RP11-669N7.2

General Information

Gene Name : RP11-669N7.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-669N7.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-669N7.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-669N7.2 RNA is bound by 5 proteins.

eCLIP assay for RP11-669N7.2 is not avaliable on ENCORE database.

5 proteins are bound to RP11-669N7.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	129596123	129596136	+	intron-Distal,intron-Proximal	4.84934	24.29733	K562	YBX3
chr12	129595961	129595975	+	intron-Distal,intron-Proximal	3.29022	6.00087	K562	YBX3
chr12	129595536	129595566	+	intron-Distal,intron-Proximal	3.19527	6.17629	K562	IGF2BP2
chr12	129596163	129596185	+	intron-Distal	3.40678	7.36929	K562	YBX3
chr12	129596136	129596143	+	intron-Distal,intron-Proximal	5.13368	34.58784	K562	YBX3
chr12	129596003	129596057	+	intron-Distal	3.32757	8.58142	K562	YBX3
chr12	129595667	129595683	+	intron-Distal	3.47241	8.07578	K562	YBX3
chr12	129596114	129596123	+	intron-Distal,intron-Proximal	5.28836	29.86680	K562	YBX3
chr12	129595643	129595659	+	intron-Distal	3.63462	9.13328	K562	YBX3
chr12	129595535	129595592	+	intron-Distal,intron-Proximal	3.37293	18.04370	K562	PABPC4
chr12	129595554	129595617	+	intron-Distal	3.79210	26.06833	K562	YBX3
chr12	129595615	129595676	+	intron-Distal	3.35730	3.90285	K562	IGF2BP1
chr12	129595537	129595616	+	intron-Distal,intron-Proximal	3.64784	8.02406	K562	PCBP1
chr12	129596143	129596151	+	intron-Distal,intron-Proximal	4.83707	33.56165	K562	YBX3
chr12	129596110	129596114	+	intron-Distal,intron-Proximal	4.43739	17.77047	K562	YBX3
chr12	129595592	129595683	+	intron-Distal	3.33692	24.12739	K562	PABPC4
chr12	129595619	129595643	+	intron-Distal	3.85796	11.47083	K562	YBX3
chr12	129596198	129596214	+	intron-Distal	3.84689	6.42513	K562	YBX3
chr12	129596151	129596161	+	intron-Distal,intron-Proximal	3.84149	12.34190	K562	YBX3
chr12	129595566	129595621	+	intron-Distal	3.08074	8.47775	K562	IGF2BP2
chr12	129597609	129597651	+	intron-Proximal	3.19003	5.45578	K562	PABPC4
chr12	129597612	129597680	+	intron-Proximal	3.75383	7.03308	K562	IGF2BP1
chr12	129597609	129597704	+	intron-Proximal	3.77327	25.16247	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-669N7.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-669N7.2 is not available on ENCORE database.
81 RBPs can affect the levels of RP11-669N7.2.

The Knockdown/knockout RNA-Seq assay for RP11-669N7.2 is not available on ENCORE database.

