TOP3B

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TOP3B	ENSG00000100038.19	8.06	20.13	14.09	ENCSR000AEF
HepG2	TOP3B	ENSG00000100038.19	42.20	29.07	35.64	ENCSR985KAT
K562	TOP3B	ENSG00000100038.19	89.04	75.27	82.16	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TOP3B is not avaliable on ENCORE database.

Proteins bound to RNA

TOP3B RNA is bound by 32 proteins.

eCLIP assay for TOP3B is not avaliable on ENCORE database.

32 proteins are bound to TOP3B RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	22322013	22322054	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.70924	6.28735	K562	DDX24
chr22	22312813	22312868	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.49049	9.54841	HepG2	PRPF8
chr22	22318534	22318597	-	3'-UTR,CDS,intron-Distal	3.33750	8.07998	HepG2	PPIG
chr22	22314014	22314105	-	3'-UTR,CDS,intron-Distal	3.17851	3.90804	HepG2	GRWD1
chr22	22313911	22313975	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90092	13.31158	K562	RBM15
chr22	22319656	22319699	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.36056	7.15565	HepG2	BUD13
chr22	22313616	22313655	-	3'-UTR,intron-Distal,intron-Proximal	6.58855	86.18667	K562	SF3B4
chr22	22321972	22322009	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.20705	3.76830	K562	MTPAP
chr22	22319717	22319748	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.19550	6.47139	HepG2	PPIG
chr22	22319724	22319747	-	3'-UTR,CDS,intron-Distal	3.16312	4.01457	K562	MTPAP
chr22	22312818	22312863	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.22271	54.47238	K562	AQR
chr22	22319653	22319689	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.08950	3.07152	HepG2	HLTF
chr22	22322013	22322056	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.10254	5.35703	HepG2	BCLAF1
chr22	22319656	22319697	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.10048	27.00340	K562	DDX24
chr22	22316854	22316907	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.37192	6.03548	K562	RBM15
chr22	22318652	22318691	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.84248	10.73503	K562	BUD13
chr22	22313609	22313660	-	3'-UTR,intron-Distal,intron-Proximal	3.54612	6.49817	K562	RBM15
chr22	22312287	22312324	-	3'-UTR,intron-Distal	3.50705	5.62662	K562	BUD13
chr22	22316918	22316969	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.03650	7.52714	K562	ZNF622
chr22	22317119	22317171	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.58860	15.03706	K562	DDX24
chr22	22318537	22318595	-	3'-UTR,CDS,intron-Distal	3.33178	7.63960	K562	UCHL5
chr22	22312541	22312645	-	3'-UTR,intron-Distal	3.35591	4.11060	HepG2	SRSF1
chr22	22318641	22318688	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.09952	12.13768	K562	UCHL5
chr22	22319718	22319748	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.90021	26.12573	K562	DDX24
chr22	22312794	22312818	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.18827	11.58353	K562	AQR
chr22	22312824	22312861	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.00395	3.21309	HepG2	GRWD1
chr22	22312835	22312875	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.23524	11.81571	K562	PRPF8
chr22	22313910	22313965	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37375	14.20780	K562	AQR
chr22	22313584	22313656	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.71917	29.65148	HepG2	SF3B4
chr22	22323044	22323099	-	3'-UTR,CDS,intron-Distal	4.13602	13.15863	K562	DDX24
chr22	22322992	22323044	-	3'-UTR,CDS,intron-Distal	4.39107	16.52253	K562	DDX24
chr22	22317118	22317162	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.69385	5.38772	K562	RBM15
chr22	22312161	22312220	-	3'-UTR,intron-Distal	3.03751	5.20820	K562	FUS
chr22	22316801	22316847	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.79832	17.66444	K562	DDX24
chr22	22322990	22323028	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.41182	4.85828	HepG2	BCLAF1
chr22	22321973	22322013	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.37282	11.55000	HepG2	BCLAF1
chr22	22313021	22313063	-	3'-UTR,CDS,intron-Distal	3.51593	6.54857	HepG2	PPIG
chr22	22321974	22321983	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.21246	18.69631	K562	DDX24
chr22	22330083	22330102	-	3'-UTR,5'-UTR,intron-Distal	3.85188	12.45717	K562	ZNF622
chr22	22318661	22318687	-	3'-UTR,CDS,intron-Distal	5.57326	17.22040	K562	DDX24
chr22	22316802	22316915	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.55112	7.15529	HepG2	PPIG
chr22	22313574	22313637	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48693	11.37716	K562	SMNDC1
chr22	22312788	22312835	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.88859	14.40077	K562	PRPF8
chr22	22318540	22318638	-	3'-UTR,CDS,intron-Distal	3.11813	15.90974	K562	ZNF622
chr22	22313507	22313563	-	3'-UTR,CDS,intron-Distal	3.62382	6.93667	HepG2	PPIG
chr22	22319716	22319748	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.78139	9.12548	HepG2	BCLAF1
chr22	22312155	22312214	-	3'-UTR,intron-Distal	3.55064	7.32655	K562	UCHL5
chr22	22330083	22330106	-	3'-UTR,5'-UTR,intron-Distal	4.20540	11.16705	K562	UCHL5
chr22	22330135	22330180	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.19500	11.31595	K562	ZNF622
chr22	22318384	22318432	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.96454	10.08262	K562	AQR
chr22	22312283	22312334	-	3'-UTR,intron-Distal	5.32468	15.35006	K562	SF3B4
chr22	22316907	22316922	-	3'-UTR,5'-UTR,CDS,intron-Distal	4.06344	5.71420	K562	RBM15
chr22	22318532	22318589	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.61728	21.29962	K562	DDX24
chr22	22313958	22313970	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.31466	6.75313	K562	DDX24
chr22	22319654	22319712	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.16867	5.33915	HepG2	SUB1
