WDR61

General Information

Gene Name       : WDR61
Gene ID             : ENSG00000140395.8
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: WDR61)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WDR61ENSG00000140395.875.9365.1670.55ENCSR000AEF
HepG2WDR61ENSG00000140395.850.2255.7753.00ENCSR985KAT
K562WDR61ENSG00000140395.891.8983.3987.64ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WDR61 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WDR61 RNA is bound by 10 proteins.  







eCLIP assay for WDR61 is not avaliable on ENCORE database.





10 proteins are bound to WDR61 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr157857570778575864-3'-UTR,CDS,intron-Distal,intron-Proximal4.195673.60623K562APOBEC3C
chr157858549878585562-3'-UTR,CDS,intron-Distal,intron-Proximal3.176534.51003HepG2PPIG
chr157858504878585131-3'-UTR,CDS,intron-Distal,intron-Proximal3.584684.52024HepG2PPIG
chr157858550678585606-3'-UTR,CDS,intron-Distal,intron-Proximal3.171633.94979HepG2BCLAF1
chr157858195178582050-3'-UTR,CDS,intron-Distal,intron-Proximal3.565886.36847HepG2BCLAF1
chr157858238978582461-3'-UTR,CDS,intron-Distal,intron-Proximal3.261134.57751HepG2U2AF2
chr157857560478575677-3'-UTR,intron-Distal6.9287915.06489K562PUM2
chr157859190378591951-5'-UTR,intron-Distal,intron-Proximal4.3701716.75565K562DDX3X
chr157859180478591875-5'-UTR,intron-Distal3.978455.39582HepG2RBM22
chr157858801578588070-5'-UTR,CDS,intron-Distal,intron-Proximal4.4675237.65376K562DDX3X
chr157857832478578411-CDS,intron-Distal,intron-Proximal5.3061318.31991K562PRPF8
chr157858728778587315-CDS,intron-Distal,intron-Proximal3.7215713.37398K562DDX3X
chr157858556278585623-CDS,intron-Distal,intron-Proximal4.106213.49332HepG2PPIG
chr157857759478577647-CDS,intron-Distal,intron-Proximal4.359824.34038HepG2BCLAF1
chr157857831378578408-CDS,intron-Distal,intron-Proximal6.356937.36776HepG2PRPF8
chr157857833678578384-CDS,intron-Distal,intron-Proximal3.853344.49024K562AQR
chr157858132178581382-intron-Distal,intron-Proximal3.979093.45805K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WDR61 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WDR61 is not available on ENCORE database.

  • 90 RBPs can affect the levels of WDR61.  








The Knockdown/knockout RNA-Seq assay for WDR61 is not available on ENCORE database.





90 RBPs can affect the gene expression of WDR61 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WDR61ENSG00000140395.41512.728701153.626000.390902.470701.96520HepG2AKAP1
WDR61ENSG00000140395.4724.67870473.420700.614103.234602.40240HepG2CNOT7
WDR61ENSG00000140395.4927.446401150.59770-0.311003.600902.77520HepG2DAZAP1
WDR61ENSG00000140395.41421.730301105.133800.363302.472001.87770HepG2DDX3X
WDR61ENSG00000140395.4929.70790713.139200.382502.004801.33510HepG2DDX55
WDR61ENSG00000140395.4510.69320677.07060-0.406803.598102.84350HepG2DKC1
WDR61ENSG00000140395.4492.94940611.42720-0.310702.139401.51340HepG2DNAJC21
WDR61ENSG00000140395.4438.41400606.02560-0.467104.923504.09310HepG2DNAJC2
WDR61ENSG00000140395.4662.79920912.62010-0.461403.173702.54070HepG2EIF2S1
