SPTA1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SPTA1	ENSG00000163554.13	0.00	0.00	0.00	ENCSR000AEF
HepG2	SPTA1	ENSG00000163554.13	0.00	0.00	0.00	ENCSR985KAT
K562	SPTA1	ENSG00000163554.13	26.12	30.11	28.12	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SPTA1 is not avaliable on ENCORE database.

Proteins bound to RNA

SPTA1 RNA is bound by 29 proteins.

eCLIP assay for SPTA1 is not avaliable on ENCORE database.

29 proteins are bound to SPTA1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	158580723	158580747	-	3'-UTR,intron-Distal	3.42427	6.85237	K562	RBFOX2
chr1	158580794	158580823	-	3'-UTR,intron-Distal	3.57172	3.49438	K562	DDX6
chr1	158580747	158580773	-	3'-UTR,intron-Distal	3.40252	6.85237	K562	RBFOX2
chr1	158580935	158581002	-	3'-UTR,intron-Distal,intron-Proximal	3.37303	5.16228	K562	EIF4G2
chr1	158580882	158580945	-	3'-UTR,intron-Distal,intron-Proximal	4.17153	4.10177	HepG2	SUB1
chr1	158580848	158580958	-	3'-UTR,intron-Distal,intron-Proximal	4.35591	17.44799	K562	TARDBP
chr1	158580578	158580680	-	3'-UTR,intron-Distal	3.66292	8.64081	K562	ZC3H11A
chr1	158580768	158580940	-	3'-UTR,intron-Distal,intron-Proximal	3.51951	16.26325	K562	ZC3H11A
chr1	158580797	158580935	-	3'-UTR,intron-Distal,intron-Proximal	4.42452	11.26268	K562	EIF4G2
chr1	158580869	158580893	-	3'-UTR,intron-Distal	4.15563	3.31904	K562	IGF2BP1
chr1	158580893	158580938	-	3'-UTR,intron-Distal,intron-Proximal	3.68040	3.36518	K562	IGF2BP1
chr1	158580727	158580831	-	3'-UTR,intron-Distal	3.42521	3.59910	K562	NOLC1
chr1	158614164	158614183	-	CDS,intron-Distal	3.88516	13.60263	K562	ZNF622
chr1	158614978	158615024	-	CDS,intron-Distal	3.37295	14.65559	K562	UCHL5
chr1	158590232	158590260	-	CDS,intron-Distal,intron-Proximal	3.78874	7.70834	K562	BUD13
chr1	158637821	158637850	-	CDS,intron-Distal	4.06190	15.86208	K562	ZNF622
chr1	158624531	158624593	-	CDS,intron-Distal,intron-Proximal	4.22060	21.88546	K562	SF3B4
chr1	158655061	158655120	-	CDS,intron-Distal	3.61659	17.24432	K562	UCHL5
chr1	158590081	158590123	-	CDS,intron-Distal	3.29605	12.29919	K562	UCHL5
chr1	158584050	158584105	-	CDS,intron-Distal,intron-Proximal	3.88659	5.84654	K562	U2AF1
chr1	158650397	158650443	-	CDS,intron-Distal	3.51176	24.38011	K562	ZNF622
chr1	158645999	158646023	-	CDS,intron-Distal	4.44301	18.12912	K562	ZNF622
chr1	158644338	158644445	-	CDS,intron-Distal	4.17794	14.41702	K562	DDX24
chr1	158626340	158626401	-	CDS,intron-Distal,intron-Proximal	4.13429	3.25843	K562	SRSF1
chr1	158655120	158655134	-	CDS,intron-Distal	3.38347	8.01687	K562	UCHL5
chr1	158615146	158615176	-	CDS,intron-Distal,intron-Proximal	3.61184	9.87923	K562	DDX24
chr1	158617398	158617412	-	CDS,intron-Distal	3.92063	11.39909	K562	ZNF622
chr1	158650482	158650513	-	CDS,intron-Distal	3.67381	16.67568	K562	ZNF622
chr1	158590123	158590142	-	CDS,intron-Distal	3.17260	7.53556	K562	UCHL5
chr1	158604333	158604389	-	CDS,intron-Distal	3.49574	17.01021	K562	DDX24
chr1	158654936	158654974	-	CDS,intron-Distal,intron-Proximal	4.15782	14.66057	K562	UCHL5
chr1	158644121	158644126	-	CDS,intron-Distal	3.62979	10.03572	K562	ZNF622
chr1	158644346	158644395	-	CDS,intron-Distal	3.33027	21.45917	K562	ZNF622
chr1	158632520	158632559	-	CDS,intron-Distal	3.95153	14.75114	K562	ZNF622
