CELSR3

General Information

Gene Name       : CELSR3
Gene ID             : ENSG00000008300.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CELSR3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CELSR3ENSG00000008300.160.300.380.34ENCSR000AEF
HepG2CELSR3ENSG00000008300.168.524.726.62ENCSR985KAT
K562CELSR3ENSG00000008300.161.060.770.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CELSR3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CELSR3 RNA is bound by 15 proteins.  







eCLIP assay for CELSR3 is not avaliable on ENCORE database.





15 proteins are bound to CELSR3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34867435748674427-3'-UTR,intron-Distal4.490185.49298HepG2ZC3H11A
chr34867527048675374-3'-UTR,intron-Distal3.167763.50315HepG2UPF1
chr34867489648674979-3'-UTR,intron-Distal3.558824.77152HepG2PABPN1
chr34870011848700165-5'-UTR,intron-Distal4.197475.64032HepG2EIF3H
chr34870001148700083-5'-UTR,CDS,intron-Distal3.964813.28836HepG2GRSF1
chr34870002548700112-5'-UTR,CDS,intron-Distal4.173473.48722HepG2PRPF4
chr34870003648700103-5'-UTR,CDS,intron-Distal4.542449.67123HepG2EIF3H
chr34868791048688014-CDS,intron-Distal,intron-Proximal3.096424.16939HepG2PPIG
chr34869137148691418-CDS,intron-Distal3.393963.93645HepG2PPIG
chr34868095248681012-CDS,intron-Distal,intron-Proximal4.517358.11807HepG2PRPF8
chr34868317348683220-CDS,intron-Distal,intron-Proximal4.584685.52963HepG2PPIG
chr34869449548694576-CDS,intron-Distal4.675645.48415HepG2EIF3H
chr34869458748694664-CDS,intron-Distal3.745265.64032HepG2EIF3H
chr34869990548699989-CDS,intron-Distal4.275988.11960HepG2EIF3H
chr34869936448699444-CDS,intron-Distal4.123473.15756HepG2EIF3H
chr34868215148682204-CDS,intron-Distal4.439934.67689HepG2PPIG
chr34869040048690450-CDS,intron-Distal,intron-Proximal4.791218.44604HepG2PRPF8
chr34868328848683356-CDS,intron-Distal,intron-Proximal3.904533.01266HepG2SF3B4
chr34869710348697132-CDS,intron-Distal4.804754.29511HepG2EIF3H
chr34869658048696641-CDS,intron-Distal3.971046.21520HepG2EIF3H
chr34868212548682150-CDS,intron-Distal,intron-Proximal4.074995.90528HepG2AQR
chr34869784148697883-CDS,intron-Distal4.551755.02066HepG2EIF3H
chr34869818848698215-CDS,intron-Distal5.286495.75302HepG2EIF3H
chr34868660448686649-CDS,intron-Distal,intron-Proximal4.384414.50440HepG2PPIG
chr34868301948683085-CDS,intron-Distal,intron-Proximal5.366158.25598HepG2PPIG
chr34869849348698516-CDS,intron-Distal5.201535.26450HepG2EIF3H
chr34868349048683614-CDS,intron-Distal,intron-Proximal3.998563.82000HepG2GRWD1
chr34868980248689874-CDS,intron-Distal,intron-Proximal3.878373.40087HepG2RBFOX2
chr34869046448690589-CDS,intron-Distal3.010135.08732HepG2PPIG
chr34869213248692228-intron-Distal4.4838311.16619HepG2HNRNPK
chr34869206048692152-intron-Distal4.061588.76119HepG2DDX59
chr34869192748691973-intron-Distal,intron-Proximal3.077813.47356HepG2HNRNPK
chr34869222848692336-intron-Distal3.449428.32850HepG2HNRNPK
chr34868450148684580-intron-Distal4.466954.35687HepG2DDX59
chr34869229248692432-intron-Distal,intron-Proximal4.740495.41525HepG2PCBP2
chr34867612448676232-intron-Distal3.166093.91530HepG2PRPF4
chr34867963848679740-intron-Distal,intron-Proximal3.096256.08046HepG2DDX59
chr34867948448679638-intron-Distal,intron-Proximal4.9941814.76067HepG2DDX59
chr34867959648679744-intron-Distal,intron-Proximal3.104387.06471HepG2HNRNPK
chr34868213848682149-intron-Distal,intron-Proximal4.752466.35567HepG2PRPF8
chr34868209848682149-intron-Distal,intron-Proximal4.888894.48002K562AQR
chr34869235748692454-intron-Distal,intron-Proximal5.013827.46068HepG2HNRNPK
chr34869190248691976-intron-Distal,intron-Proximal4.929955.92007HepG2DDX59
chr34868130448681385-intron-Distal,intron-Proximal5.195199.00303HepG2PCBP2
chr34867949448679596-intron-Distal,intron-Proximal4.6624411.39758HepG2HNRNPK
chr34868210348682138-intron-Distal,intron-Proximal3.495526.25527HepG2PRPF8
chr34868211048682124-intron-Distal,intron-Proximal3.993245.56912HepG2AQR
chr34867946048679620-intron-Distal,intron-Proximal4.306385.76537HepG2PCBP2
chr34869215248692389-intron-Distal,intron-Proximal5.2182022.46937HepG2DDX59
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CELSR3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CELSR3 is not available on ENCORE database.

