PEX6

General Information

Gene Name       : PEX6
Gene ID             : ENSG00000124587.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PEX6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PEX6ENSG00000124587.131.984.123.05ENCSR000AEF
HepG2PEX6ENSG00000124587.133.451.832.64ENCSR985KAT
K562PEX6ENSG00000124587.136.957.137.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PEX6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PEX6 RNA is bound by 8 proteins.  







eCLIP assay for PEX6 is not avaliable on ENCORE database.





8 proteins are bound to PEX6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr64293252942932572-3'-UTR,CDS,intron-Distal4.398694.67689HepG2PPIG
chr64293282042932870-3'-UTR,CDS,intron-Distal3.636163.14867K562DDX55
chr64293341842933476-3'-UTR,CDS,intron-Distal,intron-Proximal3.466166.13978HepG2PPIG
chr64293335642933424-3'-UTR,CDS,intron-Distal,intron-Proximal4.699634.65563K562AQR
chr64293257242932662-3'-UTR,CDS,intron-Distal3.662394.77567K562DDX55
chr64294684042946918-5'-UTR,CDS,intron-Distal,intron-Proximal3.343933.52645HepG2NCBP2
chr64294174642941792-CDS,intron-Distal4.6803512.96493K562LIN28B
chr64293770342937726-CDS,intron-Distal,intron-Proximal4.912146.51488K562LIN28B
chr64294173742941746-CDS,intron-Distal,intron-Proximal4.268019.24303K562LIN28B
chr64293740342937457-CDS,intron-Distal,intron-Proximal4.884415.27053HepG2PPIG
chr64294478242944886-intron-Distal3.140036.24581HepG2U2AF2
chr64293267442932739-intron-Distal,intron-Proximal4.919425.90023K562SF3B4
chr64293268442932769-intron-Distal,intron-Proximal4.525415.30668HepG2RBFOX2
chr64293267542932753-intron-Distal,intron-Proximal3.400425.85035HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PEX6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PEX6 is not available on ENCORE database.

  • 111 RBPs can affect the levels of PEX6.  








The Knockdown/knockout RNA-Seq assay for PEX6 is not available on ENCORE database.