chr22	22313608	22313653	-	3'-UTR,intron-Distal,intron-Proximal	4.91945	6.27794	HepG2	SF3A3
chr22	22316915	22316952	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.91386	5.80295	HepG2	PPIG
chr22	22321974	22322002	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.64458	10.84701	K562	UCHL5
chr22	22330106	22330131	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.95683	13.36249	K562	UCHL5
chr22	22316847	22316940	-	3'-UTR,5'-UTR,CDS,intron-Distal	4.40883	32.55436	K562	DDX24
chr22	22313912	22313974	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48720	12.96134	K562	PRPF8
chr22	22319656	22319678	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.19886	5.79432	HepG2	BCLAF1
chr22	22330081	22330136	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.11110	3.52645	HepG2	NCBP2
chr22	22314721	22314821	-	3'-UTR,CDS,intron-Distal	4.04824	25.50801	K562	DDX24
chr22	22313591	22313600	-	3'-UTR,CDS,intron-Distal	4.38441	4.50440	HepG2	PPIG
chr22	22319656	22319698	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.81961	9.69701	K562	BUD13
chr22	22330149	22330239	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.12125	11.75330	K562	SF3B4
chr22	22321983	22322013	-	3'-UTR,CDS,intron-Distal	5.53622	21.63267	K562	DDX24
chr22	22319690	22319716	-	3'-UTR,CDS,intron-Distal	3.41095	8.15127	K562	ZNF622
chr22	22330143	22330175	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.72304	10.51333	K562	DDX24
chr22	22318606	22318689	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.12419	7.50227	HepG2	BCLAF1
chr22	22319622	22319697	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98755	7.29769	HepG2	PRPF8
chr22	22330102	22330135	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.51260	14.90066	K562	ZNF622
chr22	22313637	22313657	-	3'-UTR,intron-Distal,intron-Proximal	3.92548	8.98257	K562	SMNDC1
chr22	22312553	22312605	-	3'-UTR,intron-Distal	3.28081	4.25887	K562	SRSF1
chr22	22316922	22316958	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.02652	4.53546	K562	BUD13
chr22	22330072	22330167	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.35883	11.03831	K562	GRWD1
chr22	22319656	22319695	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.62776	13.10593	K562	UCHL5
chr22	22322076	22322088	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.58355	3.57857	HepG2	BCLAF1
chr22	22312602	22312662	-	3'-UTR,intron-Distal	3.42859	3.63681	K562	RBM15
chr22	22313563	22313582	-	3'-UTR,CDS,intron-Distal	3.56810	7.64107	HepG2	PPIG
chr22	22313534	22313573	-	3'-UTR,CDS,intron-Distal	3.32958	14.24163	K562	SF3B4
chr22	22314069	22314106	-	3'-UTR,CDS,intron-Distal	3.56581	6.13978	HepG2	PPIG
chr22	22321973	22322001	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.27840	5.47500	HepG2	PPIG
chr22	22330080	22330130	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.38845	7.66871	HepG2	BCLAF1
chr22	22312911	22312977	-	3'-UTR,CDS,intron-Distal	3.36632	9.91328	HepG2	PPIG
chr22	22314062	22314108	-	3'-UTR,CDS,intron-Distal	3.79904	15.71799	K562	DDX24
chr22	22313907	22313965	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.78899	8.78144	HepG2	PRPF8
chr22	22312161	22312223	-	3'-UTR,intron-Distal	3.24970	3.65531	HepG2	LSM11
chr22	22318630	22318687	-	3'-UTR,CDS,intron-Distal	3.31934	4.27261	HepG2	GRWD1
chr22	22319655	22319698	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.13608	15.06908	HepG2	PPIG
chr22	22319717	22319747	-	3'-UTR,CDS,intron-Distal	3.42071	5.19978	HepG2	BUD13
chr22	22313573	22313602	-	3'-UTR,CDS,intron-Distal	3.94828	23.22349	K562	SF3B4
chr22	22319702	22319748	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.01466	14.25191	K562	UCHL5
chr22	22313602	22313616	-	3'-UTR,CDS,intron-Distal,intron-Proximal	7.16411	72.29847	K562	SF3B4
chr22	22318389	22318398	-	3'-UTR,CDS,intron-Distal	3.43993	3.86355	HepG2	PPIG
chr22	22326983	22326999	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.38973	9.56105	HepG2	PPIG
chr22	22328726	22328781	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.60886	6.08299	HepG2	PPIG
chr22	22325378	22325432	-	5'-UTR,CDS,intron-Distal	3.77718	13.78939	K562	DDX24
chr22	22326941	22326992	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.46581	5.90285	HepG2	PRPF8
chr22	22337086	22337172	-	5'-UTR,intron-Distal,intron-Proximal	4.40117	9.08333	HepG2	PRPF8
chr22	22330017	22330061	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.42493	3.99124	HepG2	PPIG
chr22	22337115	22337142	-	5'-UTR,intron-Distal	3.28262	8.19632	K562	PRPF8
chr22	22328833	22328907	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.64068	16.70946	K562	SF3B4
chr22	22328850	22328886	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.30045	7.81430	K562	AQR
chr22	22337001	22337052	-	5'-UTR,intron-Distal	3.77096	3.34231	K562	RBM15
chr22	22327029	22327086	-	5'-UTR,CDS,intron-Distal	4.35044	18.46830	K562	DDX24
chr22	22326982	22327003	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.54514	4.56058	HepG2	BCLAF1
chr22	22324691	22324732	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.58872	6.13978	HepG2	PPIG
chr22	22324656	22324687	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.20723	4.77136	HepG2	PPIG
chr22	22337124	22337177	-	5'-UTR,intron-Distal,intron-Proximal	4.16317	8.16459	K562	DDX3X
chr22	22336974	22337052	-	5'-UTR,intron-Distal	5.65329	11.04738	K562	HNRNPM
chr22	22327068	22327089	-	5'-UTR,CDS,intron-Distal	4.19275	5.24452	HepG2	PPIG
chr22	22337084	22337173	-	5'-UTR,intron-Distal,intron-Proximal	3.04863	6.31617	HepG2	SRSF1
chr22	22337131	22337175	-	5'-UTR,intron-Distal,intron-Proximal	3.64968	11.60048	K562	ZNF622
chr22	22328650	22328749	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.26410	11.71162	K562	PRPF8
chr22	22337085	22337115	-	5'-UTR,intron-Distal	4.33251	8.82110	K562	PRPF8
chr22	22324653	22324776	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.55048	22.35457	K562	DDX24
