BMI1

General Information

Gene Name       : BMI1
Gene ID             : ENSG00000168283.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BMI1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BMI1ENSG00000168283.1324.5921.8323.21ENCSR000AEF
HepG2BMI1ENSG00000168283.1328.1434.5931.37ENCSR985KAT
K562BMI1ENSG00000168283.1346.4056.6351.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
BMI1Ribo-STAMP-293TshRNABMI1-BGRSLV02-27,BMI1-BGRSLV02-28NT-BGRSLV02-1,NT-BGRSLV02-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BMI1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BMI1 RNA is bound by 19 proteins.  







eCLIP assay for BMI1 is not avaliable on ENCORE database.





19 proteins are bound to BMI1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr102261891422619008+3'-UTR5.0980321.84350K562PUM2
chr102261870822618802+3'-UTR4.543625.29045K562IGF2BP1
chr102261884322618906+3'-UTR3.025563.17750K562YBX3
chr102261888422618958+3'-UTR4.324313.98716K562IGF2BP1
chr102261916522619239+3'-UTR3.9066010.72087K562PUM2
chr102261934822619408+3'-UTR3.674798.96355K562FAM120A
chr102261922022619290+3'-UTR3.825945.48255K562ZC3H11A
chr102261531122615374+3'-UTR,5'-UTR,CDS,intron-Proximal5.283457.81477K562SF3B4
chr102261036122610481+5'-UTR,intron-Distal4.9797413.86840HepG2DDX3X
chr102261032122610438+5'-UTR,intron-Distal3.577067.10368K562GEMIN5
chr102261036422610500+5'-UTR,intron-Distal3.332428.73667K562FTO
chr102261037122610484+5'-UTR,intron-Distal3.409845.12958K562UCHL5
chr102261835822618457+CDS4.982198.37653K562IGF2BP1
chr102261703122617107+3'-UTR,CDS,intron-Proximal5.202599.04180K562SF3B4
chr102261803522618057+CDS3.630114.09885HepG2BCLAF1
chr102261703522617110+3'-UTR,CDS,intron-Proximal4.4167111.41040K562EFTUD2
chr102261655322616608+3'-UTR,CDS,intron-Distal,intron-Proximal3.953183.02181K562PRPF8
chr102261819722618236+CDS4.242843.86978K562YBX3
chr102261540222615468+3'-UTR,CDS3.860483.86058K562GRWD1
chr102261813522618183+CDS,intron-Proximal3.788114.23459K562PRPF8
chr102261542622615522+3'-UTR,CDS,intron-Proximal3.083555.35431HepG2BCLAF1
chr102261683522616920+3'-UTR,CDS,intron-Distal,intron-Proximal4.1129311.83444K562SF3B4
chr102261813822618264+CDS,intron-Proximal4.4243710.24470HepG2BCLAF1
chr102261122722611283+intron-Distal4.061933.38470HepG2NKRF
chr102261567022615703+intron-Distal3.639225.17040K562KHSRP
chr102261564722615670+intron-Distal5.6482510.72437K562KHSRP
chr102261158722611653+intron-Distal4.148565.39628K562PTBP1
chr102261154122611638+intron-Distal3.868883.03891HepG2PTBP1
chr102261110722611175+intron-Distal,intron-Proximal4.255374.72743K562NONO
chr102261558222615647+intron-Distal,intron-Proximal5.278047.58902K562KHSRP
chr102261467122614729+intron-Distal,intron-Proximal3.902753.57432K562NONO
chr102261238122612457+intron-Distal4.868884.38664K562QKI
chr102261527722615330+intron-Proximal3.066695.17040K562KHSRP
chr102261572922615777+intron-Proximal3.899074.93120K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BMI1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BMI1 is not available on ENCORE database.

  • 80 RBPs can affect the levels of BMI1.  








The Knockdown/knockout RNA-Seq assay for BMI1 is not available on ENCORE database.