  • 87 RBPs can affect the levels of CELSR3.  








The Knockdown/knockout RNA-Seq assay for CELSR3 is not available on ENCORE database.





87 RBPs can affect the gene expression of CELSR3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CELSR3ENSG00000008300.10541.15240775.22600-0.518604.766703.78870HepG2CALR
CELSR3ENSG00000008300.101959.671401240.876500.659204.701903.41720HepG2CCAR1
CELSR3ENSG00000008300.102900.032101209.848701.2611075.3089072.99040HepG2CKAP4
CELSR3ENSG00000008300.10622.384101076.41620-0.790403.722802.82910HepG2CNOT7
CELSR3ENSG00000008300.10869.99000638.129300.447003.221802.48570HepG2CPSF6
CELSR3ENSG00000008300.10302.26950462.82630-0.614604.416403.09070HepG2CSTF2
CELSR3ENSG00000008300.10573.42500754.64680-0.396202.261601.44590HepG2DDX24
CELSR3ENSG00000008300.101290.845001878.51820-0.541304.391102.78080HepG2DDX47
CELSR3ENSG00000008300.101074.00270724.650500.567502.714301.74680HepG2DDX59
CELSR3ENSG00000008300.101223.00990771.545500.664503.256302.59190HepG2DDX6
CELSR3ENSG00000008300.10732.266801157.73830-0.6609011.6293010.43900HepG2DKC1
CELSR3ENSG00000008300.10783.14480651.437000.265601.944601.34370HepG2DNAJC21
CELSR3ENSG00000008300.10549.87780865.21400-0.653903.136302.15970HepG2EEF2
CELSR3ENSG00000008300.101609.24180741.197801.1184012.5831011.37780HepG2EIF2S1
CELSR3ENSG00000008300.101260.58320797.748800.660003.196602.45990HepG2EIF4B
CELSR3ENSG00000008300.101396.741201680.53050-0.266903.200802.56170HepG2ETF1
CELSR3ENSG00000008300.10966.699001182.49390-0.290702.208601.46260HepG2EWSR1
CELSR3ENSG00000008300.101259.30800734.569400.7776010.061708.12240HepG2FASTKD2
CELSR3ENSG00000008300.10951.731101259.79500-0.404602.744401.97860HepG2FIP1L1
CELSR3ENSG00000008300.10896.55220642.092100.481503.924502.99600HepG2FUBP3
CELSR3ENSG00000008300.101672.02710766.720601.1247012.5414011.18090HepG2G3BP1
CELSR3ENSG00000008300.101343.58830723.304400.8933010.578509.38380HepG2GPKOW
CELSR3ENSG00000008300.10480.62380657.67830-0.452503.044602.36970HepG2HNRNPA1
CELSR3ENSG00000008300.101032.17980785.734800.393504.259903.39110HepG2HNRNPF
CELSR3ENSG00000008300.101288.58760777.286500.729204.063003.23040HepG2HNRNPK
CELSR3ENSG00000008300.101224.27470779.215800.651703.279402.54990HepG2IGF2BP2
CELSR3ENSG00000008300.10940.65380742.315700.341504.192103.30820HepG2ILF2
CELSR3ENSG00000008300.101333.13960831.744700.680503.040202.38200HepG2MATR3
CELSR3ENSG00000008300.101222.37670851.238700.522002.041201.49310HepG2NCBP2
CELSR3ENSG00000008300.101311.161601040.373000.333603.373902.53350HepG2NOL12
CELSR3ENSG00000008300.10880.38030612.102200.524304.145703.23510HepG2NSUN2
CELSR3ENSG00000008300.101145.24990757.632300.596002.581401.88140HepG2PABPC4
CELSR3ENSG00000008300.10931.86310742.746300.327102.854202.24110HepG2PCBP1
CELSR3ENSG00000008300.10856.81130568.280200.592304.488103.48550HepG2PRPF8
