HERC1

General Information

Gene Name       : HERC1
Gene ID             : ENSG00000103657.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HERC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HERC1ENSG00000103657.1337.5438.2637.90ENCSR000AEF
HepG2HERC1ENSG00000103657.1320.1416.0618.10ENCSR985KAT
K562HERC1ENSG00000103657.1357.0960.4658.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HERC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HERC1 RNA is bound by 44 proteins.  







eCLIP assay for HERC1 is not avaliable on ENCORE database.





44 proteins are bound to HERC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr156391592563915938-3'-UTR,CDS,intron-Distal4.154287.39346K562DDX24
chr156391650363916573-3'-UTR,CDS,intron-Distal,intron-Proximal5.1855310.52912K562SF3B4
chr156390098863901060-3'-UTR,intron-Distal4.8631911.26132K562ZC3H11A
chr156390083263900877-3'-UTR,intron-Distal6.1022112.28195K562ZC3H11A
chr156392277063922841-3'-UTR,CDS,intron-Distal,intron-Proximal3.379747.49900K562U2AF2
chr156392279063922842-3'-UTR,CDS,intron-Distal,intron-Proximal4.566614.79708HepG2U2AF2
chr156391501063915080-3'-UTR,CDS,intron-Distal,intron-Proximal3.106163.00168K562XRCC6
chr156390088663900929-3'-UTR,intron-Distal5.445028.30600K562ZC3H11A
chr156390124563901337-3'-UTR,CDS,intron-Distal3.137925.61744K562FXR2
chr156390123763901316-3'-UTR,CDS,intron-Distal3.172044.74936K562IGF2BP2
chr156390092963900988-3'-UTR,intron-Distal4.329639.97386K562ZC3H11A
chr156392277863922840-3'-UTR,CDS,intron-Distal,intron-Proximal3.101905.98757K562U2AF1
chr156391502563915077-3'-UTR,CDS,intron-Distal,intron-Proximal5.5669214.58110K562DDX24
chr156392830963928341-5'-UTR,CDS,intron-Distal5.2116811.01364K562DDX24
chr156392831563928340-5'-UTR,CDS,intron-Distal3.751425.55508K562BUD13
chr156412603264126109-5'-UTR,intron-Distal,intron-Proximal3.938359.12426K562FXR2
chr156392913963929189-5'-UTR,intron-Distal,intron-Proximal4.738344.58968K562PRPF8
chr156392832963928337-5'-UTR,CDS,intron-Distal3.752115.14848K562ZNF622
chr156392096363921070-CDS,intron-Distal,intron-Proximal4.311919.01749K562SF3B4
chr156398616863986263-CDS,intron-Distal3.606395.34040K562TRA2A
chr156395522863955294-CDS,intron-Distal3.343377.39995HepG2BCLAF1
chr156395208263952198-CDS,intron-Distal,intron-Proximal3.472206.23623K562GPKOW
chr156395521963955290-CDS,intron-Distal4.087895.07849K562FXR1
chr156398282663982887-CDS,intron-Distal,intron-Proximal3.200715.28154K562SF3B4
chr156395536063955430-CDS,intron-Distal,intron-Proximal4.7744224.78736K562AQR
chr156403911464039181-CDS,intron-Distal,intron-Proximal3.385993.28147K562GRWD1
chr156401078064010805-CDS,intron-Distal4.559255.23082K562DDX24
chr156392096563921033-CDS,intron-Distal,intron-Proximal3.9038811.67142K562BUD13
chr156398835563988379-CDS,intron-Distal3.491343.68471HepG2BCLAF1
chr156395203863952123-CDS,intron-Distal5.2566015.86994HepG2BCLAF1
chr156395826063958350-CDS,intron-Distal,intron-Proximal3.462515.20984HepG2EIF3H
chr156404742664047482-CDS,intron-Distal,intron-Proximal3.675029.80107K562DDX24
chr156391813963918190-CDS,intron-Distal,intron-Proximal3.654755.04653K562SF3B4
chr156398186063981875-CDS,intron-Distal3.609524.25142K562BUD13
chr156398184363981868-CDS,intron-Distal3.703767.89918K562DDX24
chr156404517864045213-CDS,intron-Distal3.810054.93978HepG2BCLAF1
chr156404195064042001-CDS,intron-Distal,intron-Proximal4.5984626.13147K562SF3B4
chr156393561663935676-CDS,intron-Distal3.873114.99898K562FXR2
chr156395408263954169-CDS,intron-Distal3.0933110.77181K562ZNF622
chr156395667563956710-CDS,intron-Distal3.898438.70187K562ZNF622
chr156396667263966724-CDS,intron-Distal3.949116.49194K562FXR2
chr156395522363955266-CDS,intron-Distal4.683739.64961K562DDX24
chr156394852963948550-CDS,intron-Distal3.525913.99381K562BUD13
chr156399897863999014-CDS,intron-Distal,intron-Proximal3.935416.82493K562DDX24
chr156395414163954219-CDS,intron-Distal3.0070318.10449K562UCHL5
chr156394648163946558-CDS,intron-Distal,intron-Proximal5.667368.88118K562AQR