80 RBPs can affect the gene expression of BMI1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BMI1ENSG00000168283.9615.87240903.07710-0.552204.281003.07000HepG2ADAR
BMI1ENSG00000168283.91226.080401539.01940-0.328001.840401.39690HepG2AKAP1
BMI1ENSG00000168283.9794.519101022.19020-0.363504.020903.10800HepG2AKAP8L
BMI1ENSG00000168283.9579.63040943.61200-0.703105.133303.85530HepG2BCCIP
BMI1ENSG00000168283.91078.999101527.72970-0.501703.410702.31730HepG2CCAR1
BMI1ENSG00000168283.9762.892301145.69360-0.586703.245302.50710HepG2CPSF6
BMI1ENSG00000168283.9950.583001256.47170-0.402503.126202.45060HepG2CELF1
BMI1ENSG00000168283.91013.69540724.787200.483904.662403.46570HepG2DDX24
BMI1ENSG00000168283.9627.17610927.72520-0.564803.484902.62960HepG2DDX55
BMI1ENSG00000168283.91143.44610973.413700.232202.001501.41080HepG2DKC1
BMI1ENSG00000168283.9580.22490909.42370-0.648305.295504.34970HepG2DNAJC21
BMI1ENSG00000168283.9630.18720901.23590-0.516104.080803.31990HepG2DNAJC2
BMI1ENSG00000168283.91707.923201332.897600.357602.965602.10440HepG2EIF4G1
BMI1ENSG00000168283.91828.624401276.877400.518002.497401.72200HepG2EIF4G2
BMI1ENSG00000168283.92210.383301606.800600.460008.703807.73970HepG2ETF1
BMI1ENSG00000168283.91051.089301357.46100-0.369002.608201.93690HepG2FXR1
BMI1ENSG00000168283.9378.06700540.31840-0.515203.353302.35660HepG2GEMIN5
BMI1ENSG00000168283.9800.51060955.87780-0.255902.045301.42180HepG2HNRNPF
BMI1ENSG00000168283.9968.007001275.08090-0.397503.101002.36290HepG2HNRNPK
BMI1ENSG00000168283.91002.017101231.03920-0.297002.058601.46650HepG2HNRNPL
BMI1ENSG00000168283.9945.712601239.50680-0.390301.875401.34770HepG2HNRNPLL
BMI1ENSG00000168283.9818.144801014.45500-0.310302.040601.51050HepG2HNRNPU
BMI1ENSG00000168283.9878.597101280.01270-0.542904.711003.85060HepG2IGF2BP2
BMI1ENSG00000168283.9751.037701043.50070-0.474502.568201.30720HepG2ILF3
BMI1ENSG00000168283.9783.58440930.04750-0.247202.322401.38730HepG2KIF1C
BMI1ENSG00000168283.9608.44000978.23410-0.685103.853502.79280HepG2PABPC1
BMI1ENSG00000168283.9794.986201244.76640-0.646906.312505.23340HepG2PABPC4
BMI1ENSG00000168283.91032.418201218.85760-0.239502.315501.75010HepG2PCBP1
BMI1ENSG00000168283.91289.20630936.688600.460702.479601.49590HepG2PCBP2
BMI1ENSG00000168283.9696.31370904.82190-0.377902.720401.98890HepG2PPIL4
BMI1ENSG00000168283.9927.67140715.890000.373802.650901.85940HepG2PRPF8
BMI1ENSG00000168283.92093.11770904.102501.2110011.4520010.09120HepG2RAVER1
BMI1ENSG00000168283.91984.808401343.004500.5634010.419709.55760HepG2RBM22
BMI1ENSG00000168283.91030.31650708.185500.540804.386703.42250HepG2RRP9
BMI1ENSG00000168283.9523.92580903.44780-0.786107.185906.21760HepG2SAFB2
BMI1ENSG00000168283.91550.510701184.315400.388602.064301.48050HepG2SF3A3
BMI1ENSG00000168283.9762.715401226.93500-0.685804.259003.40140HepG2SF3B1
BMI1ENSG00000168283.9984.438501226.17290-0.316802.824402.11560HepG2SLBP
BMI1ENSG00000168283.9781.542601053.62470-0.431002.985502.32070HepG2SMN1
BMI1ENSG00000168283.92020.887901516.903400.413807.655306.93670HepG2SRFBP1
BMI1ENSG00000168283.9877.387701262.72190-0.525306.714805.79650HepG2SRSF5
BMI1ENSG00000168283.91719.194001317.082400.384306.312205.59470HepG2SSB
BMI1ENSG00000168283.9770.92910985.92850-0.354902.252001.79140HepG2TIAL1
BMI1ENSG00000168283.9531.84260994.53160-0.903009.475908.52730HepG2TRIM56
BMI1ENSG00000168283.92037.685401000.800501.0257011.9901010.65330HepG2U2AF1