WDR61ENSG00000140395.4652.75840981.91740-0.589103.666402.88040HepG2EIF4B
WDR61ENSG00000140395.41043.649001272.86710-0.286402.785002.18230HepG2ETF1
WDR61ENSG00000140395.4478.71880665.67540-0.475602.558901.81580HepG2FIP1L1
WDR61ENSG00000140395.4811.267001017.47930-0.326801.976101.38740HepG2FXR1
WDR61ENSG00000140395.4628.05950943.94640-0.587804.664503.81120HepG2G3BP1
WDR61ENSG00000140395.4732.119801002.00880-0.452703.310202.32900HepG2G3BP2
WDR61ENSG00000140395.4254.67580392.55090-0.624203.937202.85510HepG2GEMIN5
WDR61ENSG00000140395.4419.59370617.28480-0.556904.203403.42970HepG2HNRNPA1
WDR61ENSG00000140395.4587.04400784.29470-0.417902.627301.92830HepG2HNRNPF
WDR61ENSG00000140395.4723.11800955.63240-0.402202.825502.11870HepG2HNRNPK
WDR61ENSG00000140395.4841.218301048.08580-0.317203.497202.74700HepG2HNRNPL
WDR61ENSG00000140395.4389.91360682.07500-0.8068012.4975011.28680HepG2HNRNPU
WDR61ENSG00000140395.4565.75420772.30870-0.449003.737402.90620HepG2IGF2BP1
WDR61ENSG00000140395.4652.54730959.53120-0.556204.425303.58720HepG2IGF2BP2
WDR61ENSG00000140395.4546.78190696.71710-0.349603.502102.68550HepG2ILF2
WDR61ENSG00000140395.4597.61630965.06770-0.691405.081503.68540HepG2KHSRP
WDR61ENSG00000140395.4523.41790646.90420-0.305602.585801.59870HepG2KIF1C
WDR61ENSG00000140395.4747.106901017.83380-0.446103.123602.42730HepG2MAGOH
WDR61ENSG00000140395.4793.486901023.55680-0.367302.055501.50570HepG2MATR3
WDR61ENSG00000140395.4328.65440452.37640-0.461003.035901.76430HepG2NAA15
WDR61ENSG00000140395.4805.017101047.68870-0.380102.311701.73060HepG2NCBP2
WDR61ENSG00000140395.4918.284301140.93390-0.313202.682601.93070HepG2NOL12
WDR61ENSG00000140395.4594.52390933.13350-0.650305.701904.67750HepG2PABPC4
WDR61ENSG00000140395.4449.99750608.35650-0.435003.713902.87200HepG2PPIL4
WDR61ENSG00000140395.4547.003001089.14010-0.9936016.1169014.84050HepG2PUF60
WDR61ENSG00000140395.4987.749601156.19230-0.227202.159301.62220HepG2PUM1
WDR61ENSG00000140395.4883.993801155.33410-0.386203.600902.84070HepG2PUM2
WDR61ENSG00000140395.4780.11230943.03100-0.273602.145201.58350HepG2QKI
WDR61ENSG00000140395.4467.18560659.57290-0.497501.946901.34530HepG2RAVER1
WDR61ENSG00000140395.4683.65790855.81560-0.324002.401301.76880HepG2RBM25
WDR61ENSG00000140395.4642.85280827.97290-0.365102.301301.40520HepG2RBM27
WDR61ENSG00000140395.4715.98360902.37930-0.333802.893502.26450HepG2RECQL
WDR61ENSG00000140395.4553.24430844.84340-0.610805.824104.88490HepG2RPLP0
WDR61ENSG00000140395.4474.32110643.26490-0.439501.915701.35210HepG2SF3A3
WDR61ENSG00000140395.4670.53710906.53640-0.435004.460203.73670HepG2SF3B4
WDR61ENSG00000140395.4783.313901044.36080-0.415005.440004.51220HepG2SLBP
WDR61ENSG00000140395.4882.630401201.62620-0.445106.082405.41880HepG2SRFBP1
WDR61ENSG00000140395.4543.75530770.53570-0.502905.714704.77190HepG2SRSF7
WDR61ENSG00000140395.4547.17400769.73720-0.492405.645804.90600HepG2SRSF9
WDR61ENSG00000140395.4270.43180413.48210-0.612603.436702.19690HepG2STIP1
WDR61ENSG00000140395.4950.197701222.99620-0.364104.630003.86270HepG2SUCLG1
WDR61ENSG00000140395.4543.34670709.90650-0.385801.970601.38530HepG2SUPV3L1
