R3HDM1

General Information

Gene Name       : R3HDM1
Gene ID             : ENSG00000048991.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: R3HDM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878R3HDM1ENSG00000048991.1659.8960.9960.44ENCSR000AEF
HepG2R3HDM1ENSG00000048991.1639.9246.9043.41ENCSR985KAT
K562R3HDM1ENSG00000048991.1652.5160.1656.33ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for R3HDM1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • R3HDM1 RNA is bound by 29 proteins.  







eCLIP assay for R3HDM1 is not avaliable on ENCORE database.





29 proteins are bound to R3HDM1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2136360084136360174+3'-UTR,5'-UTR,CDS,intron-Distal3.097815.39278K562ZNF622
chr2136360058136360110+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.331864.18806HepG2U2AF2
chr2136482157136482249+3'-UTR4.683244.02664K562ZC3H11A
chr2136289050136289106+5'-UTR4.528598.49542HepG2NCBP2
chr2136360148136360210+5'-UTR,CDS,intron-Distal3.191534.34695HepG2BCLAF1
chr2136396570136396642+CDS3.237835.59833HepG2GRWD1
chr2136481616136481778+CDS3.020603.27329HepG2IGF2BP3
chr2136409281136409363+CDS,intron-Proximal3.8125310.00445HepG2U2AF2
chr2136473145136473236+CDS,intron-Distal3.728568.83002HepG2IGF2BP1
chr2136418911136418965+CDS,intron-Proximal4.4875215.51276K562IGF2BP1
chr2136409438136409540+CDS3.769577.21923K562IGF2BP2
chr2136479493136479556+CDS,intron-Proximal4.648935.09622HepG2IGF2BP1
chr2136437811136437894+CDS5.4409610.77700K562IGF2BP1
chr2136393657136393776+CDS,intron-Proximal6.1501115.31608HepG2BCLAF1
chr2136467675136467778+CDS3.530805.28972K562IGF2BP1
chr2136362571136362631+CDS,intron-Distal,intron-Proximal4.520949.27995K562PRPF8
chr2136362545136362626+CDS,intron-Distal,intron-Proximal7.5712616.30191HepG2PRPF8
chr2136396187136396212+CDS,intron-Proximal4.512874.78529HepG2BCLAF1
chr2136437742136437811+CDS,intron-Proximal3.210905.55419K562IGF2BP1
chr2136389234136389329+CDS,intron-Proximal3.465975.37841K562SF3B4
chr2136432901136432931+CDS,intron-Proximal5.112455.59872HepG2IGF2BP1
chr2136473210136473264+CDS,intron-Distal4.430444.86695K562IGF2BP1
chr2136362426136362484+CDS,intron-Distal3.630116.67313HepG2BCLAF1
chr2136432937136433052+CDS4.603295.82109K562IGF2BP2
chr2136409466136409534+CDS4.010436.29174K562ZNF622
chr2136407469136407515+CDS,intron-Distal,intron-Proximal3.220673.80334HepG2U2AF2
chr2136481592136481735+CDS4.111826.25229K562IGF2BP2
chr2136437806136437889+CDS3.224913.20659K562SND1
chr2136409299136409325+CDS,intron-Proximal3.886053.01429K562IGF2BP1
chr2136403021136403097+CDS4.3764112.36286HepG2IGF2BP1
chr2136432900136432911+CDS,intron-Proximal4.3951510.10555K562IGF2BP1
chr2136362511136362578+CDS,intron-Distal3.671884.20387K562ZNF622
chr2136473240136473265+CDS,intron-Distal,intron-Proximal4.157473.31982HepG2IGF2BP1
chr2136409324136409406+CDS4.876415.59872HepG2IGF2BP1
chr2136362508136362624+CDS,intron-Distal,intron-Proximal4.5644212.88094HepG2BCLAF1
chr2136393470136393573+CDS,intron-Proximal4.4607410.24470HepG2BCLAF1
chr2136399086136399158+CDS,intron-Distal,intron-Proximal4.1371113.35401HepG2U2AF2