BMI1ENSG00000168283.91018.536701322.34520-0.376602.598001.78780HepG2UBE2L3
BMI1ENSG00000168283.9893.667201050.30370-0.233002.057401.43970HepG2UPF1
BMI1ENSG00000168283.9534.79960845.90800-0.661503.484002.35020HepG2UPF2
BMI1ENSG00000168283.9807.006901079.58790-0.419805.061903.68670HepG2UTP18
BMI1ENSG00000168283.9772.645801014.03160-0.392204.436303.70650HepG2UTP3
BMI1ENSG00000168283.9502.84590909.18230-0.854508.258107.02210HepG2XRN2
BMI1ENSG00000168283.9845.992201155.13730-0.449307.406806.62380HepG2ZNF622
BMI1ENSG00000168283.91869.646201458.207700.358503.261001.96520K562AARS
BMI1ENSG00000168283.93112.093302440.972600.350306.398405.58800K562AGGF1
BMI1ENSG00000168283.91527.458101818.17290-0.251402.976801.98250K562BCLAF1
BMI1ENSG00000168283.91981.698102598.00040-0.390702.906601.42340K562CKAP4
BMI1ENSG00000168283.91951.282702532.14370-0.375904.407003.41920K562CPSF6
BMI1ENSG00000168283.91127.329101379.35510-0.291102.690201.64780K562CSTF2
BMI1ENSG00000168283.95199.526302987.888800.7992031.7739029.81380K562DDX47
BMI1ENSG00000168283.93285.687202733.167100.265503.441302.45010K562DKC1
BMI1ENSG00000168283.92431.107601694.451200.520704.910203.86510K562EIF3G
BMI1ENSG00000168283.91204.253901456.75380-0.274602.491501.41570K562EIF4B
BMI1ENSG00000168283.95806.267503946.128800.557107.318805.80370K562EIF4G2
BMI1ENSG00000168283.91971.833901385.187400.509404.799103.24480K562FKBP4
BMI1ENSG00000168283.92541.309401682.225700.5951013.3614012.13260K562FXR1
BMI1ENSG00000168283.92509.925901789.515100.488003.517502.69990K562G3BP2
BMI1ENSG00000168283.9868.143901660.78480-0.935906.803804.58380K562GEMIN5
BMI1ENSG00000168283.95529.562903767.165500.553606.717105.48770K562HSPD1
BMI1ENSG00000168283.91622.702502135.24700-0.396002.708101.69510K562IGF2BP2
BMI1ENSG00000168283.93357.767102695.517200.316802.873702.03040K562KIF1C
BMI1ENSG00000168283.91195.687601571.02000-0.393902.865301.41120K562NUSAP1
BMI1ENSG00000168283.92462.884201612.027700.611406.010404.90370K562PRPF8
BMI1ENSG00000168283.9942.359001430.66480-0.602307.321905.72110K562PSIP1
BMI1ENSG00000168283.95533.630704305.730000.361903.462702.55320K562PUF60
BMI1ENSG00000168283.96007.405404578.361600.391803.076401.95020K562PUM1
BMI1ENSG00000168283.93659.644102518.934600.538806.777805.97100K562PUS1
BMI1ENSG00000168283.93222.386002454.314200.392706.098305.24370K562RBM15
BMI1ENSG00000168283.91626.706102091.96240-0.362902.577901.76840K562RBM22
BMI1ENSG00000168283.9930.540101305.24490-0.488205.190503.82640K562RCC2
BMI1ENSG00000168283.92269.993901642.331100.466803.886102.91630K562RPS19
BMI1ENSG00000168283.91751.574101198.138900.547806.932405.23110K562SAFB
BMI1ENSG00000168283.91760.617601238.740400.507105.283803.27950K562SDAD1
BMI1ENSG00000168283.91060.098601382.04900-0.382603.481502.28170K562SRSF4
BMI1ENSG00000168283.91510.253801778.05950-0.235502.392801.30810K562SRSF7
BMI1ENSG00000168283.92360.275601348.750900.8072017.7900015.74740K562SYNCRIP
BMI1ENSG00000168283.91736.336802087.50060-0.265701.989601.30280K562TIA1
BMI1ENSG00000168283.91647.560002047.90220-0.313802.481801.46010K562TRA2A
BMI1ENSG00000168283.9990.266601461.83540-0.561906.149304.61160K562TRIM56
BMI1ENSG00000168283.92452.800101791.906500.452806.478905.25630K562U2AF2
BMI1ENSG00000168283.92921.901902084.887000.486802.946102.07280K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BMI1 is not available on ENCORE database.





