LINC00910

General Information

Gene Name       : LINC00910
Gene ID             : ENSG00000188825.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LINC00910)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LINC00910ENSG00000188825.131.262.181.72ENCSR000AEF
HepG2LINC00910ENSG00000188825.130.060.020.04ENCSR985KAT
K562LINC00910ENSG00000188825.130.781.000.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LINC00910 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LINC00910 RNA is bound by 31 proteins.  







eCLIP assay for LINC00910 is not avaliable on ENCORE database.





31 proteins are bound to LINC00910 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174146627041466356-intron-Distal3.425119.77661K562RBFOX2
chr174146470641464715-intron-Distal5.2357028.37017HepG2SMNDC1
chr174146636341466402-intron-Distal4.3955014.04446K562YWHAG
chr174146470241464760-intron-Distal4.711947.26476HepG2AQR
chr174146376141463837-intron-Distal3.276458.13835K562TAF15
chr174146628141466340-intron-Distal3.657148.83666K562NONO
chr174146471241464780-intron-Distal5.956569.64293K562DDX42
chr174146628241466338-intron-Distal4.4862710.33866HepG2HLTF
chr174146362441463684-intron-Distal4.6934221.96583K562YWHAG
chr174146615941466265-intron-Distal3.396485.08123K562DDX52
chr174146631441466341-intron-Distal5.66688400.00000K562SLTM
chr174146376641463837-intron-Distal4.4305310.03553HepG2HLTF
chr174146633941466412-intron-Distal4.5470111.52454K562FUS
chr174146634241466402-intron-Distal3.542877.17328K562TAF15
chr174146475641464768-intron-Distal4.1296110.88359HepG2SMNDC1
chr174146633641466359-intron-Distal3.677907.95558K562YWHAG
chr174146640841466460-intron-Distal3.736446.09767K562UCHL5
chr174146626341466382-intron-Distal3.6512621.88392K562DROSHA
chr174146627941466392-intron-Distal3.433555.17397K562SAFB
chr174146627341466314-intron-Distal5.1407971.79075K562SLTM
chr174146471941464756-intron-Distal5.36763400.00000HepG2SMNDC1
chr174146615641466270-intron-Distal3.231728.56151K562EWSR1
chr174146641141466467-intron-Distal3.044013.81203HepG2TROVE2
chr174146627641466315-intron-Distal4.4530214.65767K562UCHL5
chr174146622041466254-intron-Distal4.8132866.05243K562SLTM
chr174146640941466459-intron-Distal4.8253810.02898K562PTBP1
chr174146475241464756-intron-Distal7.9152494.29206K562SF3B4
chr174146636541466409-intron-Distal3.274369.14601K562NONO
chr174146470341464752-intron-Distal8.71411170.60714K562SF3B4
chr174146640741466457-intron-Distal3.055584.29582HepG2HLTF
chr174146370941463742-intron-Distal3.266346.23816K562YWHAG
chr174146470141464713-intron-Distal4.2903243.75444K562SMNDC1
chr174146371441463746-intron-Distal5.8077211.63081K562SLTM
chr174146374641463833-intron-Distal4.3869556.52336K562SLTM
chr174146625441466273-intron-Distal4.7651243.79918K562SLTM
chr174146641941466456-intron-Distal3.857393.37829HepG2DROSHA
chr174146383741463885-intron-Distal3.270677.74487K562YWHAG
chr174146469941464763-intron-Distal6.24584400.00000HepG2SF3A3
chr174146614141466261-intron-Distal3.7134320.67834K562YWHAG
chr174146471741464756-intron-Distal4.8532759.98180K562SMNDC1
chr174146635641466406-intron-Distal4.932917.69933K562RBFOX2
chr174146375441463838-intron-Distal3.1948511.46101K562BUD13
chr174146471141464786-intron-Distal6.1273215.11967HepG2SF3B4
chr174146383041463900-intron-Distal3.2442311.75385K562UCHL5
chr174146377841463834-intron-Distal3.339923.02835K562XRCC6
chr174146362641463683-intron-Distal3.606357.49291K562PTBP1
chr174146616341466255-intron-Distal3.164595.21316K562PPIL4
chr174146363941463675-intron-Distal3.108628.51883K562SLTM
chr174146617841466222-intron-Distal4.197553.19943HepG2DROSHA
chr174146628741466316-intron-Distal4.1042011.97167K562PTBP1
chr174146471341464717-intron-Distal4.8116161.60908K562SMNDC1
chr174146627541466432-intron-Distal3.7083413.40605K562NIPBL
chr174146616641466266-intron-Distal3.238776.61669K562RBFOX2
chr174146628641466336-intron-Distal3.3796617.83289K562YWHAG
chr174146641641466451-intron-Distal3.768758.40395K562YWHAG
chr174146629141466413-intron-Distal3.578053.49650HepG2CDC40
chr174146627941466374-intron-Distal3.211194.80598K562METAP2
chr174146376241463833-intron-Distal4.7157327.43518K562YWHAG
chr174146469841464767-intron-Distal8.02139400.00000K562GEMIN5
chr174146631541466358-intron-Distal3.9159811.53978K562UCHL5
chr174146469541464759-intron-Distal8.2943455.93329K562SF3B1
chr174146631341466339-intron-Distal3.768447.13471K562FUS
chr174146613841466181-intron-Distal5.7228611.26850K562NONO
chr174146370141463745-intron-Distal3.393083.26015K562PTBP1
chr174146640541466466-intron-Distal4.202193.91527K562PPIL4
chr174146627041466400-intron-Distal3.8724328.80632HepG2SLTM
chr174146635341466400-intron-Distal4.671433.60282K562LSM11
chr174146640741466471-intron-Distal3.3068112.11063K562SAFB2
chr174146636341466404-intron-Distal3.524607.00576K562PTBP1
chr174146606341466105-intron-Distal4.256556.70827HepG2SLTM
chr174146628741466405-intron-Distal4.226888.41036K562PPIL4
chr174146614841466270-intron-Distal4.2227821.43995HepG2SLTM
chr174146615641466223-intron-Distal3.2179517.97277K562SAFB2
chr174146471541464719-intron-Distal5.39204400.00000HepG2SMNDC1
chr174146362841463683-intron-Distal4.8702814.94550K562SAFB2
chr174146475641464768-intron-Distal7.4466423.96319K562SF3B4
chr174146615441466220-intron-Distal4.7813386.19394K562SLTM
chr174146616841466259-intron-Distal3.8189617.52429K562PTBP1
chr174146618141466264-intron-Distal4.3356620.03333K562NONO
chr174146383341463900-intron-Distal4.1975948.39745K562SLTM
chr174146631641466336-intron-Distal3.4922211.51667K562PTBP1
chr174146643041466456-intron-Distal4.113855.06257HepG2SLTM
chr174146641041466461-intron-Distal4.2251426.25404K562SLTM
chr174146642141466464-intron-Distal4.042283.56077K562TAF15
chr174146633641466363-intron-Distal3.193548.25871K562PTBP1
chr174146634241466410-intron-Distal5.4592684.47179K562SLTM
chr174146622341466270-intron-Distal4.1471016.36435K562SAFB2
chr174146370441463750-intron-Distal3.496065.49916K562SAFB2
chr174146470941464762-intron-Distal4.080364.79018HepG2EFTUD2
chr174146625641466313-intron-Distal3.582776.94428K562FUS
chr174146627241466394-intron-Distal3.167257.74856K562GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LINC00910 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LINC00910 is not available on ENCORE database.