chr1	158627401	158627449	-	CDS,intron-Distal	4.04200	23.05065	K562	ZNF622
chr1	158637650	158637677	-	CDS,intron-Distal	5.52742	19.55530	K562	ZNF622
chr1	158624476	158624531	-	CDS,intron-Distal	3.68553	9.85050	K562	SF3B4
chr1	158607902	158607943	-	CDS,intron-Distal	3.49390	13.43334	K562	UCHL5
chr1	158641948	158641962	-	CDS,intron-Distal	3.87076	6.80284	K562	DDX24
chr1	158590223	158590275	-	CDS,intron-Distal,intron-Proximal	3.37015	9.11045	K562	AQR
chr1	158636162	158636182	-	CDS,intron-Distal	4.43582	12.34066	K562	UCHL5
chr1	158639324	158639350	-	CDS,intron-Distal	4.70225	9.08097	K562	DDX24
chr1	158637765	158637851	-	CDS,intron-Distal	3.15097	10.66150	K562	ZNF800
chr1	158590239	158590272	-	CDS,intron-Distal,intron-Proximal	3.37491	8.87150	K562	SF3B4
chr1	158650484	158650514	-	CDS,intron-Distal	3.79021	9.97367	K562	UCHL5
chr1	158589024	158589041	-	CDS,intron-Distal	3.35861	11.74712	K562	ZNF622
chr1	158623081	158623126	-	CDS,intron-Distal	3.48627	12.35734	K562	UCHL5
chr1	158624502	158624546	-	CDS,intron-Distal,intron-Proximal	3.08704	7.56548	K562	BUD13
chr1	158622262	158622304	-	CDS,intron-Distal	3.11302	3.50663	K562	ZNF800
chr1	158604334	158604346	-	CDS,intron-Distal	3.52957	11.41791	K562	UCHL5
chr1	158622277	158622299	-	CDS,intron-Distal	4.70518	13.77626	K562	ZNF622
chr1	158636107	158636204	-	CDS,intron-Distal	4.78214	42.35752	K562	ZNF622
chr1	158650397	158650426	-	CDS,intron-Distal	3.89497	4.49723	K562	ZNF800
chr1	158609454	158609475	-	CDS,intron-Distal	5.28882	16.39416	K562	UCHL5
chr1	158615119	158615175	-	CDS,intron-Distal	3.46170	26.26860	K562	ZNF622
chr1	158641196	158641243	-	CDS,intron-Distal	3.98931	24.41410	K562	ZNF622
chr1	158648108	158648205	-	CDS,intron-Distal,intron-Proximal	5.45080	7.23906	K562	EFTUD2
chr1	158651447	158651457	-	CDS,intron-Distal	3.27884	12.84530	K562	ZNF622
chr1	158607885	158607940	-	CDS,intron-Distal	3.32561	8.24785	K562	RBM15
chr1	158615091	158615174	-	CDS,intron-Distal	3.58067	17.31046	K562	UCHL5
chr1	158648301	158648324	-	CDS,intron-Distal	3.30103	6.81129	K562	GRWD1
chr1	158588995	158589049	-	CDS,intron-Distal,intron-Proximal	3.61042	5.99472	K562	GRWD1
chr1	158614170	158614185	-	CDS,intron-Distal	3.49849	8.45049	K562	UCHL5
chr1	158631095	158631142	-	CDS,intron-Distal	3.46896	8.05533	K562	DDX24
chr1	158622257	158622281	-	CDS,intron-Distal	3.50336	7.35873	K562	GRWD1
chr1	158637790	158637807	-	CDS,intron-Distal	4.70210	15.74729	K562	ZNF622
chr1	158583510	158583541	-	CDS,intron-Distal,intron-Proximal	3.42528	12.57224	K562	UCHL5
chr1	158581149	158581173	-	CDS,intron-Distal	4.84420	5.17743	K562	ZC3H11A
chr1	158645948	158646026	-	CDS,intron-Distal	4.96896	14.63362	K562	DDX24
chr1	158627398	158627447	-	CDS,intron-Distal	3.70068	15.90087	K562	UCHL5
chr1	158609659	158609695	-	CDS,intron-Distal,intron-Proximal	3.67643	14.51272	K562	UCHL5
chr1	158609726	158609766	-	CDS,intron-Distal	3.50597	19.67291	K562	ZNF622
chr1	158650464	158650520	-	CDS,intron-Distal,intron-Proximal	4.09316	9.86075	K562	DDX24
chr1	158618376	158618421	-	CDS,intron-Distal	3.03842	12.46213	K562	UCHL5
chr1	158639343	158639353	-	CDS,intron-Distal	4.01444	15.90215	K562	ZNF622
chr1	158648234	158648267	-	CDS,intron-Distal	3.35146	8.49954	K562	BUD13
chr1	158606439	158606454	-	CDS,intron-Distal	4.15923	13.18228	K562	ZNF622
