450.072041includedK562GPKOW
MXEHMBOX1ENSG00000147421.13chr8+2890287728902960289048742890497028876276288764302890647028906565-0.181000.001510.031122includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HMBOX1 is not avaliable on ENCORE database.