  • 14 RBPs can affect the levels of LINC00910.  








The Knockdown/knockout RNA-Seq assay for LINC00910 is not available on ENCORE database.





14 RBPs can affect the gene expression of LINC00910 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LINC00910ENSG00000188825.964.815407.362803.137909.010307.81390HepG2HNRNPC
LINC00910ENSG00000188825.925.796406.841601.914702.626501.96930HepG2HNRNPL
LINC00910ENSG00000188825.94.4038021.35390-2.277702.358701.91290HepG2SRSF1
LINC00910ENSG00000188825.946.5219084.36500-0.858701.832201.35120K562AGGF1
LINC00910ENSG00000188825.912.2651037.62080-1.617002.991002.36520K562FXR1
LINC00910ENSG00000188825.9169.3555030.311102.4820017.0971015.69210K562HNRNPC
LINC00910ENSG00000188825.917.3861072.11320-2.052303.809302.59540K562PABPN1
LINC00910ENSG00000188825.9142.5448057.879401.300205.618004.42710K562PCBP3
LINC00910ENSG00000188825.925.9547087.09570-1.746603.863603.23670K562PUS1
LINC00910ENSG00000188825.949.2561084.82650-0.784201.974601.45840K562RBM15
LINC00910ENSG00000188825.911.0065035.57660-1.692602.811402.09990K562SRSF1
LINC00910ENSG00000188825.940.3583014.965101.431202.320301.39410K562SUPV3L1
LINC00910ENSG00000188825.920.1291044.52900-1.145502.022601.32060K562SYNCRIP
LINC00910ENSG00000188825.9123.5372066.802200.886903.044401.56470K562UBE2L3
LINC00910ENSG00000188825.971.0744035.926300.984202.486701.65470K562WDR3
LINC00910ENSG00000188825.983.1962032.042201.376404.874503.68040K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LINC00910 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LINC00910 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LINC00910 is not avaliable on ENCORE database.