18 RBPs can affect the splicing of BMI1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBMI1ENSG00000168283.9chr10+2261494922615005226101392261062522615359226157600.081000.000010.00022includedK562AQR
SEBMI1ENSG00000168283.9chr10+226170622261710822616810226169872261752822617627-0.086000.000000.00000excludedK562AQR
SEBMI1ENSG00000168283.9chr10+226179762261805722617393226176272261814122620413-0.073000.000000.00000excludedK562AQR
SEBMI1ENSG00000168283.9chr10+226168782261698722615818226159152261706222617108-0.086000.000230.00856excludedK562AGGF1
SEBMI1ENSG00000168283.9chr10+2261494922615005226145982261465122615359226157600.491000.001090.09478includedK562CPSF6
SEBMI1ENSG00000168283.9chr10+2261494922615005226145982261465122615359226157600.440000.002540.08185includedK562SF3B1
A5SSBMI1ENSG00000168283.9chr10+226153592261591522615359226154902261652322616579-0.093000.000210.01590shorterK562U2AF2
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.283000.000000.00000includedK562PUS1
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.077000.000010.00020includedHepG2U2AF2
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.061000.000030.00680includedK562SMNDC1
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.076000.003040.06293includedHepG2UCHL5
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.064000.002960.03575includedHepG2PRPF8
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.135000.000000.00000includedK562AGGF1
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.073000.000020.00048includedHepG2QKI
RIBMI1ENSG00000168283.9chr10+226164772261672022616477226165792261667022616720-0.087000.004050.06993excludedK562RBM22
RIBMI1ENSG00000168283.9chr10+2261649922616721226164992261657922616670226167210.332000.000000.00000includedK562AKAP8L
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.173000.000000.00000includedK562AKAP8L
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.116000.000000.00000includedK562RBM15
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.167000.000000.00000includedK562U2AF1
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.131000.000000.00000includedK562U2AF2
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.086000.000000.00002includedHepG2NCBP2
RIBMI1ENSG00000168283.9chr10+2261535922615915226153592261549022615818226159150.148000.000000.00000includedK562UTP18
RIBMI1ENSG00000168283.9chr10+226153592261591522615359226154902261581822615915-0.070000.000000.00000excludedK562FXR1
MXEBMI1ENSG00000168283.9chr10+22616878226169872261706222617108226158182261591522617528226176270.111000.000000.000001includedK562AQR
MXEBMI1ENSG00000168283.9chr10+22616499226165792261667022616721226153592261591522616878226169870.164000.000000.000001includedK562AQR
MXEBMI1ENSG00000168283.9chr10+22615818226159152261687822616987226153592261549022617062226171080.129000.004600.060051includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BMI1 is not avaliable on ENCORE database.