CELSR3ENSG00000008300.101075.87910755.813700.509307.178706.37820HepG2PTBP1
CELSR3ENSG00000008300.10802.944401232.56400-0.6183012.2471011.10880HepG2PUS1
CELSR3ENSG00000008300.101087.95390818.476300.410502.865702.23240HepG2QKI
CELSR3ENSG00000008300.10392.94420739.87280-0.913004.401703.52360HepG2RAVER1
CELSR3ENSG00000008300.101059.192901404.59560-0.407205.114804.46450HepG2RBM22
CELSR3ENSG00000008300.101090.80100783.445600.477406.518505.63010HepG2RECQL
CELSR3ENSG00000008300.10636.44070846.52020-0.411503.205402.47790HepG2RPLP0
CELSR3ENSG00000008300.10448.65710683.43120-0.607204.908304.11610HepG2RPS19
CELSR3ENSG00000008300.10681.299301081.80240-0.667102.682901.89480HepG2RPS3A
CELSR3ENSG00000008300.10541.53140805.45320-0.572803.072701.46320HepG2RTF1
CELSR3ENSG00000008300.10868.84470647.168400.424905.137504.30840HepG2SAFB2
CELSR3ENSG00000008300.10864.46850683.192100.339402.133701.50850HepG2SF3B1
CELSR3ENSG00000008300.101246.19090786.825000.6633012.2036011.10140HepG2SF3B4
CELSR3ENSG00000008300.101215.97820952.312000.352504.926704.03210HepG2SLBP
CELSR3ENSG00000008300.10860.64330446.789600.945702.974501.60420HepG2SNRNP200
CELSR3ENSG00000008300.101860.680201586.409100.230002.650202.15570HepG2SRFBP1
CELSR3ENSG00000008300.10663.02270821.30540-0.308902.374701.92750HepG2SRSF1
CELSR3ENSG00000008300.101385.72720980.609500.498808.416107.39960HepG2SRSF5
CELSR3ENSG00000008300.10892.13530668.201900.416905.157804.44650HepG2SRSF9
CELSR3ENSG00000008300.10808.713801377.32650-0.7682018.2557017.18480HepG2SSB
CELSR3ENSG00000008300.101422.26820841.094900.757806.787304.96280HepG2STAU1
CELSR3ENSG00000008300.101137.919701551.20710-0.447002.874901.52040HepG2SUGP2
CELSR3ENSG00000008300.10692.93180850.33240-0.295302.366001.49150HepG2SUPT6H
CELSR3ENSG00000008300.10842.60770672.970200.324201.934501.31360HepG2TARDBP
CELSR3ENSG00000008300.10982.779601505.27580-0.615102.718101.65970HepG2TBRG4
CELSR3ENSG00000008300.101056.58080678.312800.639305.394804.23910HepG2TIA1
CELSR3ENSG00000008300.101038.80870712.455600.544008.455207.55480HepG2TRIM56
CELSR3ENSG00000008300.101504.08650519.128701.534606.477104.88930HepG2U2AF2
CELSR3ENSG00000008300.101808.676901323.033500.451008.226107.28200HepG2UTP3
CELSR3ENSG00000008300.10625.80120819.19920-0.388503.908603.13350HepG2ZC3H8
CELSR3ENSG00000008300.10160.09710267.04320-0.738104.527403.83340K562AGGF1
CELSR3ENSG00000008300.10199.09430135.151000.558802.508201.59640K562BCLAF1
CELSR3ENSG00000008300.10186.44880120.115500.634302.670201.64140K562CCAR1
CELSR3ENSG00000008300.10335.66500240.547000.480602.743901.64330K562CPEB4
CELSR3ENSG00000008300.10104.42280167.40590-0.680903.125501.71330K562DDX6
CELSR3ENSG00000008300.10208.13720114.093400.867203.084802.11800K562EFTUD2
CELSR3ENSG00000008300.10259.20120172.506000.587302.078901.36300K562EIF4A3
CELSR3ENSG00000008300.10399.40440272.523400.551402.429301.54560K562EIF4G2