chr2136432901136432933+CDS,intron-Proximal4.132463.02541K562IGF2BP2
chr2136418956136418964+CDS,intron-Proximal4.148935.10201HepG2IGF2BP1
chr2136432911136433026+CDS4.1414812.86436K562IGF2BP1
chr2136389428136389572+CDS,intron-Proximal3.4598811.20660HepG2BCLAF1
chr2136418916136418956+CDS3.813705.85073HepG2IGF2BP1
chr2136481694136481757+CDS4.131974.43679K562IGF2BP1
chr2136481695136481754+CDS3.600743.85040HepG2IGF2BP1
chr2136409548136409603+CDS,intron-Proximal3.537735.10201HepG2IGF2BP1
chr2136409428136409587+CDS3.002365.40931HepG2PCBP2
chr2136396468136396570+CDS3.130837.67372HepG2GRWD1
chr2136407439136407499+CDS,intron-Distal,intron-Proximal3.193683.56114HepG2KHSRP
chr2136409543136409600+CDS4.408635.30214K562IGF2BP2
chr2136402937136402990+CDS,intron-Proximal3.303578.20705HepG2U2AF2
chr2136402937136403008+CDS,intron-Proximal3.860763.47293K562U2AF2
chr2136467020136467107+CDS,intron-Proximal4.647094.84422HepG2IGF2BP1
chr2136481605136481675+CDS4.695254.59164HepG2IGF2BP1
chr2136345429136345573+intron-Distal4.8759113.27672HepG2PCBP2
chr2136316621136316740+intron-Distal3.966967.39675K562EIF4G2
chr2136407587136407670+intron-Distal,intron-Proximal4.488775.62258K562KHSRP
chr2136354086136354178+intron-Distal4.677575.20135HepG2QKI
chr2136407269136407353+intron-Distal3.330578.54122K562KHSRP
chr2136342117136342231+intron-Distal4.776545.54528HepG2QKI
chr2136338201136338270+intron-Distal3.035964.86332HepG2SUGP2
chr2136441458136441492+intron-Distal4.151453.98095HepG2HNRNPL
chr2136370469136370543+intron-Distal3.624943.29239HepG2CSTF2
chr2136407670136407709+intron-Distal,intron-Proximal3.666843.02234K562KHSRP
chr2136343246136343314+intron-Distal5.1784812.15012HepG2CSTF2
chr2136362669136362740+intron-Distal,intron-Proximal5.062999.88915K562LIN28B
chr2136409128136409230+intron-Distal,intron-Proximal4.465085.19823K562KHSRP
chr2136339032136339166+intron-Distal5.138215.89032HepG2QKI
chr2136296169136296243+intron-Distal3.267884.48901HepG2HNRNPC
chr2136407844136407910+intron-Distal3.066613.70059HepG2U2AF2
chr2136422988136423037+intron-Distal5.448028.73554HepG2DGCR8
chr2136352340136352427+intron-Distal4.615739.54872HepG2PTBP1
chr2136312061136312145+intron-Distal4.471814.54503HepG2ILF3
chr2136345628136345721+intron-Distal6.4126122.81035HepG2PTBP1
chr2136338072136338121+intron-Distal4.414774.78128HepG2SUGP2
chr2136343246136343334+intron-Distal5.104025.61356K562FMR1
chr2136319154136319216+intron-Distal4.105383.18711HepG2ILF3
chr2136352338136352415+intron-Distal5.548017.91717K562PTBP1
chr2136384608136384694+intron-Distal3.039015.34873K562KHSRP
chr2136345645136345737+intron-Distal3.473255.42643HepG2MATR3
chr2136398796136398989+intron-Distal5.4025610.04361HepG2KHSRP
chr2136309763136309816+intron-Distal3.371754.98883HepG2HNRNPC
chr2136441532136441617+intron-Distal4.184498.44070HepG2HNRNPL
chr2136345518136345561+intron-Distal3.481064.48652HepG2PTBP1
chr2136345624136345795+intron-Distal6.1356620.14210K562PTBP1
chr2136441511136441609+intron-Distal3.969456.89427K562HNRNPL
chr2136398802136398889+intron-Distal4.090078.98664K562KHSRP