chr156395671563956781-CDS,intron-Distal3.1615216.34406K562ZNF622
chr156397047063970519-CDS,intron-Distal4.570014.29511HepG2EIF3H
chr156398463863984701-CDS,intron-Distal5.6508411.17302HepG2BCLAF1
chr156395407763954141-CDS,intron-Distal3.7011614.51272K562UCHL5
chr156406694464067014-CDS,intron-Distal5.144588.78366K562RBM15
chr156395198063952101-CDS,intron-Distal4.565266.01390HepG2GRWD1
chr156392099663921013-CDS,intron-Distal3.212024.37507K562DDX24
chr156404868464048722-CDS,intron-Distal4.136113.48187K562RBM15
chr156396726363967380-CDS,intron-Distal,intron-Proximal5.174116.15877HepG2U2AF2
chr156395199063952072-CDS,intron-Distal3.1317410.30656K562DDX24
chr156395412663954172-CDS,intron-Distal3.602886.36847HepG2BCLAF1
chr156395820263958308-CDS,intron-Distal3.078623.95685K562SRSF1
chr156395414563954184-CDS,intron-Distal3.385648.67013K562DDX24
chr156394029163940333-CDS,intron-Distal4.981968.70311K562DDX24
chr156404888964048952-CDS,intron-Distal,intron-Proximal4.2962012.36209K562BUD13
chr156397281863972895-CDS,intron-Distal3.854614.30147K562FXR1
chr156395820263958230-CDS,intron-Distal4.174036.95786K562UCHL5
chr156403916164039236-CDS,intron-Distal3.305117.69141K562RBM15
chr156404525364045282-CDS,intron-Distal3.497887.50303K562UCHL5
chr156400499464005019-CDS,intron-Distal3.692696.26935K562DDX24
chr156393079863930915-CDS,intron-Distal,intron-Proximal3.409886.85960K562KHSRP
chr156404670864046736-CDS,intron-Distal4.176488.98140K562DDX24
chr156404166964041729-CDS,intron-Distal,intron-Proximal5.4913410.24913HepG2BCLAF1
chr156396720163967349-CDS,intron-Distal,intron-Proximal3.241276.55976K562RBM15
chr156406695564067030-CDS,intron-Distal4.373517.36864HepG2EIF3H
chr156395319463953236-CDS,intron-Distal,intron-Proximal3.637033.39716K562U2AF2
chr156396174863961770-CDS,intron-Distal4.120826.46803K562UCHL5
chr156395523563955261-CDS,intron-Distal5.4604910.17900K562ZNF622
chr156396728263967383-CDS,intron-Distal,intron-Proximal3.605573.76069K562U2AF1
chr156393237963932453-CDS,intron-Distal3.708673.55391K562FXR1
chr156399108863991156-CDS,intron-Distal3.611847.83567HepG2BCLAF1
chr156395194963952021-CDS,intron-Distal3.027015.29004K562GRWD1
chr156390855863908649-CDS,intron-Distal,intron-Proximal4.985257.13585K562PRPF8
chr156400856364008617-CDS,intron-Distal5.1002516.58628K562UCHL5
chr156405635864056387-CDS,intron-Distal3.002385.62120K562ZNF622
chr156395196463952063-CDS,intron-Distal3.5368712.50248K562UCHL5
chr156393376363933843-CDS,intron-Distal,intron-Proximal4.338517.87748K562PUM2
chr156400579764005862-CDS,intron-Distal3.3793211.95094K562DDX24
chr156395416963954219-CDS,intron-Distal3.7586011.88579K562ZNF622
chr156395518063955258-CDS,intron-Distal,intron-Proximal4.336174.31023HepG2LIN28B
chr156395410663954222-CDS,intron-Distal,intron-Proximal3.500037.25344K562ZNF800
chr156400850064008515-CDS,intron-Distal,intron-Proximal3.041763.28075K562GRWD1
chr156402169564021791-CDS,intron-Distal,intron-Proximal4.651745.51992K562IGF2BP1
chr156395196363952038-CDS,intron-Distal4.4488211.55000HepG2BCLAF1
chr156394353063943576-CDS,intron-Distal4.231698.43090K562DDX24
chr156396664163966719-CDS,intron-Distal3.647176.38655K562GRWD1
chr156391831363918381-CDS,intron-Distal,intron-Proximal5.0208412.70303K562AQR
chr156399899063999038-CDS,intron-Distal,intron-Proximal3.770686.39986K562SF3B4
chr156395407563954177-CDS,intron-Distal3.227819.66926K562GRWD1
chr156400561264005634-CDS,intron-Distal4.720986.36164K562DDX24
chr156404194264041999-CDS,intron-Distal,intron-Proximal3.117775.93881K562BUD13
chr156393255063932618-CDS,intron-Distal3.070983.06445HepG2EIF3D
chr156400850364008520-CDS,intron-Distal3.260776.80450K562UCHL5
chr156395396763954029-CDS,intron-Distal3.250859.21267K562UCHL5
chr156402169564021789-CDS,intron-Distal,intron-Proximal4.0763011.64153HepG2BCLAF1
chr156393072363930733-CDS,intron-Distal3.759995.21950K562DDX24
chr156404001964040072-CDS,intron-Distal,intron-Proximal3.259914.28417K562U2AF2