WDR61ENSG00000140395.4615.14010781.48160-0.345302.550801.74540HepG2TIA1
WDR61ENSG00000140395.4488.61880662.76640-0.439803.662103.10420HepG2TIAL1
WDR61ENSG00000140395.4865.570601064.07970-0.297902.083201.33440HepG2TUFM
WDR61ENSG00000140395.4378.16720569.42550-0.590503.854703.11740HepG2U2AF1
WDR61ENSG00000140395.4274.71220514.16020-0.904302.332701.43490HepG2U2AF2
WDR61ENSG00000140395.4825.679101126.33520-0.448003.019302.14610HepG2UBE2L3
WDR61ENSG00000140395.4547.72380419.355000.385202.061901.40630HepG2UCHL5
WDR61ENSG00000140395.41475.066301288.975000.194501.779201.30370K562AGGF1
WDR61ENSG00000140395.41527.340602498.79520-0.7102010.266209.24600K562AQR
WDR61ENSG00000140395.41360.396901676.00000-0.301003.057901.66170K562BCCIP
WDR61ENSG00000140395.41219.752001619.52610-0.409006.256204.78830K562BCLAF1
WDR61ENSG00000140395.4852.446901196.40480-0.489003.766502.05490K562BUD13
WDR61ENSG00000140395.4453.73150637.19590-0.489903.548602.32340K562CCAR1
WDR61ENSG00000140395.4995.923801228.65160-0.303002.836201.76700K562CSTF2
WDR61ENSG00000140395.41684.448501443.245100.222902.098601.34740K562DKC1
WDR61ENSG00000140395.4822.069701322.90810-0.686407.739106.14340K562EFTUD2
WDR61ENSG00000140395.41294.202901871.51860-0.532109.627908.41040K562EIF2S2
WDR61ENSG00000140395.41066.696701416.59400-0.409302.536501.55050K562EIF3D
WDR61ENSG00000140395.4853.694401113.93170-0.383903.152202.27860K562EIF4A3
WDR61ENSG00000140395.4755.058101078.20910-0.514005.490003.66570K562EXOSC5
WDR61ENSG00000140395.4985.701501290.47390-0.388702.168901.55370K562G3BP2
WDR61ENSG00000140395.4967.897901326.28740-0.454503.397101.79840K562GEMIN5
WDR61ENSG00000140395.41396.698201687.93910-0.273202.339001.35680K562HNRNPA1
WDR61ENSG00000140395.4804.090501111.64110-0.467304.455903.71670K562HNRNPC
WDR61ENSG00000140395.4774.799401134.59430-0.550306.270303.45240K562HNRNPH1
WDR61ENSG00000140395.41581.157001015.627500.638506.422804.91580K562HNRNPM
WDR61ENSG00000140395.41081.688201869.21660-0.7891017.7421015.59530K562HNRNPU
WDR61ENSG00000140395.41142.320001597.26110-0.483605.464004.26920K562MAGOH
WDR61ENSG00000140395.41120.705401467.97460-0.389406.924905.81900K562NSUN2
WDR61ENSG00000140395.4988.998701421.16780-0.523005.838104.40320K562PCBP2
WDR61ENSG00000140395.4988.536801371.47970-0.472403.748302.77910K562PCBP3
WDR61ENSG00000140395.41955.901203081.75710-0.655909.910008.34540K562PUF60
WDR61ENSG00000140395.41699.206501330.113200.353202.674902.13810K562PUS1
WDR61ENSG00000140395.41818.659002365.19700-0.379104.193702.21780K562RBM17
WDR61ENSG00000140395.41054.881601488.03090-0.496305.172903.98310K562RBM22
WDR61ENSG00000140395.4692.40610909.30270-0.393103.126202.06500K562RCC2
WDR61ENSG00000140395.4724.43600937.28360-0.371602.780501.69520K562SAFB
WDR61ENSG00000140395.4698.95410969.07270-0.471403.784402.07550K562SDAD1
WDR61ENSG00000140395.41109.055801448.58800-0.385304.944503.88170K562SF3A3
WDR61ENSG00000140395.4432.15820699.78930-0.695403.411002.32830K562SF3B1
WDR61ENSG00000140395.4768.708701341.92010-0.8038014.5566012.47810K562SF3B4
WDR61ENSG00000140395.4526.22460701.85890-0.415502.891201.60070K562SLBP