chr2136312075136312139+intron-Distal3.922643.57189K562ILF3
chr2136345835136345934+intron-Distal6.0246022.70665K562PTBP1
chr2136441492136441532+intron-Distal5.027906.10900HepG2HNRNPL
chr2136345831136345960+intron-Distal6.3083219.99216HepG2PTBP1
chr2136338400136338510+intron-Distal3.536023.10961HepG2MATR3
chr2136374337136374443+intron-Distal,intron-Proximal3.243774.76345K562KHSRP
chr2136345612136345758+intron-Distal3.343295.15820K562MATR3
chr2136398889136399045+intron-Distal,intron-Proximal4.211799.70733K562KHSRP
chr2136338478136338557+intron-Distal4.026757.03506HepG2SUGP2
chr2136407925136407972+intron-Distal3.031413.42396HepG2U2AF2
chr2136345721136345776+intron-Distal4.333348.79903HepG2PTBP1
chr2136407355136407431+intron-Distal,intron-Proximal5.5335912.96053K562KHSRP
chr2136345529136345576+intron-Distal5.135807.34317K562PTBP1
chr2136316645136316733+intron-Distal4.302075.18738K562TARDBP
chr2136338953136339047+intron-Distal5.212099.34617HepG2SUGP2
chr2136339433136339487+intron-Distal4.352003.84389HepG2SUGP2
chr2136345809136345913+intron-Distal4.057713.33944K562MATR3
chr2136338221136338385+intron-Distal3.147163.80761K562PTBP1
chr2136345934136346018+intron-Distal3.6823510.47773K562PTBP1
chr2136441555136441585+intron-Distal4.723324.74405K562AGGF1
chr2136320680136320766+intron-Distal3.670738.03418HepG2QKI
chr2136338807136338883+intron-Distal3.863836.25586HepG2SUGP2
chr2136422987136423039+intron-Distal4.591183.83114K562DGCR8
chr2136422946136422988+intron-Distal4.390284.42847HepG2DGCR8
chr2136407297136407426+intron-Distal,intron-Proximal4.333748.24227HepG2KHSRP
chr2136291531136291603+intron-Distal3.259473.68839K562KHSRP
chr2136407750136407791+intron-Distal3.793723.26999K562KHSRP
chr2136343246136343328+intron-Distal4.4407411.16997K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for R3HDM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for R3HDM1 is not available on ENCORE database.

  • 109 RBPs can affect the levels of R3HDM1.  








The Knockdown/knockout RNA-Seq assay for R3HDM1 is not available on ENCORE database.





109 RBPs can affect the gene expression of R3HDM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
R3HDM1ENSG00000048991.122994.623303641.62150-0.282202.355901.79840HepG2BOP1
R3HDM1ENSG00000048991.121751.748302397.75030-0.452906.369305.26010HepG2CALR
R3HDM1ENSG00000048991.12619.194501135.32240-0.874606.556805.37900HepG2CNOT7
R3HDM1ENSG00000048991.122262.186003343.27010-0.563507.005505.95080HepG2CPSF6
R3HDM1ENSG00000048991.121436.273901693.48270-0.237702.354201.75320HepG2CELF1
R3HDM1ENSG00000048991.121418.845901820.95720-0.360006.568205.49630HepG2DAZAP1
R3HDM1ENSG00000048991.12905.528001295.55640-0.516704.283503.51980HepG2DDX3X
R3HDM1ENSG00000048991.12826.426401285.56830-0.637405.442304.40270HepG2DDX55
R3HDM1ENSG00000048991.121055.346901535.42560-0.540906.236604.80600HepG2DHX30
R3HDM1ENSG00000048991.121158.223201591.93680-0.458906.680805.62420HepG2DNAJC21
R3HDM1ENSG00000048991.121246.309601577.89500-0.340305.574404.69530HepG2DNAJC2
R3HDM1ENSG00000048991.12991.801201276.33090-0.363902.565501.49470HepG2EFTUD2