111 RBPs can affect the gene expression of PEX6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PEX6ENSG00000124587.9109.94230287.96840-1.3892015.4384014.24830HepG2ACO1
PEX6ENSG00000124587.9263.55450795.45780-1.593705.654004.92540HepG2AKAP1
PEX6ENSG00000124587.9197.82490289.31900-0.548403.396802.55820HepG2AKAP8L
PEX6ENSG00000124587.9257.81170137.397800.907904.376503.27000HepG2BCLAF1
PEX6ENSG00000124587.9294.0322081.490801.8512018.4453017.10120HepG2BOP1
PEX6ENSG00000124587.9102.30290155.51340-0.604202.067901.39460HepG2CALR
PEX6ENSG00000124587.9381.58810287.903000.406302.733802.07170HepG2CKAP4
PEX6ENSG00000124587.9315.0460074.810402.0742022.1752020.46730HepG2CPSF6
PEX6ENSG00000124587.9184.3510097.660500.916502.519001.48930HepG2CSTF2
PEX6ENSG00000124587.9178.04460252.06300-0.501502.599401.97430HepG2CELF1
PEX6ENSG00000124587.9502.43610271.042900.890309.490608.24500HepG2DAZAP1
PEX6ENSG00000124587.973.61190155.49660-1.078904.491803.53100HepG2DDX55
PEX6ENSG00000124587.9196.33700128.048000.616502.708201.73410HepG2DHX30
PEX6ENSG00000124587.9186.28530132.752800.488701.984301.37810HepG2DNAJC21
PEX6ENSG00000124587.9235.80360131.614600.841206.268005.34340HepG2DNAJC2
PEX6ENSG00000124587.993.42610177.24850-0.923904.492203.01640HepG2EIF2S2
PEX6ENSG00000124587.992.74700167.46030-0.852403.499002.48950HepG2EIF3D
PEX6ENSG00000124587.9251.37820677.07790-1.429504.741403.85600HepG2EIF4B
PEX6ENSG00000124587.9372.52170256.143600.540302.914702.07990HepG2EIF4G2
PEX6ENSG00000124587.9189.21860281.39410-0.572503.165402.27490HepG2EWSR1
PEX6ENSG00000124587.9195.5861074.943901.383803.101502.02370HepG2FTO
PEX6ENSG00000124587.9302.40490701.83800-1.214703.921603.10730HepG2FXR1
PEX6ENSG00000124587.983.99960149.09830-0.827803.077102.12880HepG2GEMIN5
PEX6ENSG00000124587.9119.88820204.16430-0.768002.939601.88860HepG2GNB2L1
PEX6ENSG00000124587.9182.02460249.08980-0.452502.179801.33990HepG2HNRNPA2B1
PEX6ENSG00000124587.9251.71550102.827001.2915010.942709.64110HepG2HNRNPF
PEX6ENSG00000124587.9366.86100246.903300.571204.437403.59940HepG2HNRNPL
PEX6ENSG00000124587.9146.0780080.923500.852003.032002.37720HepG2HNRNPLL
PEX6ENSG00000124587.9398.89010148.102801.4293016.4500015.06850HepG2HNRNPU
PEX6ENSG00000124587.9334.72200101.254501.7249020.9839019.20520HepG2IGF2BP1
PEX6ENSG00000124587.9209.85640661.36930-1.656106.127705.16020HepG2IGF2BP2
PEX6ENSG00000124587.9215.82410621.10150-1.525004.674303.40490HepG2IGF2BP3
PEX6ENSG00000124587.9158.78920247.76910-0.641902.622801.81470HepG2LARP4
PEX6ENSG00000124587.9417.25820702.08560-0.750702.259801.66470HepG2MAGOH
PEX6ENSG00000124587.9179.20450705.92120-1.977907.411906.41760HepG2MATR3
PEX6ENSG00000124587.958.77620175.25400-1.576106.045404.53880HepG2METAP2
PEX6ENSG00000124587.9151.8464082.546600.879202.691401.73760HepG2MTPAP
PEX6ENSG00000124587.9437.98950722.47330-0.722002.063701.51260HepG2NCBP2
PEX6ENSG00000124587.976.29710142.82980-0.904602.996701.85470HepG2NONO
PEX6ENSG00000124587.9234.1947071.759201.7064012.7028011.21560HepG2NSUN2
PEX6ENSG00000124587.9233.75300391.48440-0.744003.456702.45670HepG2PABPC1
PEX6ENSG00000124587.9405.33450643.05900-0.665802.042101.41380HepG2PABPC4
PEX6ENSG00000124587.9224.82520654.83210-1.5423033.6978031.98410HepG2PCBP1
PEX6ENSG00000124587.9202.60560132.093900.617003.104102.32720HepG2PPIL4
PEX6ENSG00000124587.9166.48890666.28440-2.0007047.8898046.21830HepG2PTBP1
PEX6ENSG00000124587.9199.62470272.14480-0.447102.078501.49230HepG2PUM2
PEX6ENSG00000124587.9402.34310721.67000-0.8429011.3094010.17300HepG2QKI
PEX6ENSG00000124587.957.22240183.60400-1.681904.921303.99570HepG2RAVER1
PEX6ENSG00000124587.9180.48190258.07240-0.515902.621101.78440HepG2RBM15
PEX6ENSG00000124587.9150.47190365.03030-1.278507.046806.30940HepG2RBM22
PEX6ENSG00000124587.9272.39370654.93640-1.2657019.3890017.70730HepG2RBM25
PEX6ENSG00000124587.9283.93810741.53690-1.3849027.6498026.30600HepG2NELFE
PEX6ENSG00000124587.9531.12920690.59320-0.378803.338302.66910HepG2RECQL
PEX6ENSG00000124587.9256.19190110.780401.209404.865603.99330HepG2RPLP0
PEX6ENSG00000124587.9285.43320180.543600.660702.169101.33050HepG2RPS10
PEX6ENSG00000124587.982.96680162.95830-0.973904.720203.94070HepG2RPS19
PEX6ENSG00000124587.9133.66250227.12630-0.764904.082602.76520HepG2RPS5
PEX6ENSG00000124587.965.79750118.60810-0.850102.611001.84520HepG2RRP9
PEX6ENSG00000124587.970.43610163.53490-1.215206.284104.88220HepG2SERBP1
PEX6ENSG00000124587.9129.79590272.28910-1.068906.605505.53550HepG2SF3A3
PEX6ENSG00000124587.9368.83440693.74490-0.9114014.0706012.89710HepG2SF3B4
PEX6ENSG00000124587.9465.96010245.988200.921506.890105.86420HepG2SLBP
PEX6ENSG00000124587.9335.37180179.324800.903103.471601.68130HepG2SLTM
PEX6ENSG00000124587.9107.32100153.78950-0.519001.955201.39930HepG2SMN1
PEX6ENSG00000124587.9315.57410187.760400.749003.876002.72550HepG2SMNDC1