chr156390868263908729-CDS,intron-Distal3.064763.36034K562SRSF1
chr156395534663955409-CDS,intron-Distal,intron-Proximal3.137034.26865K562U2AF2
chr156400853264008563-CDS,intron-Distal3.524008.91541K562UCHL5
chr156395411863954197-CDS,intron-Distal3.981275.45976K562MTPAP
chr156402146664021499-CDS,intron-Distal3.366756.67170K562ZNF622
chr156396464963964696-CDS,intron-Distal,intron-Proximal4.234824.98250K562AQR
chr156398699363987036-CDS,intron-Distal3.202955.34378K562YBX3
chr156395416963954221-CDS,intron-Distal,intron-Proximal5.032898.55117K562LIN28B
chr156395517963955253-CDS,intron-Distal,intron-Proximal6.4545527.73186K562LIN28B
chr156395090863950956-CDS,intron-Distal,intron-Proximal5.324687.81477K562SF3B4
chr156393524463935342-CDS,intron-Distal,intron-Proximal3.182843.31830K562KHSRP
chr156402153964021567-CDS,intron-Distal4.665304.78529HepG2BCLAF1
chr156391823363918305-CDS,intron-Distal3.251188.25963K562LIN28B
chr156400580264005855-CDS,intron-Distal3.948827.58784HepG2BCLAF1
chr156398845463988536-CDS,intron-Distal3.123198.31437K562UCHL5
chr156392266363922684-CDS,intron-Distal,intron-Proximal4.192697.88406K562DDX24
chr156404190664041976-CDS,intron-Distal3.585157.01246HepG2BCLAF1
chr156401098964011056-CDS,intron-Distal,intron-Proximal3.549087.89260HepG2BCLAF1
chr156397262963972745-CDS,intron-Distal,intron-Proximal3.5608613.06026K562AQR
chr156400850864008606-CDS,intron-Distal3.393145.79926HepG2BCLAF1
chr156396679863966853-CDS,intron-Distal,intron-Proximal4.411015.17013K562RBM15
chr156393062263930643-CDS,intron-Distal5.636027.12981K562DDX24
chr156395210163952133-CDS,intron-Distal3.052155.92720K562ZNF622
chr156393091063930935-CDS,intron-Distal4.663258.51520K562DDX24
chr156397006663970153-CDS,intron-Distal3.678563.15756HepG2EIF3H
chr156395668963956781-CDS,intron-Distal4.211703.82000HepG2GRWD1
chr156395413763954210-CDS,intron-Distal4.057414.23295HepG2GRWD1
chr156398274063982776-CDS,intron-Distal4.157826.46803K562UCHL5
chr156395535863955418-CDS,intron-Distal,intron-Proximal3.5950111.75242K562BUD13
chr156395820763958329-CDS,intron-Distal3.548786.76654K562GRWD1
chr156400853764008595-CDS,intron-Distal3.8608815.11363K562DDX24
chr156404194064041998-CDS,intron-Distal,intron-Proximal3.6775010.90392K562U2AF1
chr156402172064021798-CDS,intron-Distal3.4592512.56573K562ZNF622
chr156395523063955257-CDS,intron-Distal3.056799.60060K562UCHL5
chr156392604763926092-CDS,intron-Distal,intron-Proximal4.3657410.09214K562DDX24
chr156397869163978735-CDS,intron-Distal,intron-Proximal3.929018.15794K562BUD13
chr156391822763918278-CDS,intron-Distal4.057854.48692K562YBX3
chr156390872963908787-CDS,intron-Distal3.341813.87268K562SRSF1
chr156404856164048666-CDS,intron-Distal,intron-Proximal3.477848.87315K562EFTUD2
chr156395521563955235-CDS,intron-Distal3.657606.25299K562ZNF622
chr156393060763930655-CDS,intron-Distal,intron-Proximal3.980864.70007K562FXR2
chr156400854364008608-CDS,intron-Distal4.754993.33922HepG2EIF3H
chr156391831063918362-CDS,intron-Distal,intron-Proximal4.560879.52818K562BUD13
chr156396180263961878-CDS,intron-Distal3.930343.77127K562FXR1
chr156395526663955321-CDS,intron-Distal3.596999.86138K562ZNF622
chr156398622563986249-CDS,intron-Distal3.255785.17903K562UCHL5
chr156394356363943573-CDS,intron-Distal4.936846.29310K562ZNF622
chr156397050763970589-CDS,intron-Distal,intron-Proximal3.015693.10539K562U2AF2
chr156397291863972964-CDS,intron-Distal3.404329.24221K562DDX24
chr156406692864067000-CDS,intron-Distal3.308353.28147K562GRWD1
chr156393377363933842-CDS,intron-Distal4.893746.99355K562LIN28B
chr156396661163966720-CDS,intron-Distal3.240405.95627K562RBM15
chr156396726863967316-CDS,intron-Distal3.984404.11564K562U2AF2
chr156404670364046735-CDS,intron-Distal,intron-Proximal3.916554.17155HepG2BCLAF1
chr156398663163986690-CDS,intron-Distal4.503988.80935HepG2BCLAF1
chr156404193264041999-CDS,intron-Distal,intron-Proximal5.2947123.43420K562U2AF2
chr156404184764041867-CDS,intron-Distal4.593114.78529HepG2BCLAF1