R3HDM1ENSG00000048991.12580.217101069.86780-0.8828010.154409.06030HepG2EIF2S1
R3HDM1ENSG00000048991.122450.522201151.154201.0899013.2538011.81340HepG2EIF4B
R3HDM1ENSG00000048991.122631.868401796.445100.5508012.7106011.17500HepG2EIF4G1
R3HDM1ENSG00000048991.12886.799001258.03020-0.504505.528804.34540HepG2EWSR1
R3HDM1ENSG00000048991.12866.339801110.70820-0.358503.234201.95690HepG2FAM120A
R3HDM1ENSG00000048991.121464.237801174.782900.317702.096501.32800HepG2G3BP2
R3HDM1ENSG00000048991.122849.082403790.03020-0.411703.378702.67570HepG2GPKOW
R3HDM1ENSG00000048991.121262.437701607.18820-0.348303.131702.45050HepG2HNRNPA1
R3HDM1ENSG00000048991.121123.413501673.48890-0.5750011.067109.42820HepG2HNRNPA2B1
R3HDM1ENSG00000048991.121768.974102403.22260-0.442108.450807.28690HepG2HNRNPF
R3HDM1ENSG00000048991.121726.286601120.500600.623407.431906.32840HepG2HNRNPK
R3HDM1ENSG00000048991.121411.475101658.76700-0.232903.058202.35160HepG2HNRNPL
R3HDM1ENSG00000048991.122353.628203616.87990-0.619908.051707.04050HepG2HNRNPLL
R3HDM1ENSG00000048991.121008.416801775.88530-0.8164023.5515021.91910HepG2HNRNPU
R3HDM1ENSG00000048991.121527.261002366.48850-0.6318011.318009.94970HepG2IGF2BP1
R3HDM1ENSG00000048991.121410.609001124.847000.326502.155001.55030HepG2IGF2BP2
R3HDM1ENSG00000048991.121456.276901814.00710-0.316905.617904.60500HepG2ILF2
R3HDM1ENSG00000048991.12705.889101106.81200-0.648904.404002.71190HepG2ILF3
R3HDM1ENSG00000048991.12846.607301176.83580-0.475108.076406.40390HepG2KIF1C
R3HDM1ENSG00000048991.122137.766601200.000400.8330010.141108.99260HepG2MATR3
R3HDM1ENSG00000048991.122801.847003688.36920-0.396602.267201.39520HepG2MTPAP
R3HDM1ENSG00000048991.121458.901701805.65490-0.307603.268702.44220HepG2NOL12
R3HDM1ENSG00000048991.12747.926401037.68260-0.472402.111501.35150HepG2PABPC1
R3HDM1ENSG00000048991.12848.344501093.87480-0.366702.324201.65800HepG2PABPC4
R3HDM1ENSG00000048991.121551.807001145.676000.437607.018406.12400HepG2PCBP1
R3HDM1ENSG00000048991.121261.461601583.94690-0.328403.730902.88710HepG2PPIL4
R3HDM1ENSG00000048991.122707.661302221.124400.285703.248902.41690HepG2PRPF4
R3HDM1ENSG00000048991.121842.585701165.808400.6603015.1385014.05780HepG2PTBP1
R3HDM1ENSG00000048991.121284.296601723.64240-0.424504.450903.71550HepG2PUF60
R3HDM1ENSG00000048991.121490.977201828.38010-0.294302.861602.18010HepG2PUM2
R3HDM1ENSG00000048991.121708.200401262.513600.436105.724904.87380HepG2QKI
R3HDM1ENSG00000048991.121889.733101297.399400.542506.497405.72720HepG2NELFE
R3HDM1ENSG00000048991.121491.877501208.411900.303903.623002.93020HepG2RECQL
R3HDM1ENSG00000048991.121675.420002588.85570-0.627809.453808.31320HepG2RPLP0
R3HDM1ENSG00000048991.121536.010401209.293300.344903.189202.53590HepG2RPS19
R3HDM1ENSG00000048991.121327.895801581.50130-0.252203.038702.36940HepG2SAFB2
R3HDM1ENSG00000048991.122211.050703580.09650-0.695307.478206.36880HepG2SF3B1
R3HDM1ENSG00000048991.121498.861401213.684900.304403.613502.95080HepG2SF3B4
R3HDM1ENSG00000048991.121426.102501652.67240-0.212702.451501.78530HepG2SLBP
R3HDM1ENSG00000048991.122003.007803983.44930-0.9919010.463508.95300HepG2SNRNP70