chr22	22328728	22328754	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.25999	9.83658	K562	DDX24
chr22	22336881	22336952	-	5'-UTR,intron-Distal,intron-Proximal	4.61427	4.02846	K562	HNRNPM
chr22	22324647	22324720	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.29702	3.08145	HepG2	HLTF
chr22	22326982	22327022	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.64378	12.57060	K562	DDX24
chr22	22337090	22337175	-	5'-UTR,intron-Distal,intron-Proximal	3.85922	9.74851	K562	SRSF1
chr22	22326304	22326325	-	CDS,intron-Distal,intron-Proximal	3.73668	10.17919	HepG2	PPIG
chr22	22326212	22326285	-	CDS,intron-Distal,intron-Proximal	4.08711	8.70001	HepG2	PRPF8
chr22	22326307	22326323	-	CDS,intron-Distal	3.68966	10.17838	K562	ZNF622
chr22	22326308	22326324	-	CDS,intron-Distal,intron-Proximal	3.74499	17.01191	K562	DDX24
chr22	22326245	22326317	-	CDS,intron-Distal,intron-Proximal	3.95579	13.23699	HepG2	BCLAF1
chr22	22326277	22326304	-	CDS,intron-Distal	3.67998	16.50987	HepG2	PPIG
chr22	22326286	22326328	-	CDS,intron-Distal,intron-Proximal	3.58167	4.77481	HepG2	BUD13
chr22	22326317	22326324	-	CDS,intron-Distal,intron-Proximal	4.11184	4.46864	HepG2	BCLAF1
chr22	22326255	22326323	-	CDS,intron-Distal,intron-Proximal	3.35688	6.59473	HepG2	GRWD1
chr22	22326248	22326291	-	CDS,intron-Distal,intron-Proximal	3.48471	12.50248	K562	UCHL5
chr22	22326247	22326308	-	CDS,intron-Distal,intron-Proximal	4.48064	45.56133	K562	DDX24
chr22	22326248	22326277	-	CDS,intron-Distal,intron-Proximal	3.07572	9.46124	HepG2	PPIG
chr22	22333580	22333644	-	intron-Distal	4.48553	5.33511	HepG2	HNRNPK
chr22	22333244	22333296	-	intron-Distal	4.03948	8.12478	K562	HNRNPK
chr22	22326164	22326220	-	intron-Distal,intron-Proximal	4.09043	9.06579	K562	RBM22
chr22	22326173	22326237	-	intron-Distal,intron-Proximal	3.66357	18.05765	K562	AQR
chr22	22333091	22333169	-	intron-Distal	4.23890	12.02203	K562	HNRNPK
chr22	22330916	22331005	-	intron-Distal	3.41297	5.10441	K562	HNRNPM
chr22	22326961	22326984	-	intron-Distal,intron-Proximal	3.56752	12.86452	K562	AQR
chr22	22321964	22321975	-	intron-Distal,intron-Proximal	4.03016	9.10472	K562	AQR
chr22	22332334	22332454	-	intron-Distal	5.71879	12.48233	HepG2	HNRNPK
chr22	22332368	22332407	-	intron-Distal	5.55393	12.97263	K562	HNRNPK
chr22	22329878	22329933	-	intron-Distal,intron-Proximal	3.85944	3.19904	K562	TIA1
chr22	22333616	22333756	-	intron-Distal	3.56511	8.38276	K562	RBFOX2
chr22	22333446	22333497	-	intron-Distal	5.06851	16.50987	K562	HNRNPK
chr22	22333497	22333558	-	intron-Distal	4.47009	4.87774	HepG2	HNRNPK
chr22	22321899	22321942	-	intron-Distal,intron-Proximal	4.80993	5.00814	HepG2	RBM22
chr22	22318271	22318295	-	intron-Distal,intron-Proximal	4.36856	11.31344	K562	AQR
chr22	22332278	22332368	-	intron-Distal	3.89159	15.30430	K562	HNRNPK
chr22	22314645	22314691	-	intron-Distal,intron-Proximal	4.68252	8.30573	K562	AQR
chr22	22321845	22321872	-	intron-Distal	3.96939	5.99968	K562	PRPF8
chr22	22318493	22318526	-	intron-Distal,intron-Proximal	5.31979	6.44303	K562	AQR
chr22	22333500	22333566	-	intron-Distal	3.17099	3.25495	HepG2	DDX59
chr22	22321896	22321934	-	intron-Distal,intron-Proximal	4.32166	6.71940	K562	PRPF8
chr22	22326939	22326961	-	intron-Distal,intron-Proximal	4.71548	14.41880	K562	AQR
chr22	22333462	22333598	-	intron-Distal	4.91196	25.10654	HepG2	PCBP2
chr22	22332554	22332632	-	intron-Distal	5.44546	22.39419	K562	HNRNPK
chr22	22333598	22333675	-	intron-Distal	4.97730	12.47085	HepG2	PCBP2
chr22	22318444	22318449	-	intron-Distal,intron-Proximal	4.62363	4.09264	K562	AQR
chr22	22324946	22324993	-	intron-Distal	4.97248	3.59041	K562	DROSHA
chr22	22332899	22332973	-	intron-Distal	5.36601	20.91826	K562	HNRNPK
chr22	22325197	22325246	-	intron-Distal	4.12280	4.22415	K562	PTBP1
chr22	22332805	22332899	-	intron-Distal	6.60053	25.57210	K562	HNRNPK
chr22	22333610	22333705	-	intron-Distal	3.43194	4.51915	K562	MATR3
chr22	22332847	22332913	-	intron-Distal	3.80848	6.75634	HepG2	HNRNPK
chr22	22321900	22321929	-	intron-Distal,intron-Proximal	4.11860	5.47926	K562	AQR
chr22	22319625	22319648	-	intron-Distal,intron-Proximal	5.01285	4.48002	K562	AQR
chr22	22321879	22321944	-	intron-Distal,intron-Proximal	3.15763	5.76766	K562	RBM22
chr22	22332229	22332278	-	intron-Distal	3.67894	7.57836	K562	HNRNPK
chr22	22328677	22328729	-	intron-Distal,intron-Proximal	3.80436	12.26379	K562	AQR
chr22	22332296	22332387	-	intron-Distal	4.66258	6.94678	HepG2	DDX59
chr22	22332288	22332402	-	intron-Distal	3.77452	5.94320	HepG2	PCBP2
chr22	22332273	22332318	-	intron-Distal	4.38067	4.33022	HepG2	HNRNPK
chr22	22325933	22325972	-	intron-Distal	3.63850	6.70109	K562	PRPF8
chr22	22329972	22330012	-	intron-Distal,intron-Proximal	4.87488	5.69951	K562	AQR
chr22	22332913	22332967	-	intron-Distal	5.38945	10.87872	HepG2	HNRNPK
chr22	22332481	22332522	-	intron-Distal	4.26912	7.57201	K562	HNRNPK
chr22	22333388	22333560	-	intron-Distal	3.80376	4.83406	HepG2	QKI
chr22	22321929	22321964	-	intron-Distal,intron-Proximal	6.23482	12.10660	K562	AQR
chr22	22313466	22313501	-	intron-Distal,intron-Proximal	5.40432	6.04760	K562	AQR
chr22	22318222	22318271	-	intron-Distal,intron-Proximal	6.40432	17.53326	K562	AQR
chr22	22327099	22327149	-	intron-Distal,intron-Proximal	5.60439	8.42776	K562	SF3B4
chr22	22318708	22318726	-	intron-Distal,intron-Proximal	4.96943	4.90235	K562	SF3B4
chr22	22321632	22321720	-	intron-Distal	4.34165	4.08723	K562	HNRNPK
chr22	22332534	22332636	-	intron-Distal	5.74561	12.21867	HepG2	HNRNPK
chr22	22333497	22333634	-	intron-Distal	5.12243	31.92771	K562	HNRNPK
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TOP3B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TOP3B is not available on ENCORE database.
94 RBPs can affect the levels of TOP3B.