chr1	158619656	158619715	-	CDS,intron-Distal	3.44855	18.37057	K562	ZNF622
chr1	158609787	158609795	-	CDS,intron-Distal	4.25003	10.26568	K562	UCHL5
chr1	158631122	158631160	-	CDS,intron-Distal	3.80554	14.90668	K562	UCHL5
chr1	158627396	158627435	-	CDS,intron-Distal	4.49491	4.82934	K562	RBM15
chr1	158653160	158653192	-	CDS,intron-Distal,intron-Proximal	3.55605	16.79142	K562	ZNF622
chr1	158609458	158609470	-	CDS,intron-Distal	3.39294	7.24530	K562	BUD13
chr1	158606511	158606534	-	CDS,intron-Distal	3.46013	11.99289	K562	ZNF622
chr1	158648304	158648324	-	CDS,intron-Distal	4.18948	13.21742	K562	DDX24
chr1	158655083	158655103	-	CDS,intron-Distal	3.65891	12.80819	K562	ZNF622
chr1	158650372	158650433	-	CDS,intron-Distal,intron-Proximal	4.10321	14.42306	K562	DDX24
chr1	158646023	158646043	-	CDS,intron-Distal	3.77424	14.74391	K562	ZNF622
chr1	158636141	158636183	-	CDS,intron-Distal	4.43392	4.82934	K562	RBM15
chr1	158651319	158651324	-	CDS,intron-Distal	3.83063	8.06634	K562	UCHL5
chr1	158604346	158604389	-	CDS,intron-Distal	3.32913	15.81318	K562	UCHL5
chr1	158607943	158607983	-	CDS,intron-Distal	3.10377	12.88649	K562	UCHL5
chr1	158641951	158641961	-	CDS,intron-Distal	4.65576	9.48722	K562	UCHL5
chr1	158647583	158647612	-	CDS,intron-Distal	3.05087	11.29934	K562	ZNF622
chr1	158622256	158622276	-	CDS,intron-Distal,intron-Proximal	3.20846	9.62698	K562	UCHL5
chr1	158587842	158587901	-	CDS,intron-Distal,intron-Proximal	4.07707	11.08359	K562	AQR
chr1	158639497	158639547	-	CDS,intron-Distal,intron-Proximal	4.03467	13.12700	K562	DDX24
chr1	158604335	158604384	-	CDS,intron-Distal	3.62305	21.93998	K562	ZNF622
chr1	158623187	158623214	-	CDS,intron-Distal	3.53125	12.54120	K562	ZNF622
chr1	158639152	158639201	-	CDS,intron-Distal,intron-Proximal	3.87015	4.41130	K562	AQR
chr1	158627463	158627476	-	CDS,intron-Distal	3.54036	11.60048	K562	ZNF622
chr1	158636195	158636280	-	CDS,intron-Distal	3.76441	3.25521	K562	LIN28B
chr1	158645968	158646078	-	CDS,intron-Distal	3.80641	15.22154	K562	BUD13
chr1	158581129	158581188	-	CDS,intron-Distal	3.66442	5.05651	K562	U2AF2
chr1	158609724	158609751	-	CDS,intron-Distal	3.33759	3.34231	K562	RBM15
chr1	158622392	158622470	-	CDS,intron-Distal,intron-Proximal	4.83902	6.56329	K562	U2AF2
chr1	158581133	158581188	-	CDS,intron-Distal	3.61765	3.17814	K562	U2AF1
chr1	158636113	158636227	-	CDS,intron-Distal	3.38816	11.23612	K562	PUM1
chr1	158624494	158624548	-	CDS,intron-Distal,intron-Proximal	6.21711	15.31462	K562	SMNDC1
chr1	158647481	158647513	-	CDS,intron-Distal,intron-Proximal	3.81510	10.84701	K562	UCHL5
chr1	158650372	158650398	-	CDS,intron-Distal,intron-Proximal	3.84296	17.98372	K562	UCHL5
chr1	158609459	158609475	-	CDS,intron-Distal	4.62060	16.53752	K562	ZNF622
chr1	158637755	158637850	-	CDS,intron-Distal	3.52449	15.75743	K562	UCHL5
chr1	158622256	158622277	-	CDS,intron-Distal,intron-Proximal	3.85687	13.60263	K562	ZNF622
chr1	158648233	158648296	-	CDS,intron-Distal	3.11686	14.41043	K562	UCHL5
chr1	158650373	158650382	-	CDS,intron-Distal	3.88080	7.82266	K562	GRWD1
chr1	158612310	158612331	-	CDS,intron-Distal,intron-Proximal	3.61649	4.88910	K562	ZNF800
chr1	158617466	158617529	-	CDS,intron-Distal,intron-Proximal	3.17018	5.69184	K562	AQR
chr1	158651318	158651324	-	CDS,intron-Distal	3.90977	6.80284	K562	DDX24