PEX6ENSG00000124587.9209.09390412.26340-0.979405.186504.56000HepG2SRFBP1
PEX6ENSG00000124587.9141.48500724.09630-2.3555064.7819063.18200HepG2SRSF1
PEX6ENSG00000124587.9129.74300253.30640-0.965207.108706.16900HepG2SRSF5
PEX6ENSG00000124587.9211.53320101.026601.066007.273806.22920HepG2SRSF7
PEX6ENSG00000124587.9162.17600589.07090-1.8609042.6141040.95540HepG2SRSF9
PEX6ENSG00000124587.9295.48680650.78170-1.1391018.5408017.27580HepG2TAF15
PEX6ENSG00000124587.9382.74590598.04790-0.643905.418004.25970HepG2TIA1
PEX6ENSG00000124587.9241.68950143.867200.748304.394503.79430HepG2TIAL1
PEX6ENSG00000124587.9239.03770145.198700.719104.773504.07360HepG2TRIM56
PEX6ENSG00000124587.983.58300201.83720-1.271907.126606.12680HepG2U2AF1
PEX6ENSG00000124587.9311.68630241.478500.368101.983101.37580HepG2UPF1
PEX6ENSG00000124587.9246.39020141.696700.798002.889601.86360HepG2UPF2
PEX6ENSG00000124587.9164.86120233.13840-0.499902.290301.73430HepG2UTP3
PEX6ENSG00000124587.962.32440180.72660-1.535904.213802.64950HepG2XRCC5
PEX6ENSG00000124587.962.18920202.01630-1.699704.797303.42130HepG2XRCC6
PEX6ENSG00000124587.9307.73020152.365401.014005.748904.71690HepG2XRN2
PEX6ENSG00000124587.9362.83380153.625101.2398015.0472013.68460HepG2ZC3H8
PEX6ENSG00000124587.9185.64900265.58050-0.516603.078302.51040HepG2ZNF622
PEX6ENSG00000124587.9271.96500407.69410-0.584103.671302.29380K562AARS
PEX6ENSG00000124587.9482.40250879.89150-0.8671015.1456013.92760K562AGGF1
PEX6ENSG00000124587.9718.74120915.55690-0.349202.496601.87560K562AKAP8L
PEX6ENSG00000124587.91248.30690978.085100.351802.479401.91760K562AQR
PEX6ENSG00000124587.9969.25800618.348000.648408.775107.03420K562BCLAF1
PEX6ENSG00000124587.9520.77450263.315000.983809.149907.51390K562BOP1
PEX6ENSG00000124587.9692.02410468.246400.563502.636601.39020K562CIRBP
PEX6ENSG00000124587.91241.73280792.231800.648302.879401.78960K562CNOT7
PEX6ENSG00000124587.9972.42790682.126000.511506.473604.74280K562CPEB4
PEX6ENSG00000124587.9624.99850279.965701.1585016.0672014.13900K562CPSF6
PEX6ENSG00000124587.9702.25860469.109200.582004.773903.33130K562CSTF2
PEX6ENSG00000124587.91163.08750811.224800.519707.263605.27510K562DDX21
PEX6ENSG00000124587.9794.41090985.26780-0.310602.895901.99820K562DKC1
PEX6ENSG00000124587.9816.91150624.286000.387903.735702.31020K562EIF2S1
PEX6ENSG00000124587.9777.28810593.840600.388302.550101.76310K562EIF4A3
PEX6ENSG00000124587.9415.37230534.75320-0.364502.664001.53930K562EIF4B
PEX6ENSG00000124587.9760.85250428.460500.828409.608707.92050K562FIP1L1
PEX6ENSG00000124587.9250.69470387.44580-0.628102.889801.73610K562FKBP4
PEX6ENSG00000124587.9426.30730241.477300.819906.226504.80040K562FTO
PEX6ENSG00000124587.989.75090217.78290-1.278907.514806.23060K562G3BP2
PEX6ENSG00000124587.9416.99270267.287300.641502.100901.40510K562GPKOW
PEX6ENSG00000124587.91289.216501016.834600.342302.580401.84850K562GRSF1
PEX6ENSG00000124587.9876.16590637.750800.458103.913102.62780K562HNRNPL
PEX6ENSG00000124587.91943.25710963.154601.0125024.4643022.01400K562HNRNPU
PEX6ENSG00000124587.9787.74790580.847500.439503.226802.37050K562HSPD1
PEX6ENSG00000124587.9777.33010971.66990-0.321902.554901.76660K562KIF1C
PEX6ENSG00000124587.9863.396401088.51080-0.334302.459201.61010K562MBNL1
PEX6ENSG00000124587.9432.00180260.906900.727405.592404.32080K562METAP2
PEX6ENSG00000124587.9443.62320762.96420-0.782305.911104.44560K562NAA15
PEX6ENSG00000124587.91168.28100767.633100.6058012.4789011.05320K562NSUN2
PEX6ENSG00000124587.9733.60110486.442900.592605.286504.09320K562PPIG
PEX6ENSG00000124587.9335.16420518.10400-0.628403.705402.83690K562PRPF8
PEX6ENSG00000124587.9827.584701156.03010-0.482204.525203.48690K562PUF60
PEX6ENSG00000124587.9570.53030908.05320-0.670506.275505.49680K562PUS1
PEX6ENSG00000124587.9585.95610884.70140-0.594407.169306.24560K562RBM15
PEX6ENSG00000124587.9646.01280776.05020-0.264602.165001.32770K562SRPK2
PEX6ENSG00000124587.9830.00140501.378200.727102.766601.75100K562SUPV3L1
PEX6ENSG00000124587.9405.93490615.98160-0.601605.789704.59510K562SYNCRIP
PEX6ENSG00000124587.9769.64150442.591500.798104.500603.59340K562TARDBP
PEX6ENSG00000124587.9702.75150426.961500.718804.907803.77190K562TIA1
PEX6ENSG00000124587.9555.75550384.527500.531303.339802.30630K562TIAL1
PEX6ENSG00000124587.9628.56890408.657100.621103.683602.56200K562TRIM56
PEX6ENSG00000124587.9111.45930211.19190-0.922004.627603.13920K562U2AF1
PEX6ENSG00000124587.9143.19790218.08600-0.606902.968402.13630K562U2AF2
PEX6ENSG00000124587.91164.31760813.938600.516408.171607.01720K562UPF1
PEX6ENSG00000124587.9292.54070520.58760-0.831504.138002.11530K562XRCC6
PEX6ENSG00000124587.9775.79030540.682800.520803.686102.22060K562XRN2
PEX6ENSG00000124587.91347.856101101.793800.290702.139201.39100K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PEX6 is not available on ENCORE database.