The Knockdown/knockout RNA-Seq assay for TOP3B is not available on ENCORE database.

94 RBPs can affect the gene expression of TOP3B :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TOP3B	ENSG00000100038.15	428.82470	616.24330	-0.52310	3.01210	1.89770	HepG2	AATF
TOP3B	ENSG00000100038.15	865.99160	1026.04660	-0.24470	2.29860	1.73480	HepG2	ACO1
TOP3B	ENSG00000100038.15	632.26760	1028.87430	-0.70250	5.43740	4.72080	HepG2	AKAP1
TOP3B	ENSG00000100038.15	777.16450	1030.93270	-0.40770	3.99500	3.08600	HepG2	AKAP8L
TOP3B	ENSG00000100038.15	455.73200	851.25350	-0.90140	9.94970	8.52170	HepG2	ASCC1
TOP3B	ENSG00000100038.15	1161.22620	1352.73540	-0.22020	1.96460	1.36920	HepG2	AUH
TOP3B	ENSG00000100038.15	1034.05180	615.37020	0.74870	2.19340	1.36190	HepG2	BCCIP
TOP3B	ENSG00000100038.15	475.07450	736.23330	-0.63200	6.47230	5.35580	HepG2	CALR
TOP3B	ENSG00000100038.15	570.70730	808.76670	-0.50300	3.68530	2.80200	HepG2	CIRBP
TOP3B	ENSG00000100038.15	828.15860	1025.90230	-0.30890	3.29200	2.57740	HepG2	CKAP4
TOP3B	ENSG00000100038.15	788.46930	1037.22290	-0.39560	4.23100	3.46720	HepG2	CELF1
TOP3B	ENSG00000100038.15	1310.05470	1115.21910	0.23220	2.52380	1.81060	HepG2	DAZAP1
TOP3B	ENSG00000100038.15	731.47580	948.98230	-0.37560	4.66120	3.61590	HepG2	DDX19B
TOP3B	ENSG00000100038.15	512.01120	679.16730	-0.40760	2.70970	2.03800	HepG2	DDX21
TOP3B	ENSG00000100038.15	573.03430	985.46860	-0.78220	8.00040	6.98580	HepG2	DDX3X
TOP3B	ENSG00000100038.15	1064.57460	1400.76870	-0.39590	3.38960	1.95340	HepG2	DDX47
TOP3B	ENSG00000100038.15	550.68630	954.72960	-0.79390	9.25480	7.53540	HepG2	DDX5
TOP3B	ENSG00000100038.15	1135.55520	846.80900	0.42320	2.55520	1.96070	HepG2	DDX6
TOP3B	ENSG00000100038.15	800.94630	981.66890	-0.29350	2.66430	1.99810	HepG2	DKC1
TOP3B	ENSG00000100038.15	805.11950	631.47600	0.35040	3.74740	3.01010	HepG2	DNAJC2
TOP3B	ENSG00000100038.15	647.51950	874.23510	-0.43310	2.99110	2.03500	HepG2	EEF2
TOP3B	ENSG00000100038.15	478.42200	728.72830	-0.60710	5.10390	3.59670	HepG2	EFTUD2
TOP3B	ENSG00000100038.15	646.76060	939.98040	-0.53940	5.79260	4.14380	HepG2	EIF2S2
TOP3B	ENSG00000100038.15	456.23030	709.63730	-0.63730	5.55720	4.30700	HepG2	EIF3D
TOP3B	ENSG00000100038.15	644.61300	1100.27540	-0.77140	14.11230	12.51110	HepG2	EIF4G1
TOP3B	ENSG00000100038.15	1240.89570	1553.13480	-0.32380	4.07230	3.36780	HepG2	ETF1
TOP3B	ENSG00000100038.15	621.86680	1002.70070	-0.68920	8.81010	7.33620	HepG2	EWSR1
TOP3B	ENSG00000100038.15	1169.78360	907.65130	0.36590	2.43310	1.78250	HepG2	FXR1
TOP3B	ENSG00000100038.15	489.40720	631.82650	-0.36850	2.10990	1.33220	HepG2	GEMIN5
TOP3B	ENSG00000100038.15	818.62690	1024.94250	-0.32430	2.30120	1.44000	HepG2	HNRNPA2B1
TOP3B	ENSG00000100038.15	471.37890	715.36970	-0.60180	3.90010	3.08770	HepG2	HNRNPC
TOP3B	ENSG00000100038.15	910.92530	748.20470	0.28380	2.81040	2.08730	HepG2	HNRNPF
TOP3B	ENSG00000100038.15	2130.53740	852.85450	1.32070	29.95060	27.91410	HepG2	HNRNPK
TOP3B	ENSG00000100038.15	761.99140	1015.86400	-0.41490	5.55950	4.63310	HepG2	HNRNPL
TOP3B	ENSG00000100038.15	654.03110	863.28030	-0.40050	3.38770	2.34430	HepG2	HNRNPM
TOP3B	ENSG00000100038.15	897.91390	736.77550	0.28530	2.25690	1.59990	HepG2	IGF2BP1
TOP3B	ENSG00000100038.15	517.34910	700.45500	-0.43720	3.17040	1.95560	HepG2	LARP7
TOP3B	ENSG00000100038.15	600.16290	912.98770	-0.60520	4.59270	3.79770	HepG2	MATR3
TOP3B	ENSG00000100038.15	450.06090	742.66640	-0.72260	4.25890	2.96660	HepG2	METAP2
TOP3B	ENSG00000100038.15	786.68450	1012.61030	-0.36420	3.04840	2.19930	HepG2	MSI2
TOP3B	ENSG00000100038.15	590.73590	934.44160	-0.66160	5.78420	4.88350	HepG2	NCBP2
TOP3B	ENSG00000100038.15	587.55170	831.94200	-0.50180	3.62130	2.80260	HepG2	PABPC4
TOP3B	ENSG00000100038.15	441.99380	586.86090	-0.40900	3.02290	1.73530	HepG2	PKM
TOP3B	ENSG00000100038.15	900.01960	633.82640	0.50580	3.36540	2.55890	HepG2	PPIL4
TOP3B	ENSG00000100038.15	614.44150	862.76580	-0.48970	5.39110	4.68100	HepG2	PTBP1
TOP3B	ENSG00000100038.15	1406.00060	1055.64610	0.41340	4.04680	3.34090	HepG2	PUF60
TOP3B	ENSG00000100038.15	932.96440	1120.63120	-0.26440	2.77150	2.17810	HepG2	PUM1
TOP3B	ENSG00000100038.15	567.43560	1045.10650	-0.88110	20.24790	18.85590	HepG2	PUS1
TOP3B	ENSG00000100038.15	265.78440	646.43190	-1.28220	6.18990	5.16090	HepG2	RAVER1
TOP3B	ENSG00000100038.15	963.70940	1200.02650	-0.31640	2.46870	1.65460	HepG2	RBM15
TOP3B	ENSG00000100038.15	932.59720	1298.13040	-0.47710	6.18690	5.48720	HepG2	RBM22
TOP3B	ENSG00000100038.15	886.07030	632.83510	0.48550	4.23970	3.47190	HepG2	SAFB2
TOP3B	ENSG00000100038.15	444.96270	693.00470	-0.63920	5.45980	4.15140	HepG2	SERBP1
TOP3B	ENSG00000100038.15	845.18740	1234.21740	-0.54630	3.49690	2.73500	HepG2	SF3A3