chr1	158648234	158648252	-	CDS,intron-Distal	4.09896	19.92650	K562	ZNF622
chr1	158619702	158619719	-	CDS,intron-Distal	4.03173	6.26935	K562	DDX24
chr1	158609660	158609690	-	CDS,intron-Distal	4.09090	21.40964	K562	ZNF622
chr1	158617467	158617509	-	CDS,intron-Distal	3.69236	6.59132	K562	YBX3
chr1	158627367	158627391	-	CDS,intron-Distal	3.93238	16.41910	K562	ZNF622
chr1	158641135	158641159	-	CDS,intron-Distal	4.57006	5.07334	K562	GRWD1
chr1	158648252	158648289	-	CDS,intron-Distal	4.05488	23.36911	K562	ZNF622
chr1	158615284	158615333	-	CDS,intron-Distal,intron-Proximal	3.34178	21.10703	K562	ZNF622
chr1	158614133	158614151	-	CDS,intron-Distal	4.21924	9.98860	K562	UCHL5
chr1	158648261	158648275	-	CDS,intron-Distal	3.30346	4.56136	K562	GRWD1
chr1	158648235	158648304	-	CDS,intron-Distal	4.48963	21.86233	K562	DDX24
chr1	158639197	158639207	-	CDS,intron-Distal,intron-Proximal	3.74448	10.58978	K562	ZNF622
chr1	158609690	158609726	-	CDS,intron-Distal	3.85691	25.07286	K562	ZNF622
chr1	158583510	158583520	-	CDS,intron-Distal,intron-Proximal	4.57623	12.74895	K562	ZNF622
chr1	158617474	158617508	-	CDS,intron-Distal	3.59300	16.22459	K562	ZNF622
chr1	158590083	158590154	-	CDS,intron-Distal	3.65459	28.51305	K562	ZNF622
chr1	158653254	158653279	-	CDS,intron-Distal	3.54128	5.77496	K562	DDX24
chr1	158651420	158651442	-	CDS,intron-Distal	4.29075	15.94459	K562	ZNF622
chr1	158584051	158584103	-	CDS,intron-Distal,intron-Proximal	3.38920	5.82046	K562	SF3B4
chr1	158650372	158650397	-	CDS,intron-Distal,intron-Proximal	3.56718	20.53426	K562	ZNF622
chr1	158651316	158651326	-	CDS,intron-Distal,intron-Proximal	3.00963	10.44488	K562	ZNF622
chr1	158648219	158648221	-	CDS,intron-Distal	3.46719	8.65547	K562	ZNF622
chr1	158645968	158645996	-	CDS,intron-Distal	3.50208	12.86496	K562	ZNF622
chr1	158647592	158647616	-	CDS,intron-Distal	4.53134	4.66036	K562	PUM1
chr1	158641940	158641974	-	CDS,intron-Distal	3.07307	16.29691	K562	ZNF622
chr1	158636146	158636186	-	CDS,intron-Distal	3.21457	9.24349	K562	BUD13
chr1	158639498	158639550	-	CDS,intron-Distal,intron-Proximal	3.43358	26.29722	K562	ZNF622
chr1	158653161	158653179	-	CDS,intron-Distal	3.03970	3.71168	K562	DDX24
chr1	158584045	158584105	-	CDS,intron-Distal,intron-Proximal	3.75012	5.64745	K562	U2AF2
chr1	158650513	158650518	-	CDS,intron-Distal	3.04114	9.32148	K562	ZNF622
chr1	158627350	158627367	-	CDS,intron-Distal	5.30892	16.78381	K562	ZNF622
chr1	158648289	158648324	-	CDS,intron-Distal	3.61350	20.26048	K562	ZNF622
chr1	158590220	158590269	-	CDS,intron-Distal,intron-Proximal	4.48945	6.56329	K562	U2AF2
chr1	158624485	158624545	-	CDS,intron-Distal,intron-Proximal	3.65098	6.67908	K562	U2AF2
chr1	158582732	158582751	-	CDS,intron-Distal	3.52761	9.68455	K562	UCHL5
chr1	158582747	158582750	-	CDS,intron-Distal	5.08160	12.31016	K562	ZNF622
chr1	158644395	158644447	-	CDS,intron-Distal	3.07617	20.22204	K562	ZNF622
chr1	158617463	158617484	-	CDS,intron-Distal	3.42012	7.80035	K562	UCHL5
chr1	158639197	158639205	-	CDS,intron-Distal,intron-Proximal	4.23661	8.54394	K562	BUD13
chr1	158612202	158612214	-	CDS,intron-Distal	4.14011	10.54329	K562	UCHL5
chr1	158639324	158639343	-	CDS,intron-Distal	4.46195	18.33672	K562	ZNF622
chr1	158637758	158637843	-	CDS,intron-Distal	3.02796	13.15769	K562	DDX24