R3HDM1ENSG00000048991.121203.742002249.84990-0.9023033.4022032.16470HepG2SRFBP1
R3HDM1ENSG00000048991.122451.135901266.853700.9521035.5153034.24360HepG2SRSF1
R3HDM1ENSG00000048991.121558.755502361.08590-0.5991014.6957013.31280HepG2SRSF7
R3HDM1ENSG00000048991.12752.049301030.67840-0.454706.099205.33600HepG2SRSF9
R3HDM1ENSG00000048991.121589.567301953.34250-0.297304.230503.62530HepG2SSB
R3HDM1ENSG00000048991.121009.461901279.76430-0.342301.954901.37190HepG2SUPV3L1
R3HDM1ENSG00000048991.121650.380301138.779200.535208.874607.96230HepG2TAF15
R3HDM1ENSG00000048991.121318.811301725.58500-0.387801.757601.33990HepG2TIAL1
R3HDM1ENSG00000048991.121420.758201741.03130-0.293303.713203.08050HepG2TRIM56
R3HDM1ENSG00000048991.12549.66070755.99670-0.459803.131002.32490HepG2UCHL5
R3HDM1ENSG00000048991.121782.123602142.14250-0.265503.383802.62420HepG2UPF1
R3HDM1ENSG00000048991.12789.427601171.87450-0.569903.414202.29270HepG2UPF2
R3HDM1ENSG00000048991.121825.629202201.84180-0.270303.263702.13560HepG2UTP18
R3HDM1ENSG00000048991.123366.873502068.158300.7030024.5196023.00460HepG2UTP3
R3HDM1ENSG00000048991.122319.937701528.473900.601904.444203.11610HepG2XRCC6
R3HDM1ENSG00000048991.12969.288401259.78760-0.378202.533401.83750HepG2XRN2
R3HDM1ENSG00000048991.121588.436602192.02040-0.4647010.904509.72000HepG2ZC3H8
R3HDM1ENSG00000048991.121935.864602355.95030-0.283305.064804.38010HepG2ZNF622
R3HDM1ENSG00000048991.122018.888502977.52210-0.5606014.6460013.44650K562AGGF1
R3HDM1ENSG00000048991.122541.793003271.61760-0.364203.890102.68260K562AKAP8
R3HDM1ENSG00000048991.121887.723603098.19030-0.7148012.4554010.92770K562AKAP8L
R3HDM1ENSG00000048991.121320.671502548.62770-0.9484018.0480016.71630K562AQR
R3HDM1ENSG00000048991.122606.473403250.64100-0.318604.543903.34140K562ATP5C1
R3HDM1ENSG00000048991.122754.861004075.16420-0.564902.695901.83440K562BOP1
R3HDM1ENSG00000048991.121993.950401592.071000.324602.593701.58130K562CCAR1
R3HDM1ENSG00000048991.123025.662803558.48540-0.234002.427601.33710K562CCDC124
R3HDM1ENSG00000048991.122602.104304664.82670-0.842104.165202.81900K562CNOT7
R3HDM1ENSG00000048991.123635.895104342.87950-0.256302.786601.67770K562CPEB4
R3HDM1ENSG00000048991.122444.870304333.23350-0.825709.315307.85730K562CPSF6
R3HDM1ENSG00000048991.12997.243301239.34200-0.313602.613601.58900K562CSTF2
R3HDM1ENSG00000048991.123869.307005010.41420-0.372905.207003.86120K562CELF1
R3HDM1ENSG00000048991.121072.393301557.58860-0.538503.868002.31910K562EEF2
R3HDM1ENSG00000048991.12918.676201504.94040-0.712108.857107.13440K562EFTUD2
R3HDM1ENSG00000048991.121228.075101467.55080-0.257002.572901.41800K562EIF2S1
R3HDM1ENSG00000048991.122413.978001619.400300.575903.581602.42220K562EIF3A
R3HDM1ENSG00000048991.121786.916501217.522300.553409.268107.81670K562EIF3G
R3HDM1ENSG00000048991.121004.324601395.83650-0.474904.754103.67800K562EIF4A3
R3HDM1ENSG00000048991.121864.484303669.00230-0.976605.394004.18530K562FIP1L1
R3HDM1ENSG00000048991.122514.756704408.64330-0.809905.955204.69180K562FMR1
R3HDM1ENSG00000048991.122482.429703736.58440-0.590003.807302.72020K562FTO