TOP3B	ENSG00000100038.15	1204.01540	898.20110	0.42260	5.47430	4.69080	HepG2	SF3B4
TOP3B	ENSG00000100038.15	1023.28030	1466.18560	-0.51890	9.98060	9.18920	HepG2	SRFBP1
TOP3B	ENSG00000100038.15	241.52140	937.54770	-1.95670	59.89490	58.33820	HepG2	SRSF1
TOP3B	ENSG00000100038.15	340.67710	607.54160	-0.83460	6.03460	4.50990	HepG2	SRSF3
TOP3B	ENSG00000100038.15	716.48150	1042.31620	-0.54080	7.63810	6.66670	HepG2	SRSF5
TOP3B	ENSG00000100038.15	629.90980	762.76240	-0.27610	2.18430	1.68200	HepG2	SRSF9
TOP3B	ENSG00000100038.15	868.98930	1272.98750	-0.55080	9.50680	8.66750	HepG2	SSB
TOP3B	ENSG00000100038.15	630.90550	844.84270	-0.42130	3.89370	2.79000	HepG2	SUPT6H
TOP3B	ENSG00000100038.15	656.56720	842.76040	-0.36020	2.98780	2.40850	HepG2	TAF15
TOP3B	ENSG00000100038.15	566.58880	690.39500	-0.28510	1.75390	1.33650	HepG2	TIAL1
TOP3B	ENSG00000100038.15	770.52890	1070.35680	-0.47420	3.69190	2.96990	HepG2	U2AF1
TOP3B	ENSG00000100038.15	647.93750	355.67540	0.86520	4.40950	3.44950	HepG2	UCHL5
TOP3B	ENSG00000100038.15	829.31410	1094.55940	-0.40040	5.24480	4.33200	HepG2	UPF1
TOP3B	ENSG00000100038.15	772.01880	1056.75830	-0.45290	5.92980	5.10810	HepG2	UTP3
TOP3B	ENSG00000100038.15	1023.21100	592.85770	0.78720	3.11830	2.34980	HepG2	XRN2
TOP3B	ENSG00000100038.15	581.09710	766.34600	-0.39920	2.71170	2.04610	HepG2	ZC3H8
TOP3B	ENSG00000100038.15	2391.99470	3206.62340	-0.42280	5.01870	3.36710	K562	AARS
TOP3B	ENSG00000100038.15	5640.72260	6977.25340	-0.30680	3.27130	1.92110	K562	APOBEC3C
TOP3B	ENSG00000100038.15	4081.19100	3341.69890	0.28830	4.91660	3.61830	K562	BCLAF1
TOP3B	ENSG00000100038.15	4228.52090	5966.44510	-0.49670	6.05830	3.86140	K562	DDX19B
TOP3B	ENSG00000100038.15	6691.84880	5747.00310	0.21950	3.06280	1.78580	K562	DDX21
TOP3B	ENSG00000100038.15	5015.56290	5600.11500	-0.15900	1.91300	1.35260	K562	DDX47
TOP3B	ENSG00000100038.15	3620.67090	2771.14570	0.38570	2.13420	1.33150	K562	EFTUD2
TOP3B	ENSG00000100038.15	3995.62430	4634.66900	-0.21400	2.63800	1.93250	K562	EIF2S2
TOP3B	ENSG00000100038.15	1837.57510	1532.16340	0.26210	2.54370	1.78010	K562	EIF3G
TOP3B	ENSG00000100038.15	4269.37680	3185.37700	0.42250	4.91890	3.82160	K562	EIF4A3
TOP3B	ENSG00000100038.15	6468.88510	7907.51220	-0.28970	5.19410	3.92530	K562	EIF4G2
TOP3B	ENSG00000100038.15	2262.16980	3046.90330	-0.42960	3.88430	2.52130	K562	FKBP4
TOP3B	ENSG00000100038.15	1738.54540	2611.32680	-0.58690	5.54140	4.32110	K562	FMR1
TOP3B	ENSG00000100038.15	424.41370	1464.73410	-1.78710	17.63490	15.44630	K562	G3BP2
TOP3B	ENSG00000100038.15	3046.50650	2449.83420	0.31440	2.96410	2.14260	K562	GPKOW
TOP3B	ENSG00000100038.15	6233.81250	4744.84820	0.39370	5.43390	3.94870	K562	HNRNPA1
TOP3B	ENSG00000100038.15	2547.35900	3398.08100	-0.41570	4.77180	2.87440	K562	LARP7
TOP3B	ENSG00000100038.15	6740.93170	8428.41630	-0.32230	3.57470	2.28980	K562	MSI2
TOP3B	ENSG00000100038.15	2306.07200	3180.93490	-0.46400	7.24030	5.28310	K562	NCBP2
TOP3B	ENSG00000100038.15	5917.05200	8649.96680	-0.54780	8.66680	6.08260	K562	NOL12
TOP3B	ENSG00000100038.15	5866.17480	5110.19640	0.19890	4.46890	3.54600	K562	NSUN2
TOP3B	ENSG00000100038.15	1531.66230	2367.89980	-0.62850	3.83510	3.06510	K562	PTBP1
TOP3B	ENSG00000100038.15	6868.79510	9177.90220	-0.41810	7.62390	5.77980	K562	PUM1
TOP3B	ENSG00000100038.15	7730.34040	8991.32930	-0.21800	3.25500	2.21440	K562	PUM2
TOP3B	ENSG00000100038.15	6300.15130	5042.10640	0.32130	2.25890	1.51610	K562	SF3A3
TOP3B	ENSG00000100038.15	2602.80450	1522.05170	0.77390	17.14970	14.86940	K562	SF3B4
TOP3B	ENSG00000100038.15	7513.04770	3806.26200	0.98090	5.62940	3.46110	K562	SFPQ
TOP3B	ENSG00000100038.15	984.67830	1406.91670	-0.51480	5.81200	3.29610	K562	SND1
TOP3B	ENSG00000100038.15	1588.75780	2321.53140	-0.54720	2.99090	2.25890	K562	SRSF1
TOP3B	ENSG00000100038.15	5936.45350	5128.48780	0.21100	2.69590	1.54820	K562	SRSF7
TOP3B	ENSG00000100038.15	1231.68950	1580.44660	-0.35970	4.32560	2.67650	K562	SSB
TOP3B	ENSG00000100038.15	3351.74720	4190.48730	-0.32220	4.06150	3.06200	K562	SYNCRIP
TOP3B	ENSG00000100038.15	3241.21710	2349.11010	0.46430	2.24460	1.60330	K562	TARDBP
TOP3B	ENSG00000100038.15	3018.05190	2266.09520	0.41330	2.38930	1.63580	K562	TIA1
TOP3B	ENSG00000100038.15	2883.10160	2224.73410	0.37390	2.41560	1.40940	K562	TRA2A
TOP3B	ENSG00000100038.15	3958.52430	3214.33920	0.30030	2.59710	1.68710	K562	TRIM56
TOP3B	ENSG00000100038.15	4899.09330	6505.95580	-0.40920	10.01290	7.58080	K562	TROVE2
TOP3B	ENSG00000100038.15	6219.62610	5418.43080	0.19890	2.91390	2.17640	K562	UPF1
TOP3B	ENSG00000100038.15	5453.52250	4636.41080	0.23410	2.12340	1.35800	K562	WDR3
TOP3B	ENSG00000100038.15	5017.68340	6414.29020	-0.35430	3.85000	2.80260	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TOP3B is not available on ENCORE database.