CELSR3ENSG00000008300.1037.1697077.33840-1.057102.760602.05450K562G3BP2
CELSR3ENSG00000008300.10222.95670114.394000.962703.923102.18920K562GEMIN5
CELSR3ENSG00000008300.10161.91550105.250100.621302.207501.49640K562GPKOW
CELSR3ENSG00000008300.10192.07940122.260400.651602.597902.01670K562HNRNPC
CELSR3ENSG00000008300.10151.31190224.94910-0.572102.671801.63710K562HNRNPL
CELSR3ENSG00000008300.10303.77320194.844900.640604.278103.15840K562HNRNPU
CELSR3ENSG00000008300.1091.62330154.86470-0.757202.875202.06460K562HSPD1
CELSR3ENSG00000008300.10161.5514089.905500.845402.917301.95550K562KRR1
CELSR3ENSG00000008300.10219.95920138.214100.670203.513702.56070K562MAGOH
CELSR3ENSG00000008300.10179.50830102.741500.804903.516002.52250K562METAP2
CELSR3ENSG00000008300.10568.45040297.321100.934904.715303.65360K562PUF60
CELSR3ENSG00000008300.10139.86840275.56750-0.978306.166205.39430K562PUS1
CELSR3ENSG00000008300.10233.19250135.443700.783704.346602.94250K562NELFE
CELSR3ENSG00000008300.1070.06500127.68040-0.865803.040101.90560K562SAFB
CELSR3ENSG00000008300.10264.34550159.139900.732002.880001.32800K562SBDS
CELSR3ENSG00000008300.10127.7336080.413500.667502.482901.67430K562SF3B4
CELSR3ENSG00000008300.10333.16040176.611500.915503.402601.90050K562SFPQ
CELSR3ENSG00000008300.10378.32850246.831900.616004.905503.70400K562SRPK2
CELSR3ENSG00000008300.10213.71680137.080200.640602.662901.44190K562STAU1
CELSR3ENSG00000008300.10181.40520107.402200.756102.737401.72580K562SUPV3L1
CELSR3ENSG00000008300.1082.16320143.72140-0.806703.339002.43750K562SYNCRIP
CELSR3ENSG00000008300.10274.58290133.222701.043307.585006.34740K562TARDBP
CELSR3ENSG00000008300.10230.42630128.518200.842204.997503.84690K562TIA1
CELSR3ENSG00000008300.10261.91130112.050701.224809.076107.14340K562TRIM56
CELSR3ENSG00000008300.10251.29300169.106600.571302.633901.46390K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CELSR3 is not available on ENCORE database.





6 RBPs can affect the splicing of CELSR3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RICELSR3ENSG00000008300.10chr3-4867928348679900486792834867944248679790486799000.584000.000340.01063includedHepG2SRSF1
RICELSR3ENSG00000008300.10chr3-4867928348679900486792834867944248679790486799000.458000.000050.00101includedHepG2QKI
RICELSR3ENSG00000008300.10chr3-4867928348679900486792834867944248679790486799000.476000.000100.00184includedHepG2TAF15
RICELSR3ENSG00000008300.10chr3-4867928348679900486792834867944248679790486799000.383000.001270.01722includedHepG2NCBP2
RICELSR3ENSG00000008300.10chr3-4867928348679900486792834867944248679790486799000.300000.002150.02525includedHepG2HNRNPK
RICELSR3ENSG00000008300.10chr3-486792834867990048679283486794424867979048679900-0.442000.000100.01968excludedHepG2RBFOX2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CELSR3 is not avaliable on ENCORE database.