R3HDM1ENSG00000048991.121774.802801451.613500.289903.293302.64150K562FXR1
R3HDM1ENSG00000048991.122503.578804137.30330-0.724708.279706.89950K562GPKOW
R3HDM1ENSG00000048991.122080.614403275.26310-0.6546011.6260010.05030K562GRSF1
R3HDM1ENSG00000048991.121576.692102051.46240-0.379804.162902.84800K562HNRNPA1
R3HDM1ENSG00000048991.121350.636602271.92550-0.7503017.2434015.13420K562HNRNPU
R3HDM1ENSG00000048991.121086.560301663.37310-0.614306.452504.20800K562ILF3
R3HDM1ENSG00000048991.122351.109903288.15180-0.483906.898105.45580K562KIF1C
R3HDM1ENSG00000048991.122390.321003532.39560-0.563402.462201.58680K562KRR1
R3HDM1ENSG00000048991.122592.965404038.41410-0.639205.941804.62990K562METAP2
R3HDM1ENSG00000048991.123427.193604343.87100-0.342003.054901.86670K562MSI2
R3HDM1ENSG00000048991.122335.012003045.72260-0.383407.463806.19350K562MTPAP
R3HDM1ENSG00000048991.121910.336302581.87250-0.434603.014002.08610K562NAA15
R3HDM1ENSG00000048991.122738.283503384.27120-0.305604.998204.03640K562NSUN2
R3HDM1ENSG00000048991.122546.246604164.54880-0.709803.665202.70070K562PPIG
R3HDM1ENSG00000048991.121013.791001464.48010-0.530605.141904.11900K562PRPF8
R3HDM1ENSG00000048991.121586.778202031.98850-0.356803.535702.49430K562PSIP1
R3HDM1ENSG00000048991.123237.420004446.45240-0.457805.022503.92440K562PUF60
R3HDM1ENSG00000048991.123778.458004633.98880-0.294504.021002.86020K562PUM2
R3HDM1ENSG00000048991.122308.555603072.95810-0.412603.499602.90010K562PUS1
R3HDM1ENSG00000048991.122438.329802993.80040-0.296103.789903.11190K562RBM15
R3HDM1ENSG00000048991.121137.461601583.02030-0.476904.907303.74910K562RBM22
R3HDM1ENSG00000048991.121065.709001336.74410-0.326902.853001.50190K562RBM25
R3HDM1ENSG00000048991.122266.989601574.804600.525505.424203.95520K562RPS3
R3HDM1ENSG00000048991.122793.661003339.11480-0.257303.271502.38760K562SF3A3
R3HDM1ENSG00000048991.122697.693203934.24240-0.544402.513601.58850K562SF3B1
R3HDM1ENSG00000048991.121201.236901465.34260-0.286702.510801.69810K562SF3B4
R3HDM1ENSG00000048991.122934.289303420.96840-0.221403.555302.51090K562SRPK2
R3HDM1ENSG00000048991.121218.907701528.56630-0.326602.493301.50390K562SRSF5
R3HDM1ENSG00000048991.121005.758701417.94180-0.495503.946402.71700K562SUPV3L1
R3HDM1ENSG00000048991.123050.274802243.158600.443303.824802.85830K562SYNCRIP
R3HDM1ENSG00000048991.121074.731601637.99940-0.608006.957405.78530K562TARDBP
R3HDM1ENSG00000048991.121160.716801410.66750-0.281402.351601.61160K562U2AF2
R3HDM1ENSG00000048991.121185.822601500.71250-0.339802.371401.43520K562UCHL5
R3HDM1ENSG00000048991.122953.783803588.39860-0.280802.625301.92620K562UPF1
R3HDM1ENSG00000048991.122933.941904043.16260-0.462604.535902.99130K562UTP3
R3HDM1ENSG00000048991.122290.217103070.50520-0.423005.474404.22420K562WDR3
R3HDM1ENSG00000048991.124173.037103192.791800.386209.374007.91610K562WDR43
R3HDM1ENSG00000048991.122559.265201679.822700.607303.044401.37240K562XRCC6
R3HDM1ENSG00000048991.121998.988902871.13120-0.522306.910805.44910K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for R3HDM1 is not available on ENCORE database.