56 RBPs can affect the splicing of TOP3B :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TOP3B	ENSG00000100038.15	chr22	-	22336810	22336846			22330011	22330179	22337126	22337163	0.08500	0.00000	0.00001	included	K562	SRSF1
SE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778			22322990	22323147	22326248	22326323	-0.11000	0.00074	0.01632	excluded	K562	SRSF1
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22336810	22336846	-0.39100	0.00577	0.08469	excluded	K562	SRSF1
SE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147			22321974	22322088	22326248	22326323	-0.05600	0.00516	0.07594	excluded	K562	SF3B4
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.08800	0.00073	0.02963	included	K562	PRPF8
SE	TOP3B	ENSG00000100038.15	chr22	-	22336810	22336846			22330011	22330179	22337126	22337163	0.06500	0.00002	0.00572	included	K562	MATR3
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.18100	0.00033	0.05353	excluded	K562	MATR3
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.07500	0.00035	0.03595	included	K562	XRCC6
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.17400	0.00011	0.01454	excluded	K562	XRCC6
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.13700	0.00003	0.01827	excluded	K562	PUM1
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.19900	0.00004	0.01517	excluded	K562	PCBP1
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	0.27300	0.00016	0.00588	included	HepG2	HNRNPK
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.14500	0.00003	0.00159	included	HepG2	HNRNPK
SE	TOP3B	ENSG00000100038.15	chr22	-	22336810	22336846			22330011	22330179	22337126	22337163	0.09300	0.00130	0.08813	included	HepG2	TBRG4
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.12100	0.00025	0.00436	included	HepG2	U2AF2
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.40300	0.00019	0.00334	excluded	HepG2	U2AF2
SE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778			22322990	22323147	22326248	22326323	-0.07100	0.00199	0.02180	excluded	K562	AQR
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.13500	0.00000	0.00000	included	K562	FXR1
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.31400	0.00000	0.00000	excluded	K562	FXR1
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.17100	0.00013	0.01548	excluded	K562	SUPV3L1
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.25300	0.00000	0.00002	included	HepG2	SFPQ
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.20900	0.00019	0.06801	excluded	K562	KHSRP
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.12700	0.00026	0.05854	included	K562	GPKOW
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.06600	0.00006	0.01902	included	K562	LARP4
SE	TOP3B	ENSG00000100038.15	chr22	-	22336810	22336846			22330011	22330179	22337126	22337163	0.06700	0.00000	0.00320	included	K562	APOBEC3C
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.15500	0.00002	0.01070	excluded	K562	APOBEC3C
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22322990	22323147	22326248	22326323	0.18100	0.00157	0.07138	included	K562	EFTUD2
SE	TOP3B	ENSG00000100038.15	chr22	-	22336810	22336846			22330011	22330179	22337126	22337163	0.07500	0.00124	0.05977	included	K562	EFTUD2
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.16400	0.00064	0.04662	excluded	K562	HNRNPL
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.10200	0.00050	0.06395	included	HepG2	HNRNPUL1
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	-0.15900	0.00102	0.06883	excluded	HepG2	TIAL1
SE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778			22322990	22323147	22326248	22326323	-0.24600	0.00214	0.08505	excluded	HepG2	PCBP1
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.17400	0.00000	0.00039	excluded	K562	EIF4G2
SE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147			22321974	22322088	22326248	22326323	-0.09800	0.00004	0.01021	excluded	K562	SRSF7
SE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778			22322990	22323147	22326248	22326323	-0.11000	0.00045	0.05961	excluded	K562	RBM22
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.07800	0.00000	0.00000	included	K562	U2AF2
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	0.24600	0.00000	0.00000	included	K562	HNRNPU
SE	TOP3B	ENSG00000100038.15	chr22	-	22336810	22336846			22330011	22330179	22337126	22337163	0.05300	0.00139	0.04834	included	K562	HNRNPU
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.14600	0.00048	0.02278	included	K562	SF3B1
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.16400	0.00010	0.02055	excluded	K562	ZC3H8
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.08700	0.00000	0.00003	included	K562	HNRNPK
SE	TOP3B	ENSG00000100038.15	chr22	-	22326248	22326323			22322990	22323147	22326983	22327090	-0.06600	0.00140	0.05809	excluded	K562	HNRNPK
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	0.37100	0.00003	0.00251	included	HepG2	HNRNPU
SE	TOP3B	ENSG00000100038.15	chr22	-	22336810	22336846			22330011	22330179	22337126	22337163	0.11600	0.00002	0.01212	included	K562	SAFB
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.23300	0.00000	0.00180	excluded	K562	EIF3G
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.05500	0.00302	0.09161	included	K562	PTBP1
SE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433			22324581	22324778	22326248	22326323	-0.32300	0.00000	0.00000	excluded	K562	PTBP1
SE	TOP3B	ENSG00000100038.15	chr22	-	22330352	22330559			22330011	22330179	22337126	22337184	0.12600	0.00065	0.01344	included	K562	HNRNPC
SE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147			22321974	22322088	22326248	22326323	-0.07800	0.00419	0.06059	excluded	K562	HNRNPC
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22317118	22317392			22317118	22317265	22318294	22318400	-0.09000	0.00001	0.00546	shorter	K562	DROSHA