chr156395211363952133-CDS,intron-Distal4.397007.39346K562DDX24
chr156400497564005001-CDS,intron-Distal3.450113.68471HepG2BCLAF1
chr156402170364021768-CDS,intron-Distal3.7242516.37247K562DDX24
chr156400555664005576-CDS,intron-Distal3.334996.02234K562UCHL5
chr156394799363948080-CDS,intron-Distal4.216544.50540K562FXR1
chr156404680464046846-CDS,intron-Distal3.202257.44737K562DDX24
chr156393563063935737-CDS,intron-Distal4.2240621.08649K562DDX24
chr156390464463904720-CDS,intron-Distal4.334708.92211K562FXR2
chr156402700664027054-CDS,intron-Distal,intron-Proximal3.018004.86845K562BUD13
chr156390472963904756-CDS,intron-Distal,intron-Proximal4.691836.09979K562FXR2
chr156396161863961715-intron-Distal,intron-Proximal3.9722116.03139K562KHSRP
chr156403978864039847-intron-Distal,intron-Proximal3.052974.83983K562KHSRP
chr156405031764050374-intron-Distal,intron-Proximal4.623634.13847K562AQR
chr156412039264120503-intron-Distal4.037847.80454K562PTBP1
chr156398455363984610-intron-Distal,intron-Proximal4.942344.86944K562AQR
chr156391511363915188-intron-Distal,intron-Proximal5.1715910.28433K562KHSRP
chr156397056763970626-intron-Distal,intron-Proximal5.693168.93732K562SF3B4
chr156398609163986133-intron-Distal,intron-Proximal4.281204.22101K562PRPF8
chr156408676564086818-intron-Distal3.711885.85006K562NONO
chr156395656963956669-intron-Distal,intron-Proximal4.1875523.60578K562AQR
chr156397092763971028-intron-Distal3.884413.47293K562U2AF2
chr156403301064033097-intron-Distal4.379475.16344K562SAFB2
chr156399882863998893-intron-Distal,intron-Proximal4.285924.31512K562KHSRP
chr156391716563917218-intron-Distal4.410304.79477K562KHSRP
chr156401089364010947-intron-Distal,intron-Proximal6.0242410.47189K562SF3B4
chr156405028864050353-intron-Distal,intron-Proximal4.822236.28383K562KHSRP
chr156401190264012025-intron-Distal4.472209.78835K562HNRNPL
chr156403984564039908-intron-Distal,intron-Proximal4.2777312.13872K562PRPF8
chr156395172963951825-intron-Distal3.220303.73266K562KHSRP
chr156403812764038205-intron-Distal3.453205.35818K562SAFB2
chr156411306664113165-intron-Distal3.033246.89326K562KHSRP
chr156391585563915922-intron-Distal,intron-Proximal3.823305.25185K562PRPF8
chr156393741563937497-intron-Distal3.720305.14864K562KHSRP
chr156390855863908628-intron-Distal,intron-Proximal5.369557.28294K562AQR
chr156402938264029436-intron-Distal3.865514.22415K562PTBP1
chr156410505164105107-intron-Distal3.881263.92684K562KHSRP
chr156396081363960866-intron-Distal3.032857.25130K562KHSRP
chr156403422864034313-intron-Distal4.673726.47232K562SAFB2
chr156406456764064649-intron-Distal4.270074.58794K562KHSRP
chr156392079763920872-intron-Distal,intron-Proximal5.521569.23760K562AQR
chr156396110663961178-intron-Distal4.6940620.75306K562KHSRP
chr156401181464011859-intron-Distal4.524603.91475K562PTBP1
chr156403363564033671-intron-Distal3.761503.01412K562SAFB2
chr156396125563961283-intron-Distal3.746308.05068K562KHSRP
chr156396099563961060-intron-Distal3.6814911.88954K562KHSRP
chr156391694463917121-intron-Distal3.195136.60508K562KHSRP
chr156403574164035858-intron-Distal3.034525.98870K562SAFB2
chr156398595763986031-intron-Distal3.345164.13620K562KHSRP
chr156398199863982049-intron-Distal3.698954.71620K562LSM11
chr156401794564018090-intron-Distal3.607156.67026K562KHSRP
chr156403972764039788-intron-Distal4.8378710.08597K562PRPF8
chr156396117863961237-intron-Distal3.6078511.66745K562KHSRP
chr156400086464001037-intron-Distal5.7993314.74977K562KHSRP
chr156404392764044027-intron-Distal3.914649.31101K562KHSRP
chr156397835863978431-intron-Distal4.024144.31512K562KHSRP
chr156396106063961079-intron-Distal3.344337.46934K562KHSRP
chr156393762463937682-intron-Distal,intron-Proximal4.138505.97994K562AQR
chr156405608464056146-intron-Distal3.120293.28806K562KHSRP
chr156404849164048599-intron-Distal,intron-Proximal5.8281911.44757K562PRPF8
chr156395642463956490-intron-Distal3.550725.32296K562PRPF8
chr156395387863953950-intron-Distal,intron-Proximal4.708598.01338K562AQR