34 RBPs can affect the splicing of R3HDM1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.334000.000000.00004includedK562SRSF1
SER3HDM1ENSG00000048991.12chr2+136374237136374327136362425136362586136379063136379178-0.154000.000040.00158excludedK562SRSF1
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.475000.000000.00000includedK562MATR3
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.137000.000250.05715includedK562WDR3
SER3HDM1ENSG00000048991.12chr2+136374237136374327136362425136362586136379063136379178-0.208000.000000.00268excludedK562WDR3
SER3HDM1ENSG00000048991.12chr2+136399105136399360136396465136396692136402948136403097-0.181000.000000.00000excludedHepG2U2AF1
SER3HDM1ENSG00000048991.12chr2+136380223136380302136379063136379178136389287136389347-0.099000.000030.00105excludedHepG2U2AF1
SER3HDM1ENSG00000048991.12chr2+136374237136374327136362425136362586136379063136379178-0.134000.000040.00258excludedK562AKAP8L
SER3HDM1ENSG00000048991.12chr2+136399105136399360136396465136396692136402948136403097-0.153000.000010.00322excludedHepG2HNRNPM
SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.154000.000260.02904includedK562XRCC6
SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.191000.001630.03995includedHepG2HNRNPK
SER3HDM1ENSG00000048991.12chr2+136399105136399360136396465136396692136402948136403097-0.141000.000700.01990excludedHepG2HNRNPK
SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.286000.000000.00000includedHepG2U2AF2
SER3HDM1ENSG00000048991.12chr2+136399105136399360136396465136396692136402948136403097-0.099000.000000.00000excludedHepG2U2AF2
SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.216000.000340.02708includedHepG2AKAP1
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.153000.008720.07282includedK562AQR
SER3HDM1ENSG00000048991.12chr2+1363911931363913981363894301363895711363934591363935680.071000.005130.04750includedK562AQR
SER3HDM1ENSG00000048991.12chr2+136418839136418963136409299136409602136432901136433056-0.069000.000910.01130excludedK562AQR
SER3HDM1ENSG00000048991.12chr2+136374237136374327136362425136362586136379063136379178-0.098000.006070.07207excludedK562PUS1
SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.374000.000000.00000includedHepG2SFPQ
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.685000.000000.00000includedHepG2PTBP1
SER3HDM1ENSG00000048991.12chr2+136399105136399360136396465136396692136402948136403097-0.129000.000000.00103excludedHepG2FTO
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.105000.000660.08046includedK562LARP4
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.322000.000020.00222includedK562EFTUD2
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.622000.000000.00000includedHepG2MATR3
SER3HDM1ENSG00000048991.12chr2+136399105136399360136396465136396692136402948136403097-0.176000.001040.02332excludedK562U2AF1
SER3HDM1ENSG00000048991.12chr2+136473119136473264136467628136467801136479493136479576-0.155000.000460.01202excludedK562U2AF1
SER3HDM1ENSG00000048991.12chr2+136399105136399360136396465136396692136402948136403097-0.161000.000000.00126excludedK562HNRNPM
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.144000.000390.04709includedHepG2LARP4
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.211000.000000.00001includedHepG2CDC40
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.490000.000000.00000includedHepG2SRSF1
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.263000.000160.02542includedHepG2SSB
SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.232000.000600.04643includedHepG2IGF2BP3
SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.265000.001560.09259includedHepG2TIAL1
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.218000.001670.06917includedHepG2SF3B4
SER3HDM1ENSG00000048991.12chr2+136374237136374327136362425136362586136379063136379178-0.104000.003980.09426excludedK562UTP18