WDR61ENSG00000140395.41145.929401521.31880-0.408804.330503.45000K562SRSF1
WDR61ENSG00000140395.4928.298401136.25360-0.291602.801001.62700K562SRSF7
WDR61ENSG00000140395.4883.709001197.44820-0.438304.645302.64690K562SRSF9
WDR61ENSG00000140395.4654.759001246.62900-0.9290011.190909.10920K562SUPV3L1
WDR61ENSG00000140395.4949.878401539.67520-0.696808.730207.38130K562TARDBP
WDR61ENSG00000140395.41123.360201485.19020-0.402804.201603.16200K562TIA1
WDR61ENSG00000140395.4632.31830958.65740-0.600405.139503.82670K562TIAL1
WDR61ENSG00000140395.4782.638401018.39380-0.379902.982601.99270K562TRIM56
WDR61ENSG00000140395.41494.886501805.07490-0.272003.521802.08110K562TROVE2
WDR61ENSG00000140395.41049.608601291.93860-0.299702.579401.80260K562U2AF2
WDR61ENSG00000140395.4937.663001319.29930-0.492604.172102.89680K562UCHL5
WDR61ENSG00000140395.41033.190401331.86600-0.366303.377702.41410K562WDR3
WDR61ENSG00000140395.4980.303701343.25160-0.454403.650802.19250K562XRN2
WDR61ENSG00000140395.41868.502502815.06510-0.591308.637306.98610K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WDR61 is not available on ENCORE database.





18 RBPs can affect the splicing of WDR61 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWDR61ENSG00000140395.4chr15-785855087858561478582292785824417858728778587315-0.240000.000000.00000excludedK562SRSF1
SEWDR61ENSG00000140395.4chr15-785855087858561478585180785852277858728778587315-0.087000.000000.00001excludedK562SF3B4
SEWDR61ENSG00000140395.4chr15-785855087858561478585180785852277858728778587315-0.073000.000000.00043excludedK562PRPF8
SEWDR61ENSG00000140395.4chr15-785855087858561478584957785852277858728778587315-0.086000.000000.00000excludedK562AQR
SEWDR61ENSG00000140395.4chr15-785849577858522778582292785824417858728778587315-0.060000.000010.00020excludedK562PUS1
SEWDR61ENSG00000140395.4chr15-785849577858522778582292785824417858728778587315-0.197000.000000.00002excludedK562EFTUD2
SEWDR61ENSG00000140395.4chr15-785855087858561478582292785824417858728778587315-0.093000.000000.00002excludedK562TARDBP
SEWDR61ENSG00000140395.4chr15-7858118478581259785806807858072478581960785820540.060000.001710.06069includedK562SF3B1
SEWDR61ENSG00000140395.4chr15-785849577858513078582292785824417858728778587315-0.111000.000010.00089excludedK562PTBP1
SEWDR61ENSG00000140395.4chr15-785872877858731578585508785856147858801678588067-0.053000.000000.00002excludedK562HNRNPC
A3SSWDR61ENSG00000140395.4chr15-7858495778585227785849577858513078585508785856140.108000.000250.02450longerHepG2SF3A3
A3SSWDR61ENSG00000140395.4chr15-7857760278578066785776027857768178578382785784750.109000.000070.02390longerHepG2HNRNPU
A3SSWDR61ENSG00000140395.4chr15-7857760278578066785776027857768178578382785784750.105000.000000.00000longerK562HNRNPU
A3SSWDR61ENSG00000140395.4chr15-7858495778585227785849577858513078585508785856140.055000.000670.07089longerK562EFTUD2
A3SSWDR61ENSG00000140395.4chr15-7857760278578066785776027857768178578382785784750.078000.000030.01473longerK562SUPV3L1
A3SSWDR61ENSG00000140395.4chr15-7858495778585227785849577858513078585508785856760.078000.000000.00001longerK562U2AF2