chr156391482463914860-intron-Distal3.575255.53307K562ZNF622
chr156403373364033806-intron-Distal3.971528.00568K562SAFB2
chr156407985164079951-intron-Distal4.087084.07991K562ILF3
chr156412587264125970-intron-Distal4.771367.00934K562TARDBP
chr156397095263971049-intron-Distal3.558088.44734K562KHSRP
chr156398684163986928-intron-Distal,intron-Proximal4.421355.19823K562KHSRP
chr156403981664039893-intron-Distal,intron-Proximal4.352614.39969K562TARDBP
chr156394188063941924-intron-Distal,intron-Proximal5.319796.75320K562AQR
chr156396107963961106-intron-Distal4.030107.90970K562KHSRP
chr156404375864043840-intron-Distal3.359093.32861HepG2U2AF2
chr156412588664125967-intron-Distal3.312513.48123K562XRN2
chr156396731663967385-intron-Distal,intron-Proximal4.2150015.31926K562U2AF2
chr156391431463914421-intron-Distal3.545049.97367K562UCHL5
chr156392600063926047-intron-Distal,intron-Proximal4.924418.52787K562AQR
chr156391482863914867-intron-Distal5.340749.17286K562UCHL5
chr156391630263916357-intron-Distal,intron-Proximal5.243366.04760K562AQR
chr156403982664039899-intron-Distal,intron-Proximal5.3491137.06302K562EFTUD2
chr156401074964010772-intron-Distal,intron-Proximal4.603314.65563K562AQR
chr156412587764125995-intron-Distal5.1159821.08162K562EIF4G2
chr156400593364006016-intron-Distal,intron-Proximal3.211905.62342K562KHSRP
chr156397254063972606-intron-Distal4.192335.19445K562QKI
chr156394860163948712-intron-Distal,intron-Proximal3.770076.25598K562KHSRP
chr156392965463929699-intron-Distal,intron-Proximal5.060865.69951K562AQR
chr156396742363967510-intron-Distal3.5124210.37441K562KHSRP
chr156403526664035323-intron-Distal4.366973.32022K562UCHL5
chr156393349263933601-intron-Distal,intron-Proximal4.006365.24441K562SMNDC1
chr156400438564004513-intron-Distal3.173804.89694K562MATR3
chr156395798563958082-intron-Distal,intron-Proximal4.093913.26999K562KHSRP
chr156391726263917347-intron-Distal5.193459.16624K562TARDBP
chr156404200164042038-intron-Distal,intron-Proximal5.2879021.65941K562SF3B4
chr156397114563971248-intron-Distal3.485057.89473K562QKI
chr156412191664122054-intron-Distal3.375843.18966K562MATR3
chr156395301163953112-intron-Distal,intron-Proximal5.810859.99398K562QKI
chr156396646963966516-intron-Distal,intron-Proximal3.619165.35619K562AQR
chr156396095263960968-intron-Distal4.117357.90970K562KHSRP
chr156412579864125877-intron-Distal4.657218.44255K562EIF4G2
chr156395328163953381-intron-Distal,intron-Proximal4.281004.76003K562KHSRP
chr156393756463937647-intron-Distal,intron-Proximal3.062554.74253K562KHSRP
chr156392596363925997-intron-Distal,intron-Proximal3.667363.52230K562AQR
chr156396123763961255-intron-Distal3.021324.74253K562KHSRP
chr156400077564000844-intron-Distal4.4924611.71872K562KHSRP
chr156403528564035375-intron-Distal3.220865.34137K562SAFB2
chr156403457164034680-intron-Distal3.054405.78806K562SAFB2
chr156390895763909057-intron-Distal,intron-Proximal4.111267.52225K562UCHL5
chr156400875864008819-intron-Distal,intron-Proximal3.399074.93120K562KHSRP
chr156392109263921153-intron-Distal,intron-Proximal3.166263.07751K562KHSRP
chr156410546364105548-intron-Distal5.064867.51195K562TARDBP
chr156398148163981660-intron-Distal4.638545.51760K562MATR3
chr156403899264039107-intron-Distal,intron-Proximal3.976467.05443K562KHSRP
chr156396128363961333-intron-Distal3.310966.28168K562KHSRP
chr156403983164039901-intron-Distal,intron-Proximal3.120415.62171K562AQR
chr156392258163922660-intron-Distal,intron-Proximal4.639738.52787K562AQR
chr156398153963981607-intron-Distal4.796764.40618K562PTBP1
chr156392079563920838-intron-Distal,intron-Proximal4.267203.85435K562PRPF8
chr156396086663960920-intron-Distal5.2295018.19875K562KHSRP
chr156401069764010749-intron-Distal,intron-Proximal3.757374.88100K562AQR
chr156391481963914943-intron-Distal,intron-Proximal3.288543.95154K562SAFB2
chr156404791764047978-intron-Distal4.483145.83809K562U2AF2
chr156401872564018811-intron-Distal3.831493.66668K562KHSRP