6 RBPs can affect the splicing of PEX6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPEX6ENSG00000124587.9chr6-4294174042941824429376224293772542942612429427760.176000.000200.02930includedK562FMR1
SEPEX6ENSG00000124587.9chr6-4294174042941843429376224293772542942612429427760.107000.006350.05662includedK562AQR
SEPEX6ENSG00000124587.9chr6-429366114293672342936027429362364293740542937539-0.167000.002610.08567excludedHepG2MATR3
SEPEX6ENSG00000124587.9chr6-4294174042941824429376224293772542942612429427760.189000.001410.05285includedK562SF3B1
SEPEX6ENSG00000124587.9chr6-429366114293672342936027429362364293740542937539-0.243000.001170.02201excludedK562HNRNPC
A3SSPEX6ENSG00000124587.9chr6-4294174042941843429417404294182442942612429427760.180000.003550.09956longerK562U2AF2
A3SSPEX6ENSG00000124587.9chr6-4294174042941843429417404294182442942612429427760.152000.000100.00085longerK562AQR
A3SSPEX6ENSG00000124587.9chr6-4293298942933135429329894293310642933418429335270.057000.001900.01229longerK562AQR
A3SSPEX6ENSG00000124587.9chr6-4293510542935322429351054293530142936027429362360.096000.004300.02533longerK562AQR
A3SSPEX6ENSG00000124587.9chr6-4293341842933664429334184293352742933781429338430.171000.000000.00004longerK562AQR
MXEPEX6ENSG00000124587.9chr6-42937622429377254294174042941843429374054293753942942612429427760.163000.002910.022791includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PEX6 is not avaliable on ENCORE database.