A3SSWDR61ENSG00000140395.4chr15-7857760278578066785776027857768178578382785784750.072000.000010.01343longerK562NSUN2
A3SSWDR61ENSG00000140395.4chr15-7858495778585227785849577858513078585508785856760.170000.000000.00000longerK562SF3B4
A3SSWDR61ENSG00000140395.4chr15-7858495778585227785849577858513078585508785856140.140000.000000.00000longerK562AQR
A3SSWDR61ENSG00000140395.4chr15-7857760278578066785776027857768178578382785784750.092000.000000.00000longerK562AQR
A3SSWDR61ENSG00000140395.4chr15-7858495778585227785849577858513078585508785856140.051000.000010.00303longerK562TARDBP
MXEWDR61ENSG00000140395.4chr15-78584957785852277858550878585614785822927858244178587287785873150.074000.011550.096901includedK562DROSHA
MXEWDR61ENSG00000140395.4chr15-78584957785852277858728778587315785822927858244178588016785880670.096000.000770.015251includedK562DROSHA
MXEWDR61ENSG00000140395.4chr15-78582292785824417858495778585227785819607858205478585508785856140.093000.000000.000001includedK562AQR
MXEWDR61ENSG00000140395.4chr15-78584957785851307858518078585227785835317858375578585508785856140.115000.000000.000001includedK562AQR
MXEWDR61ENSG00000140395.4chr15-7858229278582441785849577858513078581960785820547858550878585614-0.097000.005200.037172includedK562AQR
MXEWDR61ENSG00000140395.4chr15-78584957785851307858518078585227785822927858239078585508785856140.095000.000050.001291includedK562U2AF2
MXEWDR61ENSG00000140395.4chr15-7858550878585676785872877858731578584957785852277858801678588067-0.057000.001720.024562includedK562U2AF2
MXEWDR61ENSG00000140395.4chr15-78585508785856147858728778587315785849577858513078588016785881350.126000.000170.042501includedK562PUM2
MXEWDR61ENSG00000140395.4chr15-78582292785824417858495778585227785819607858205478585508785856140.131000.000000.000231includedK562HNRNPC
MXEWDR61ENSG00000140395.4chr15-78584957785851307858518078585227785827657858289878585508785856140.134000.001430.026971includedK562HNRNPC
MXEWDR61ENSG00000140395.4chr15-78582292785824417858495778585227785819607858205478585508785856140.124000.000000.000001includedK562SF3B4
MXEWDR61ENSG00000140395.4chr15-78584957785851307858518078585227785822927858244178587287785873150.066000.000020.000811includedK562SF3B4
MXEWDR61ENSG00000140395.4chr15-78584957785851307858518078585227785822927858244178585508785856140.088000.000000.000001includedK562SF3B4
MXEWDR61ENSG00000140395.4chr15-7858518078585227785855087858561478582292785824417858728778587315-0.051000.000010.000402includedK562SF3B4
MXEWDR61ENSG00000140395.4chr15-7858229278582441785849577858513078581960785820547858550878585614-0.130000.002260.036122includedK562SF3B4
MXEWDR61ENSG00000140395.4chr15-7858229278582441785849577858513078581960785820547858550878585614-0.116000.004340.072952includedK562SUPV3L1
MXEWDR61ENSG00000140395.4chr15-78584957785852277858550878585614785822927858244178587287785873150.095000.001770.034031includedK562HNRNPUL1
MXEWDR61ENSG00000140395.4chr15-78584957785852277858728778587315785822927858244178588016785880670.103000.000250.009341includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WDR61 is not avaliable on ENCORE database.