chr1	158588968	158588982	-	intron-Distal,intron-Proximal	5.11274	23.42997	K562	AQR
chr1	158592757	158592767	-	intron-Distal,intron-Proximal	3.31404	5.28960	K562	AQR
chr1	158587863	158587922	-	intron-Distal,intron-Proximal	5.21559	6.40247	K562	SF3B4
chr1	158587387	158587488	-	intron-Distal,intron-Proximal	4.02679	9.31101	K562	KHSRP
chr1	158596427	158596532	-	intron-Distal,intron-Proximal	4.11859	3.37631	K562	HNRNPL
chr1	158607174	158607207	-	intron-Distal	3.07256	4.74176	K562	HNRNPL
chr1	158590278	158590317	-	intron-Distal,intron-Proximal	4.40823	9.71879	K562	SF3B4
chr1	158607254	158607287	-	intron-Distal	4.55717	6.38702	K562	HNRNPL
chr1	158625993	158626043	-	intron-Distal	4.49301	19.64732	K562	PTBP1
chr1	158601925	158602013	-	intron-Distal	3.97155	3.66668	K562	KHSRP
chr1	158592708	158592757	-	intron-Distal,intron-Proximal	5.18137	17.18244	K562	AQR
chr1	158624719	158624821	-	intron-Distal	3.03625	4.91112	K562	KHSRP
chr1	158592685	158592708	-	intron-Distal,intron-Proximal	4.51576	6.99120	K562	AQR
chr1	158624690	158624770	-	intron-Distal	4.00688	12.79353	K562	U2AF2
chr1	158607207	158607254	-	intron-Distal	3.76781	8.83560	K562	HNRNPL
chr1	158648121	158648189	-	intron-Distal,intron-Proximal	5.66263	9.41643	K562	AQR
chr1	158641259	158641289	-	intron-Distal,intron-Proximal	5.00643	4.40745	K562	SF3B4
chr1	158602104	158602223	-	intron-Distal	3.97003	3.25538	K562	KHSRP
chr1	158641840	158641849	-	intron-Distal,intron-Proximal	3.59418	5.62171	K562	AQR
chr1	158588627	158588712	-	intron-Distal	4.62687	16.86220	K562	HNRNPL
chr1	158592698	158592760	-	intron-Distal,intron-Proximal	4.19276	5.85201	K562	PRPF8
chr1	158607351	158607417	-	intron-Distal	4.04032	11.20430	K562	HNRNPL
chr1	158589006	158589012	-	intron-Distal,intron-Proximal	3.89115	15.01764	K562	AQR
chr1	158626043	158626070	-	intron-Distal	4.83712	18.09013	K562	PTBP1
chr1	158626066	158626120	-	intron-Distal	4.07501	4.29034	K562	U2AF2
chr1	158588923	158588968	-	intron-Distal,intron-Proximal	3.30872	9.34383	K562	AQR
chr1	158606553	158606609	-	intron-Distal,intron-Proximal	3.10735	5.53688	K562	SF3B4
chr1	158588982	158589006	-	intron-Distal,intron-Proximal	4.13196	18.83153	K562	AQR
chr1	158626001	158626055	-	intron-Distal	3.48472	3.66814	K562	U2AF2
chr1	158641818	158641840	-	intron-Distal,intron-Proximal	3.95984	6.21987	K562	AQR
chr1	158587769	158587791	-	intron-Distal,intron-Proximal	4.19656	6.62503	K562	KHSRP
chr1	158585195	158585255	-	intron-Distal,intron-Proximal	4.82327	9.71879	K562	SF3B4
chr1	158612534	158612580	-	intron-Distal,intron-Proximal	5.21081	6.22530	K562	AQR
chr1	158641090	158641115	-	intron-Distal,intron-Proximal	3.65414	4.88100	K562	AQR
chr1	158622213	158622255	-	intron-Distal,intron-Proximal	3.66052	3.94787	K562	AQR
chr1	158626070	158626106	-	intron-Distal	3.84617	6.13897	K562	PTBP1
chr1	158587683	158587769	-	intron-Distal,intron-Proximal	3.44191	6.92889	K562	KHSRP
chr1	158641804	158641818	-	intron-Distal,intron-Proximal	4.06495	6.69182	K562	AQR
chr1	158587791	158587822	-	intron-Distal,intron-Proximal	4.51278	3.66668	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for SPTA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SPTA1 is not available on ENCORE database.
82 RBPs can affect the levels of SPTA1.