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22317118	22317392			22317118	22317265	22318294	22318400	0.07100	0.00004	0.03559	longer	K562	PCBP1
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22317118	22317392			22317118	22317265	22318294	22318400	-0.08900	0.00003	0.01331	shorter	K562	HNRNPUL1
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22314692	22314871			22314692	22314821	22316499	22316974	0.34000	0.00001	0.00007	longer	K562	AQR
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325528			22325351	22325433	22326248	22326351	0.08000	0.00096	0.00670	longer	K562	AQR
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22326248	22326479			22326248	22326323	22326983	22327090	0.05200	0.00000	0.00000	longer	K562	AQR
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22330011	22330234			22330011	22330179	22337126	22337213	0.05900	0.00004	0.00037	longer	K562	AQR
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22318294	22318450			22318294	22318400	22318532	22318687	0.06000	0.00000	0.00000	longer	K562	AQR
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22312554	22312713			22312554	22312661	22312863	22313065	-0.08000	0.00438	0.02576	shorter	K562	AQR
A3SS	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325528			22325351	22325433	22326248	22326323	0.21700	0.00000	0.00007	longer	K562	PTBP1
A5SS	TOP3B	ENSG00000100038.15	chr22	-	22316499	22316974			22316800	22316974	22314692	22314821	0.05800	0.00014	0.08640	longer	K562	UPF1
A5SS	TOP3B	ENSG00000100038.15	chr22	-	22316499	22316974			22316800	22316974	22314692	22314821	0.07500	0.00001	0.00882	longer	K562	NSUN2
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	-0.08000	0.00137	0.07780	excluded	HepG2	DDX6
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.37100	0.00009	0.01087	excluded	HepG2	HNRNPL
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	0.05600	0.00000	0.00080	included	K562	PPIL4
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	-0.09300	0.00246	0.09678	excluded	K562	PPIL4
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.10000	0.01670	0.08714	included	K562	PUS1
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.11600	0.00970	0.05467	included	K562	PUS1
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.24300	0.00000	0.00007	excluded	K562	HNRNPC
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.14300	0.00084	0.06308	included	K562	HNRNPU
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.30200	0.00008	0.02069	excluded	K562	IGF2BP2
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.38700	0.00000	0.00015	excluded	K562	SRSF1
RI	TOP3B	ENSG00000100038.15	chr22	-	22311398	22313065			22311398	22311967	22312863	22313065	-0.42100	0.00188	0.08686	excluded	HepG2	SUPV3L1
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.17700	0.00063	0.02846	excluded	K562	HNRNPUL1
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	-0.11300	0.00003	0.00269	excluded	K562	HNRNPUL1
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.23600	0.00014	0.01954	excluded	K562	UCHL5
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.11300	0.00624	0.06238	included	K562	AGGF1
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	0.08500	0.00092	0.01359	included	K562	PRPF8
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.09900	0.00536	0.05697	included	K562	PRPF8
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.25400	0.00272	0.07281	excluded	HepG2	MATR3
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.21700	0.00007	0.00342	included	HepG2	FTO
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.32200	0.00022	0.00376	included	HepG2	QKI
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.19000	0.00003	0.00072	included	HepG2	QKI
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	-0.15400	0.00009	0.00169	excluded	HepG2	QKI
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.27700	0.00001	0.00285	excluded	K562	XRN2
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.18800	0.00058	0.03326	included	K562	BUD13
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.12900	0.00274	0.02715	included	HepG2	TAF15
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.15100	0.00440	0.04161	included	HepG2	U2AF1
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.28400	0.00173	0.08719	excluded	K562	KHSRP
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.24600	0.00052	0.02653	excluded	K562	SUPV3L1
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	-0.09000	0.00340	0.05026	excluded	HepG2	G3BP1
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.23300	0.00101	0.06094	excluded	K562	EIF3G
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.16400	0.00651	0.08643	included	K562	U2AF1
RI	TOP3B	ENSG00000100038.15	chr22	-	22311398	22313065			22311398	22311967	22312863	22313065	-0.19200	0.00002	0.00470	excluded	K562	TROVE2
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	-0.09600	0.00001	0.00436	excluded	K562	TROVE2
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	0.06400	0.00018	0.02398	included	K562	XRCC6
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.20700	0.00077	0.06154	excluded	K562	XRCC6
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.57200	0.00004	0.00385	excluded	HepG2	HNRNPC
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.21700	0.00010	0.00212	included	HepG2	NCBP2
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	-0.09700	0.00066	0.06192	excluded	K562	ZC3H8
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.30400	0.00267	0.02106	included	HepG2	SF3B4
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.12100	0.00279	0.02184	included	HepG2	SF3B4
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	-0.10200	0.00671	0.04476	excluded	HepG2	SF3B4
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.38800	0.00083	0.01587	included	HepG2	SRSF9
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.22600	0.00222	0.02594	included	HepG2	HNRNPK