chr156404851564048610-intron-Distal,intron-Proximal4.0552412.43138K562KHSRP
chr156412030964120497-intron-Distal3.071993.32889K562MATR3
chr156406662564066857-intron-Distal,intron-Proximal3.501359.63788K562KHSRP
chr156396134463961405-intron-Distal3.424856.60508K562KHSRP
chr156399910163999252-intron-Distal,intron-Proximal4.1427419.00181K562KHSRP
chr156401070364010738-intron-Distal,intron-Proximal4.430984.53454K562PRPF8
chr156400402964004116-intron-Distal4.053453.53404K562HNRNPM
chr156396070163960746-intron-Distal3.177555.57010K562KHSRP
chr156400394564004095-intron-Distal3.079744.98641K562TARDBP
chr156395904963959102-intron-Distal3.745623.37809K562HNRNPL
chr156405093764050977-intron-Distal3.285923.46531K562KHSRP
chr156406474764064798-intron-Distal3.428283.30744K562PTBP1
chr156401024164010309-intron-Distal3.898153.34609K562TARDBP
chr156397214063972190-intron-Distal,intron-Proximal3.515954.35635K562PRPF8
chr156403981064039896-intron-Distal,intron-Proximal5.036085.70963K562RBM22
chr156405686664056947-intron-Distal3.162473.56085K562LSM11
chr156398606963986156-intron-Distal,intron-Proximal4.786906.58261K562KHSRP
chr156390782863907879-intron-Distal,intron-Proximal3.977584.14103K562KHSRP
chr156402688964026901-intron-Distal,intron-Proximal5.4515415.88168K562AQR
chr156412579664125886-intron-Distal3.695285.05994K562XRN2
chr156407124264071306-intron-Distal5.187576.57566K562PTBP1
chr156403452264034571-intron-Distal3.309943.67498K562SAFB2
chr156398493763985011-intron-Distal3.977584.14103K562KHSRP
chr156400426864004425-intron-Distal4.953849.72850K562QKI
chr156400391564004012-intron-Distal4.283174.53244K562HNRNPM
chr156395658963956666-intron-Distal,intron-Proximal5.152458.34848K562PRPF8
chr156396092063960952-intron-Distal4.6193611.58574K562KHSRP
chr156393545563935562-intron-Distal,intron-Proximal4.157533.92684K562KHSRP
chr156396737563967423-intron-Distal,intron-Proximal3.284357.36118K562KHSRP
chr156403394264034048-intron-Distal3.970908.43763K562SAFB2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HERC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HERC1 is not available on ENCORE database.

  • 82 RBPs can affect the levels of HERC1.  








The Knockdown/knockout RNA-Seq assay for HERC1 is not available on ENCORE database.





82 RBPs can affect the gene expression of HERC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HERC1ENSG00000103657.91837.971401478.463700.313901.799401.36020HepG2AKAP1
HERC1ENSG00000103657.92395.731401828.671900.389606.694305.69860HepG2AUH
HERC1ENSG00000103657.9574.590201066.84820-0.892709.347407.57780HepG2BCCIP
HERC1ENSG00000103657.91248.54110973.605200.358703.219402.39360HepG2CALR
HERC1ENSG00000103657.9741.814301037.21310-0.483603.169702.07930HepG2YBX3
HERC1ENSG00000103657.91586.066201246.988700.346905.579804.57770HepG2DAZAP1
HERC1ENSG00000103657.91055.836301271.22040-0.267803.126902.24430HepG2DDX19B
HERC1ENSG00000103657.9746.707901009.47870-0.435006.356605.42700HepG2DNAJC2
HERC1ENSG00000103657.91830.568401169.542400.646206.980506.06920HepG2EIF2S1
HERC1ENSG00000103657.91494.976601230.274400.281003.123902.24420HepG2EIF4G1
HERC1ENSG00000103657.91866.045901407.901400.406302.757601.98900HepG2FIP1L1
HERC1ENSG00000103657.91052.68920798.347300.398903.240702.39410HepG2FUBP3
HERC1ENSG00000103657.91505.601301209.706300.315601.924401.36460HepG2G3BP1
HERC1ENSG00000103657.91532.879201278.759300.261402.744002.02910HepG2HNRNPF
HERC1ENSG00000103657.91493.673901224.930000.286101.927301.33860HepG2HNRNPK
HERC1ENSG00000103657.91579.268001229.641200.360902.536001.88740HepG2IGF2BP2
HERC1ENSG00000103657.9912.758001160.52510-0.346504.841503.89490HepG2ILF2
HERC1ENSG00000103657.91048.526501256.47060-0.261003.040801.97540HepG2KIF1C
HERC1ENSG00000103657.9878.907801124.57260-0.355604.023103.02290HepG2PARN
HERC1ENSG00000103657.9798.698801013.34220-0.343403.307902.50800HepG2PPIL4
HERC1ENSG00000103657.9577.62080809.09280-0.486203.406302.51820HepG2PRPF8
HERC1ENSG00000103657.91437.729101253.036400.198302.309501.75790HepG2PUM1