The Knockdown/knockout RNA-Seq assay for SPTA1 is not available on ENCORE database.

82 RBPs can affect the gene expression of SPTA1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SPTA1	ENSG00000163554.7	8.86570	0.00000	99999.99990	2.60700	1.90000	HepG2	TARDBP
SPTA1	ENSG00000163554.7	5673.39270	6405.73240	-0.17520	2.16290	1.65040	K562	AGGF1
SPTA1	ENSG00000163554.7	9685.76360	6678.90070	0.53620	8.81470	6.52120	K562	APOBEC3C
SPTA1	ENSG00000163554.7	4618.99280	6368.10740	-0.46330	6.38120	5.55150	K562	AQR
SPTA1	ENSG00000163554.7	2696.69850	3446.07770	-0.35380	5.50450	3.53000	K562	BCCIP
SPTA1	ENSG00000163554.7	2673.59630	3329.89020	-0.31670	5.06580	3.75020	K562	BCLAF1
SPTA1	ENSG00000163554.7	2267.95180	1661.06030	0.44920	2.43720	1.46020	K562	CCAR1
SPTA1	ENSG00000163554.7	6048.02930	7655.02680	-0.33990	4.37690	2.85530	K562	CCDC124
SPTA1	ENSG00000163554.7	4691.10230	3414.89230	0.45800	3.35470	1.67750	K562	CEBPZ
SPTA1	ENSG00000163554.7	4992.74050	6573.67020	-0.39690	3.21310	1.64130	K562	CKAP4
SPTA1	ENSG00000163554.7	4523.93900	5857.61690	-0.37270	7.61390	5.75570	K562	CPEB4
SPTA1	ENSG00000163554.7	2564.51990	3859.48170	-0.58970	10.60080	9.05160	K562	CPSF6
SPTA1	ENSG00000163554.7	2163.54840	2526.21720	-0.22360	2.24870	1.31550	K562	CSTF2
SPTA1	ENSG00000163554.7	10975.78760	9306.43460	0.23790	2.87760	1.88480	K562	CELF1
SPTA1	ENSG00000163554.7	5606.67250	3925.38830	0.51420	3.98360	2.51300	K562	DDX21
SPTA1	ENSG00000163554.7	15066.55170	6061.25210	1.31360	73.34240	70.50800	K562	DDX47
SPTA1	ENSG00000163554.7	4734.42490	7172.22750	-0.59920	16.37300	13.88050	K562	DKC1
SPTA1	ENSG00000163554.7	7113.73420	3227.96720	1.13990	17.89070	15.02810	K562	EEF2
SPTA1	ENSG00000163554.7	1779.61400	3118.53580	-0.80930	13.83320	11.63340	K562	EFTUD2
SPTA1	ENSG00000163554.7	1599.88580	5188.57900	-1.69740	19.86020	18.19600	K562	EIF2S2
SPTA1	ENSG00000163554.7	3536.30540	1689.67420	1.06540	4.39200	3.09790	K562	EIF3A
SPTA1	ENSG00000163554.7	7414.68790	3338.47660	1.15110	20.79960	17.89840	K562	EIF3D
SPTA1	ENSG00000163554.7	5004.99370	2820.01760	0.82760	2.13400	1.42820	K562	EIF3G
SPTA1	ENSG00000163554.7	2012.82570	2663.60150	-0.40420	2.60950	1.81270	K562	EIF4A3
SPTA1	ENSG00000163554.7	3175.39010	2398.82780	0.40450	6.18790	4.34090	K562	EIF4B
SPTA1	ENSG00000163554.7	13666.19770	7569.11470	0.85230	33.01590	30.15670	K562	EIF4G2
SPTA1	ENSG00000163554.7	3233.95020	2242.88530	0.52780	5.53830	3.84320	K562	FKBP4
SPTA1	ENSG00000163554.7	2399.99100	3927.33220	-0.71050	11.59360	9.77030	K562	FMR1
SPTA1	ENSG00000163554.7	4026.71590	2770.05330	0.53960	10.43200	9.34270	K562	FXR1
SPTA1	ENSG00000163554.7	4788.86450	3774.84960	0.34320	5.39700	3.83570	K562	GLRX3
SPTA1	ENSG00000163554.7	3087.85480	3684.68950	-0.25490	2.20010	1.49020	K562	GPKOW
SPTA1	ENSG00000163554.7	3714.52620	6915.16930	-0.89660	6.29330	5.14710	K562	GRSF1
SPTA1	ENSG00000163554.7	5931.41920	3523.33790	0.75130	17.38260	15.00400	K562	HNRNPA1
SPTA1	ENSG00000163554.7	4626.23930	3558.60290	0.37840	3.38330	1.99980	K562	HNRNPK
SPTA1	ENSG00000163554.7	2749.71120	4170.58010	-0.60100	4.39410	3.20240	K562	HNRNPM
SPTA1	ENSG00000163554.7	3154.77600	6875.56960	-1.12390	10.65550	9.12040	K562	HSPD1
SPTA1	ENSG00000163554.7	2519.63340	1735.22780	0.53800	3.97830	2.17910	K562	ILF3
SPTA1	ENSG00000163554.7	3119.57180	3744.43880	-0.26340	2.37400	1.59280	K562	MAGOH
SPTA1	ENSG00000163554.7	5661.51880	6771.31160	-0.25820	2.52250	1.51080	K562	MAK16
SPTA1	ENSG00000163554.7	5370.78930	3736.92830	0.52320	8.53900	6.81580	K562	MATR3