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.15800	0.00133	0.03087	included	HepG2	PTBP1
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	0.05800	0.00438	0.04172	included	K562	EFTUD2
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.11900	0.00039	0.00578	included	K562	EFTUD2
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	0.17800	0.00001	0.00010	included	K562	AQR
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	0.14400	0.00000	0.00000	included	K562	AQR
RI	TOP3B	ENSG00000100038.15	chr22	-	22313503	22314108			22313503	22313604	22313958	22314108	0.09100	0.00761	0.04231	included	K562	AQR
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.27800	0.00167	0.07271	excluded	HepG2	LARP4
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.24000	0.00161	0.05189	excluded	K562	TARDBP
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.30000	0.00011	0.01316	excluded	HepG2	SSB
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	0.11700	0.00004	0.00184	included	K562	PTBP1
RI	TOP3B	ENSG00000100038.15	chr22	-	22311402	22313065			22311402	22311967	22312863	22313065	-0.43000	0.00000	0.00002	excluded	K562	PTBP1
RI	TOP3B	ENSG00000100038.15	chr22	-	22316800	22317265			22316800	22316974	22317118	22317265	0.05500	0.00143	0.02455	included	K562	FXR1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433	22326248	22326323	22324581	22324778	22326983	22327090	0.09200	0.00135	0.04312	1included	K562	PTBP1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22325351	22325433	22322990	22323147	22326248	22326323	-0.16400	0.00000	0.00052	2included	K562	PTBP1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.11100	0.00118	0.03647	2included	K562	RBM15
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.16300	0.00028	0.00747	2included	K562	DROSHA
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326323	22322990	22323147	22326983	22327090	-0.13300	0.00035	0.01516	2included	K562	XRN2
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.11200	0.00160	0.05893	2included	K562	FXR1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326323	22322990	22323147	22326983	22327090	-0.13800	0.00008	0.00681	2included	K562	FXR1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326479	22322990	22323147	22326983	22327090	0.05500	0.00329	0.02534	1included	K562	AQR
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326351	22322990	22323147	22326983	22327090	0.05500	0.00329	0.02534	1included	K562	AQR
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326354	22322990	22323147	22326983	22327090	0.06000	0.00122	0.01083	1included	K562	AQR
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.10700	0.00124	0.01858	2included	K562	U2AF2
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.15400	0.00374	0.08880	2included	HepG2	SF3A3
MXE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433	22326248	22326323	22324581	22324778	22326983	22327090	-0.10400	0.00009	0.00462	2included	K562	EFTUD2
MXE	TOP3B	ENSG00000100038.15	chr22	-	22325351	22325433	22326248	22326351	22324581	22324778	22326983	22327090	-0.17400	0.00476	0.09887	2included	K562	EFTUD2
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326323	22322990	22323147	22326983	22327090	-0.10600	0.00244	0.06244	2included	K562	EFTUD2
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326351	22322990	22323147	22326983	22327090	-0.06600	0.00188	0.05296	2included	K562	EFTUD2
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.14200	0.00511	0.04896	2included	HepG2	SFPQ
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22324581	22324778	22321974	22322088	22326248	22326323	0.10900	0.00052	0.06514	1included	K562	PCBP1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.13400	0.00236	0.03704	2included	HepG2	HNRNPUL1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22325351	22325433	22322990	22323147	22326248	22326323	-0.10700	0.00033	0.00850	2included	K562	HNRNPC
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22324581	22324778	22321974	22322088	22326248	22326323	-0.14300	0.00000	0.00003	2included	K562	HNRNPU
MXE	TOP3B	ENSG00000100038.15	chr22	-	22321974	22322088	22324581	22324778	22319656	22319747	22326248	22326323	-0.15700	0.00000	0.00002	2included	K562	HNRNPU
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326323	22322990	22323147	22326983	22327090	-0.13200	0.00039	0.04671	2included	K562	EWSR1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326479	22321974	22322088	22326983	22327090	0.05700	0.00003	0.01256	1included	K562	SRSF7
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326354	22322990	22323147	22326983	22327090	0.07800	0.00055	0.03552	1included	K562	HNRNPK
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.10000	0.00736	0.09917	2included	K562	PRPF8
MXE	TOP3B	ENSG00000100038.15	chr22	-	22324581	22324778	22326248	22326323	22322990	22323147	22326983	22327090	-0.11800	0.00197	0.03838	2included	K562	PRPF8
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22324581	22324778	22321974	22322088	22326248	22326323	0.10600	0.00396	0.06897	1included	K562	SUPV3L1
MXE	TOP3B	ENSG00000100038.15	chr22	-	22322990	22323147	22326248	22326323	22321974	22322088	22326983	22327090	-0.15400	0.00148	0.03072	2included	K562	HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TOP3B

General Information

Functions

Localization

Domains (AlphaFold: TOP3B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TOP3B is not avaliable on ENCORE database.

32 proteins are bound to TOP3B RNA:

eCLIP assay for TOP3B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TOP3B is not available on ENCORE database.

94 RBPs can affect the gene expression of TOP3B :

The Knockdown/knockout RNA-Seq assay for TOP3B is not available on ENCORE database.

56 RBPs can affect the splicing of TOP3B :

The Knockdown/knockout RNA-Seq assay for TOP3B is not avaliable on ENCORE database.