HERC1ENSG00000103657.91534.933901252.111000.293702.719802.05420HepG2PUM2
HERC1ENSG00000103657.92047.558801365.061800.5848010.027808.94340HepG2QKI
HERC1ENSG00000103657.91514.363701754.85790-0.212601.912001.46030HepG2RBM22
HERC1ENSG00000103657.91661.115701238.872300.423003.294002.56410HepG2RBM25
HERC1ENSG00000103657.9859.584501246.16660-0.535804.545103.25320HepG2RBM27
HERC1ENSG00000103657.9595.31310762.73150-0.357502.511301.92300HepG2RPS19
HERC1ENSG00000103657.91168.617901542.27340-0.400302.264901.53950HepG2RPS3A
HERC1ENSG00000103657.9851.493101173.17980-0.462403.617102.38100HepG2RPS5
HERC1ENSG00000103657.9784.004701011.77620-0.368004.200803.43570HepG2SAFB2
HERC1ENSG00000103657.91440.527901131.829100.347804.556003.69060HepG2SLBP
HERC1ENSG00000103657.9852.640001179.89520-0.468708.089007.08090HepG2SMN1
HERC1ENSG00000103657.91572.174901369.699900.198801.855601.44610HepG2SRSF1
HERC1ENSG00000103657.91307.916001114.316800.231002.285401.77370HepG2SRSF9
HERC1ENSG00000103657.91002.125501341.70660-0.421002.541701.49350HepG2STIP1
HERC1ENSG00000103657.91648.297801325.441300.314404.613003.84690HepG2SUCLG1
HERC1ENSG00000103657.91557.367501231.117000.339003.852103.20920HepG2TAF15
HERC1ENSG00000103657.91514.901001131.252900.421204.574903.50760HepG2TIA1
HERC1ENSG00000103657.9812.067401103.94380-0.443004.699404.08270HepG2TIAL1
HERC1ENSG00000103657.9903.037501113.83970-0.302703.234102.63500HepG2TRIM56
HERC1ENSG00000103657.91811.621501204.374800.588906.654905.69370HepG2U2AF1
HERC1ENSG00000103657.91835.152301220.664700.588105.696004.46800HepG2UBE2L3
HERC1ENSG00000103657.9297.16140616.81680-1.0536011.9081010.35000HepG2UCHL5
HERC1ENSG00000103657.9542.84080956.08990-0.816606.159104.61490HepG2UPF2
HERC1ENSG00000103657.91267.096001570.58330-0.309804.012803.31100HepG2UTP3
HERC1ENSG00000103657.9529.037801027.88950-0.9582011.9905010.50400HepG2XRN2
HERC1ENSG00000103657.91383.279801079.693200.357405.131504.26490HepG2ZC3H8
HERC1ENSG00000103657.95012.776107146.25460-0.5116015.8316014.58810K562AGGF1
HERC1ENSG00000103657.95870.025007852.74780-0.419804.240202.96850K562AKAP8
HERC1ENSG00000103657.95069.063006344.64720-0.323802.552701.98390K562AQR
HERC1ENSG00000103657.96011.757708540.09100-0.506509.438807.25210K562CCDC124
HERC1ENSG00000103657.92633.488603079.22100-0.225602.332601.37710K562CSTF2
HERC1ENSG00000103657.96121.016207050.37410-0.203902.391101.77900K562DDX47
HERC1ENSG00000103657.96342.785708001.55020-0.335205.675804.36670K562DKC1
HERC1ENSG00000103657.93980.143804805.22760-0.271803.899003.06720K562EIF2S2
HERC1ENSG00000103657.93012.685003727.35600-0.307103.991303.04390K562EIF3G
HERC1ENSG00000103657.93216.846804740.74930-0.559508.105806.57240K562FIP1L1
HERC1ENSG00000103657.93987.817704886.51020-0.293204.594403.84180K562FXR1
HERC1ENSG00000103657.93785.013106403.37090-0.7585017.0265015.11250K562GRSF1
HERC1ENSG00000103657.94104.253003514.146400.223801.985701.46890K562HNRNPC
HERC1ENSG00000103657.92257.662803899.25190-0.7884011.014208.85550K562HNRNPM
HERC1ENSG00000103657.96318.513505292.816600.255403.251202.28580K562HNRNPU
HERC1ENSG00000103657.93091.895306427.56480-1.0558026.0179023.83750K562HSPD1
HERC1ENSG00000103657.96498.468607891.39990-0.280202.720601.90310K562KIF1C
HERC1ENSG00000103657.93341.873205351.12270-0.6792013.1053011.16940K562MAGOH
HERC1ENSG00000103657.95860.225007554.07740-0.366304.290002.86560K562MAK16
HERC1ENSG00000103657.96993.086708840.37240-0.338204.023302.89200K562MBNL1
HERC1ENSG00000103657.92673.326903430.85130-0.359903.337101.74880K562PHF6
HERC1ENSG00000103657.93153.007305381.56970-0.7713013.8504011.58390K562PPIG
HERC1ENSG00000103657.91867.825303756.96160-1.0082021.0569018.98890K562PRPF8
HERC1ENSG00000103657.92385.011203150.78350-0.401704.260203.10300K562PSIP1
HERC1ENSG00000103657.93497.918305199.01470-0.5717010.444009.21320K562PTBP1
HERC1ENSG00000103657.98097.684209760.87070-0.269502.559701.77540K562PUF60
HERC1ENSG00000103657.98695.3140010172.51250-0.226403.161902.13730K562PUM2