SPTA1	ENSG00000163554.7	6210.08000	7924.22500	-0.35170	4.57430	3.34430	K562	MBNL1
SPTA1	ENSG00000163554.7	2763.70380	3596.73810	-0.38010	3.76930	2.73540	K562	METAP2
SPTA1	ENSG00000163554.7	5292.88000	8067.98140	-0.60820	10.02950	7.97490	K562	MSI2
SPTA1	ENSG00000163554.7	5669.58280	3968.79110	0.51440	16.36600	14.62050	K562	MTPAP
SPTA1	ENSG00000163554.7	1780.01900	3074.07110	-0.78830	10.36040	7.64750	K562	NONO
SPTA1	ENSG00000163554.7	5735.76320	4409.52070	0.37930	8.79010	7.56200	K562	NSUN2
SPTA1	ENSG00000163554.7	2015.25170	3331.72630	-0.72530	13.13200	10.89300	K562	PCBP2
SPTA1	ENSG00000163554.7	2066.79580	2955.02940	-0.51580	5.30020	2.74310	K562	PES1
SPTA1	ENSG00000163554.7	2853.37230	5756.02950	-1.01240	9.42020	7.65740	K562	PPIG
SPTA1	ENSG00000163554.7	2181.18150	3034.70790	-0.47640	5.36020	4.31350	K562	PRPF8
SPTA1	ENSG00000163554.7	1506.90480	2315.94440	-0.62000	8.71340	6.91270	K562	PSIP1
SPTA1	ENSG00000163554.7	2635.33470	3637.91460	-0.46510	6.78310	5.77910	K562	PTBP1
SPTA1	ENSG00000163554.7	5696.65390	8258.52230	-0.53580	8.29820	6.88200	K562	PUF60
SPTA1	ENSG00000163554.7	4233.71970	8606.82400	-1.02360	48.41820	45.16650	K562	PUM2
SPTA1	ENSG00000163554.7	3640.37060	2588.48690	0.49190	7.37790	5.11690	K562	RBM25
SPTA1	ENSG00000163554.7	2940.60620	2113.14740	0.47660	7.09150	5.49980	K562	RCC2
SPTA1	ENSG00000163554.7	4319.00140	2777.18890	0.63700	18.47040	15.01180	K562	RPS10
SPTA1	ENSG00000163554.7	4257.67950	3090.80660	0.46200	3.80330	2.84200	K562	RPS19
SPTA1	ENSG00000163554.7	4493.32170	3128.89140	0.52200	6.28680	4.70090	K562	RPS3
SPTA1	ENSG00000163554.7	4283.68470	3102.44420	0.46530	3.27180	1.82580	K562	RRP9
SPTA1	ENSG00000163554.7	3745.46310	3045.74120	0.29830	2.60850	1.56000	K562	SAFB
SPTA1	ENSG00000163554.7	5356.83800	3149.21880	0.76630	5.14630	3.17750	K562	SDAD1
SPTA1	ENSG00000163554.7	2687.64780	3504.87420	-0.38300	3.04270	2.02210	K562	SF3B1
SPTA1	ENSG00000163554.7	9019.65860	4458.03640	1.01660	67.75970	64.70060	K562	SRPK2
SPTA1	ENSG00000163554.7	1601.97570	3566.30580	-1.15460	35.43570	32.95480	K562	SRSF1
SPTA1	ENSG00000163554.7	4992.84130	3503.74690	0.51090	3.70440	2.34160	K562	SRSF7
SPTA1	ENSG00000163554.7	5317.76800	3891.81530	0.45030	5.39580	3.20590	K562	SRSF9
SPTA1	ENSG00000163554.7	3550.75270	2908.81660	0.28760	3.16620	1.77520	K562	SSB
SPTA1	ENSG00000163554.7	8697.63220	6653.87050	0.38630	2.99450	1.57430	K562	SSRP1
SPTA1	ENSG00000163554.7	4384.52740	6086.13860	-0.47310	3.20050	1.83560	K562	STAU1
SPTA1	ENSG00000163554.7	4484.49740	3429.01580	0.38710	4.11670	3.10960	K562	SYNCRIP
SPTA1	ENSG00000163554.7	3758.15610	2844.88110	0.40160	4.35200	2.30850	K562	TBRG4
SPTA1	ENSG00000163554.7	2851.91920	2227.53320	0.35640	2.83070	1.88380	K562	TIAL1
SPTA1	ENSG00000163554.7	4189.00970	3416.26610	0.29410	2.67760	1.60650	K562	TRA2A
SPTA1	ENSG00000163554.7	3565.64860	2645.25340	0.43070	3.53160	2.26100	K562	U2AF1
SPTA1	ENSG00000163554.7	5190.81920	2732.40210	0.92570	23.17270	20.84550	K562	U2AF2
SPTA1	ENSG00000163554.7	6998.24970	9311.01920	-0.41190	5.47590	3.53970	K562	UBE2L3
SPTA1	ENSG00000163554.7	2495.66430	3109.39510	-0.31720	2.59750	1.61470	K562	UCHL5
SPTA1	ENSG00000163554.7	3200.86480	4675.52120	-0.54670	16.89340	15.28640	K562	UPF1
SPTA1	ENSG00000163554.7	4713.70900	6702.21080	-0.50780	2.57870	1.34780	K562	UTP18
SPTA1	ENSG00000163554.7	7088.84670	4000.67480	0.82520	6.46880	5.09720	K562	WDR3
SPTA1	ENSG00000163554.7	11195.16910	4160.38190	1.42800	141.50830	138.11590	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SPTA1 is not available on ENCORE database.