SER3HDM1ENSG00000048991.12chr2+136380223136380302136379063136379178136389287136389347-0.107000.000800.01661excludedK562U2AF2
SER3HDM1ENSG00000048991.12chr2+136380223136380302136379063136379178136389287136389347-0.190000.000000.00017excludedK562HNRNPU
SER3HDM1ENSG00000048991.12chr2+136374237136374327136362425136362586136379063136379178-0.115000.001160.03064excludedK562RBM15
SER3HDM1ENSG00000048991.12chr2+136380223136380302136379063136379178136389287136389347-0.057000.000060.00291excludedK562AGGF1
SER3HDM1ENSG00000048991.12chr2+136374237136374327136362425136362586136379063136379178-0.141000.000150.00617excludedK562AGGF1
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.158000.000030.00204includedK562SF3B1
SER3HDM1ENSG00000048991.12chr2+136374237136374327136362425136362586136379063136379178-0.113000.001510.05563excludedK562SF3B1
SER3HDM1ENSG00000048991.12chr2+1363737211363737631363623751363625861363742371363743270.282000.000400.06027includedK562ZC3H8
SER3HDM1ENSG00000048991.12chr2+136399105136399360136396465136396692136402948136403097-0.120000.001820.07060excludedK562HNRNPK
SER3HDM1ENSG00000048991.12chr2+1363912651363913981363894301363895711363934591363935680.150000.001070.04515includedHepG2HNRNPU
SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.309000.000000.00058includedHepG2FUS
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.522000.000000.00000includedK562PTBP1
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.251000.000000.00000includedK562HNRNPC
A3SSR3HDM1ENSG00000048991.12chr2+1364029171364030971364029481364030971363964451363966920.059000.003200.01951longerK562AQR
A5SSR3HDM1ENSG00000048991.12chr2+136399105136399360136399105136399174136402948136403097-0.536000.000580.02564shorterHepG2U2AF2
A5SSR3HDM1ENSG00000048991.12chr2+1363991051363993601363991051363991741364029481364030970.380000.001340.07643longerHepG2SRSF1
A5SSR3HDM1ENSG00000048991.12chr2+1363790631363791781363790631363791411363802231363803020.058000.000000.00109longerHepG2HNRNPUL1
A5SSR3HDM1ENSG00000048991.12chr2+136399105136399360136399105136399174136402948136403097-0.425000.000050.01075shorterHepG2FTO
A5SSR3HDM1ENSG00000048991.12chr2+1363964651363966921363964651363966441364029481364030970.115000.000500.04596longerHepG2U2AF1
RIR3HDM1ENSG00000048991.12chr2+1363892661363895081363892661363893471363894301363895080.098000.005370.03067includedK562AQR
MXER3HDM1ENSG00000048991.12chr2+1364676281364678011364731191364732641364670021364671061364794931364795760.089000.000300.008821includedHepG2FTO
MXER3HDM1ENSG00000048991.12chr2+1364188391364189631364329011364330561364092991364096021364377421364378940.115000.000010.000591includedHepG2FTO
MXER3HDM1ENSG00000048991.12chr2+136389287136389347136389430136389571136380223136380302136393459136393568-0.262000.000000.000012includedHepG2FTO
MXER3HDM1ENSG00000048991.12chr2+1363623751363625861363742371363743271363600691363602781363790631363791780.115000.001590.067861includedK562SF3B1
MXER3HDM1ENSG00000048991.12chr2+136362375136362586136379063136379178136360069136360278136389430136389571-0.052000.008440.055192includedK562AQR
MXER3HDM1ENSG00000048991.12chr2+136409299136409602136418839136418963136402948136403097136432901136433056-0.097000.000180.016602includedHepG2DROSHA
MXER3HDM1ENSG00000048991.12chr2+136409302136409602136418839136418963136402948136403097136432901136433056-0.074000.000990.044132includedHepG2DROSHA
MXER3HDM1ENSG00000048991.12chr2+136362375136362586136374237136374327136360069136360278136379063136379178-0.117000.000010.001792includedHepG2LARP4
MXER3HDM1ENSG00000048991.12chr2+1364092991364096021364188391364189631364029481364030971364329011364330560.106000.000030.002441includedK562FXR2
MXER3HDM1ENSG00000048991.12chr2+136467628136467801136473119136473264136467002136467106136479493136479576-0.153000.000000.004382includedK562GPKOW

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for R3HDM1 is not avaliable on ENCORE database.