HERC1ENSG00000103657.94846.405007374.33130-0.605609.040108.10770K562PUS1
HERC1ENSG00000103657.95555.807207185.31180-0.371106.246405.38040K562RBM15
HERC1ENSG00000103657.93619.170604984.76750-0.461905.688204.42870K562RBM22
HERC1ENSG00000103657.92391.522702874.60030-0.265402.465901.53480K562RCC2
HERC1ENSG00000103657.92171.109103826.69500-0.8177011.221609.54540K562RPS19
HERC1ENSG00000103657.93353.023204852.35040-0.533206.420804.81400K562RPS3
HERC1ENSG00000103657.92576.129303841.12690-0.576304.827803.06250K562RRP9
HERC1ENSG00000103657.92930.562003632.20330-0.309703.132201.97910K562SAFB
HERC1ENSG00000103657.92217.228302725.05270-0.297502.593801.61160K562SRFBP1
HERC1ENSG00000103657.93976.868605096.86370-0.358004.503603.60540K562SRSF1
HERC1ENSG00000103657.92928.427704088.94120-0.481608.069606.65940K562SYNCRIP
HERC1ENSG00000103657.93031.802505158.15190-0.7667012.9697011.23370K562TARDBP
HERC1ENSG00000103657.92660.543403219.46240-0.275102.382101.51480K562TRIM56
HERC1ENSG00000103657.95401.241604559.704300.244302.560201.78690K562U2AF2
HERC1ENSG00000103657.97213.122706411.436600.169902.294201.63600K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HERC1 is not available on ENCORE database.





13 RBPs can affect the splicing of HERC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHERC1ENSG00000103657.9chr15-6392172863921896639208756392101463922664639227500.068000.001910.03519includedK562SRSF1
SEHERC1ENSG00000103657.9chr15-6403032964030385640268416402704864039116640392820.127000.007210.09777includedK562SF3B4
SEHERC1ENSG00000103657.9chr15-6396147963961645639585546395867163961736639618970.183000.000330.00829includedK562SF3B4
SEHERC1ENSG00000103657.9chr15-6392172863921896639208756392101463922664639228340.065000.000090.00450includedK562AKAP8L
SEHERC1ENSG00000103657.9chr15-6396518463965278639646946396489363966540639673160.083000.001570.01783includedK562AQR
SEHERC1ENSG00000103657.9chr15-639651846396527863964694639648936396654063967316-0.109000.000010.00127excludedK562FXR1
SEHERC1ENSG00000103657.9chr15-6392172863921896639208756392101463922664639228340.080000.000270.06000includedK562HNRNPA1
SEHERC1ENSG00000103657.9chr15-639249076392501063922664639228346392604663926075-0.112000.000400.00793excludedK562PUS1
SEHERC1ENSG00000103657.9chr15-639585546395867163958117639583496396173663961897-0.080000.005770.06936excludedK562PUS1
SEHERC1ENSG00000103657.9chr15-6396518463965278639646946396489363966540639673160.093000.001760.03565includedK562U2AF1
SEHERC1ENSG00000103657.9chr15-6392172863921896639208756392101463922664639227500.219000.000290.00929includedHepG2SRSF1
SEHERC1ENSG00000103657.9chr15-6403032964030385640268416402704864039116640392820.183000.000590.01287includedK562U2AF2
SEHERC1ENSG00000103657.9chr15-6396147963961645639585546395867163961736639618970.172000.000650.01406includedK562U2AF2
SEHERC1ENSG00000103657.9chr15-639249076392501063922664639228346392604663926075-0.296000.000000.00000excludedK562U2AF2
SEHERC1ENSG00000103657.9chr15-639585546395867163958117639583496396173663961897-0.157000.002370.04015excludedK562U2AF2
SEHERC1ENSG00000103657.9chr15-6392172863921896639208756392101463922664639228340.076000.001380.04823includedK562TARDBP
SEHERC1ENSG00000103657.9chr15-639249076392501063922664639228346392604663926075-0.093000.002780.05900excludedK562RBM15
SEHERC1ENSG00000103657.9chr15-6396518463965278639646946396489363966540639673160.090000.000000.00000includedK562SF3B1
SEHERC1ENSG00000103657.9chr15-6399615363996295639909266399119563998978639990300.382000.000000.00000includedK562HNRNPC
A3SSHERC1ENSG00000103657.9chr15-6391814063918375639181406391835363920875639210850.157000.000010.00007longerK562AQR
A3SSHERC1ENSG00000103657.9chr15-6393515563935294639351556393525763935602639357490.066000.000050.00042longerK562AQR
A3SSHERC1ENSG00000103657.9chr15-6395074263950942639507426395091763951934639521320.054000.017700.08593longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HERC1 is not avaliable on ENCORE database.