17 RBPs can affect the splicing of SPTA1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SPTA1	ENSG00000163554.7	chr1	-	158587326	158587378	158584537	158585193	158589011	158589112	-0.11500	0.00017	0.00478	excluded	K562	SF3B4
SE	SPTA1	ENSG00000163554.7	chr1	-	158624654	158624741	158624435	158624538	158626353	158626446	0.14600	0.00167	0.05461	included	K562	PRPF8
SE	SPTA1	ENSG00000163554.7	chr1	-	158587828	158587846	158587326	158587378	158589011	158589166	0.17500	0.00130	0.01522	included	K562	AQR
SE	SPTA1	ENSG00000163554.7	chr1	-	158607822	158608031	158606430	158606551	158609371	158609476	0.05500	0.00103	0.04045	included	K562	FXR1
SE	SPTA1	ENSG00000163554.7	chr1	-	158620346	158620476	158619645	158619737	158621156	158621258	-0.10700	0.00848	0.09267	excluded	K562	PUS1
SE	SPTA1	ENSG00000163554.7	chr1	-	158607822	158608031	158606430	158606551	158609371	158609476	-0.08800	0.00000	0.00001	excluded	K562	PUS1
SE	SPTA1	ENSG00000163554.7	chr1	-	158624661	158624741	158624400	158624538	158626353	158626446	0.31300	0.00000	0.00004	included	K562	EFTUD2
SE	SPTA1	ENSG00000163554.7	chr1	-	158587828	158587846	158587326	158587378	158589011	158589124	0.30200	0.00000	0.00007	included	K562	U2AF1
SE	SPTA1	ENSG00000163554.7	chr1	-	158620346	158620476	158619645	158619737	158621156	158621258	0.28900	0.00000	0.00000	included	K562	HNRNPL
SE	SPTA1	ENSG00000163554.7	chr1	-	158607822	158608031	158606430	158606551	158609371	158609476	-0.07300	0.00002	0.00245	excluded	K562	HNRNPL
SE	SPTA1	ENSG00000163554.7	chr1	-	158607822	158608031	158606430	158606551	158609371	158609476	-0.08600	0.00000	0.00004	excluded	K562	HNRNPUL1
SE	SPTA1	ENSG00000163554.7	chr1	-	158587828	158587846	158587326	158587378	158589011	158589124	0.17700	0.00309	0.04949	included	K562	U2AF2
SE	SPTA1	ENSG00000163554.7	chr1	-	158620346	158620476	158619645	158619737	158621156	158621258	-0.21500	0.00001	0.00045	excluded	K562	U2AF2
SE	SPTA1	ENSG00000163554.7	chr1	-	158607822	158608031	158606430	158606551	158609371	158609476	-0.08800	0.00161	0.05401	excluded	K562	TARDBP
SE	SPTA1	ENSG00000163554.7	chr1	-	158620346	158620476	158619645	158619737	158621156	158621258	-0.21800	0.00001	0.00065	excluded	K562	HNRNPU
SE	SPTA1	ENSG00000163554.7	chr1	-	158620346	158620476	158619645	158619737	158621156	158621258	0.15700	0.00009	0.00603	included	K562	SF3B1
SE	SPTA1	ENSG00000163554.7	chr1	-	158587828	158587846	158587326	158587378	158589011	158589124	0.19100	0.00002	0.00570	included	K562	ZC3H8
SE	SPTA1	ENSG00000163554.7	chr1	-	158620346	158620476	158619645	158619737	158621156	158621258	-0.13900	0.00022	0.00530	excluded	K562	HNRNPC
A3SS	SPTA1	ENSG00000163554.7	chr1	-	158613111	158613285	158613111	158613215	158614042	158614186	0.12700	0.00001	0.00288	longer	K562	EFTUD2
A3SS	SPTA1	ENSG00000163554.7	chr1	-	158655029	158655137	158655029	158655123	158656283	158656398	-0.05900	0.00111	0.05621	shorter	K562	SF3B4
A3SS	SPTA1	ENSG00000163554.7	chr1	-	158641132	158641277	158641132	158641243	158641848	158641986	0.06600	0.00016	0.00133	longer	K562	AQR
A3SS	SPTA1	ENSG00000163554.7	chr1	-	158606430	158606593	158606430	158606551	158607822	158608031	0.05900	0.00010	0.08166	longer	K562	LARP4
A5SS	SPTA1	ENSG00000163554.7	chr1	-	158654897	158655137	158655060	158655137	158653160	158653286	0.15500	0.00564	0.07984	longer	K562	AQR
A5SS	SPTA1	ENSG00000163554.7	chr1	-	158654897	158655137	158655060	158655137	158653160	158653286	-0.21200	0.00059	0.04865	shorter	K562	HNRNPC
A5SS	SPTA1	ENSG00000163554.7	chr1	-	158654897	158655137	158655060	158655137	158653160	158653286	0.13800	0.00036	0.03527	longer	K562	RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SPTA1

General Information

Functions

Localization

Domains (AlphaFold: SPTA1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SPTA1 is not avaliable on ENCORE database.

29 proteins are bound to SPTA1 RNA:

eCLIP assay for SPTA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SPTA1 is not available on ENCORE database.

82 RBPs can affect the gene expression of SPTA1 :

The Knockdown/knockout RNA-Seq assay for SPTA1 is not available on ENCORE database.

17 RBPs can affect the splicing of SPTA1 :

The Knockdown/knockout RNA-Seq assay for SPTA1 is not avaliable on ENCORE database.