81 RBPs can affect the gene expression of RP11-669N7.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-669N7.2	ENSG00000249196.2	13.09750	1.16540	3.49030	2.02050	1.55800	HepG2	AKAP1
RP11-669N7.2	ENSG00000249196.2	9.76140	0.00000	99999.99990	2.51950	1.79110	HepG2	CNOT7
RP11-669N7.2	ENSG00000249196.2	8.70990	0.00000	99999.99990	2.47750	1.42280	HepG2	GRSF1
RP11-669N7.2	ENSG00000249196.2	11.98430	0.51650	4.53610	2.48430	1.54140	HepG2	SRSF3
RP11-669N7.2	ENSG00000249196.2	467.12790	966.61340	-1.04910	10.93160	8.60780	K562	AARS
RP11-669N7.2	ENSG00000249196.2	1810.66400	1345.19260	0.42860	7.11130	6.26370	K562	AGGF1
RP11-669N7.2	ENSG00000249196.2	1792.46260	1478.16340	0.27800	2.18030	1.31940	K562	AKAP8
RP11-669N7.2	ENSG00000249196.2	1929.76980	1399.73390	0.46320	4.79080	3.92370	K562	AKAP8L
RP11-669N7.2	ENSG00000249196.2	1183.60560	1542.45930	-0.38200	3.87810	2.37480	K562	APOBEC3C
RP11-669N7.2	ENSG00000249196.2	1953.40910	1334.28020	0.54980	6.08070	5.26880	K562	AQR
RP11-669N7.2	ENSG00000249196.2	2238.80050	1468.65780	0.60810	12.18770	10.08710	K562	ATP5C1
RP11-669N7.2	ENSG00000249196.2	874.25720	1071.53380	-0.29350	2.57660	1.32280	K562	BCCIP
RP11-669N7.2	ENSG00000249196.2	1260.02240	1035.44970	0.28310	2.90320	1.92120	K562	BCLAF1
RP11-669N7.2	ENSG00000249196.2	1901.24560	1316.98160	0.52960	4.62840	2.68470	K562	CKAP4
RP11-669N7.2	ENSG00000249196.2	2024.94400	1379.93430	0.55320	2.95840	1.85420	K562	CNOT7
RP11-669N7.2	ENSG00000249196.2	1601.17310	1263.23420	0.34190	4.03040	2.68360	K562	CPEB4
RP11-669N7.2	ENSG00000249196.2	1718.65840	1122.79000	0.61410	9.02070	7.58490	K562	CPSF6
RP11-669N7.2	ENSG00000249196.2	1040.33930	785.54280	0.40520	4.03220	2.72660	K562	CSTF2
RP11-669N7.2	ENSG00000249196.2	732.86560	907.96210	-0.30910	2.83600	1.49960	K562	DDX27
RP11-669N7.2	ENSG00000249196.2	1463.06440	1195.86900	0.29080	2.26970	1.33240	K562	DDX3X
RP11-669N7.2	ENSG00000249196.2	669.13410	1307.29180	-0.96620	24.95270	23.18650	K562	DDX47
RP11-669N7.2	ENSG00000249196.2	1982.17490	1506.21390	0.39610	5.85430	4.51780	K562	DKC1
RP11-669N7.2	ENSG00000249196.2	1557.81580	1313.64220	0.24590	2.64750	1.47200	K562	EIF2S1
RP11-669N7.2	ENSG00000249196.2	419.72400	677.54980	-0.69090	3.12580	2.28170	K562	EIF3G
RP11-669N7.2	ENSG00000249196.2	1362.74340	1125.19930	0.27620	2.63500	1.51980	K562	EIF4B
RP11-669N7.2	ENSG00000249196.2	1513.04150	1210.65030	0.32160	2.87140	1.57730	K562	EXOSC5
RP11-669N7.2	ENSG00000249196.2	1531.34880	913.79200	0.74480	10.50870	8.73840	K562	FIP1L1
RP11-669N7.2	ENSG00000249196.2	1479.44780	1142.54640	0.37270	2.98330	2.09370	K562	FMR1
RP11-669N7.2	ENSG00000249196.2	1263.47370	968.46940	0.38350	2.69740	1.79450	K562	FTO
RP11-669N7.2	ENSG00000249196.2	647.71610	1299.34850	-1.00440	23.87790	22.21820	K562	FXR1
RP11-669N7.2	ENSG00000249196.2	1295.79930	944.20590	0.45660	4.66240	2.76440	K562	G3BP1
RP11-669N7.2	ENSG00000249196.2	1201.92530	776.02420	0.63110	3.67370	1.99610	K562	GEMIN5
RP11-669N7.2	ENSG00000249196.2	2433.15170	1293.59630	0.91130	11.83650	10.24790	K562	GRSF1
RP11-669N7.2	ENSG00000249196.2	1974.08330	1364.40070	0.53280	7.46630	5.77550	K562	HNRNPA1
RP11-669N7.2	ENSG00000249196.2	1469.81460	1056.99170	0.47560	5.08010	4.29310	K562	HNRNPC
RP11-669N7.2	ENSG00000249196.2	1500.93920	1181.39400	0.34530	3.10160	1.97800	K562	HNRNPL
RP11-669N7.2	ENSG00000249196.2	482.41240	751.66240	-0.63980	4.91130	3.63270	K562	HNRNPM
RP11-669N7.2	ENSG00000249196.2	1859.81470	1238.83020	0.58610	7.03720	5.77980	K562	HSPD1
RP11-669N7.2	ENSG00000249196.2	1426.29130	987.24220	0.53070	3.26770	2.12060	K562	IGF2BP2
RP11-669N7.2	ENSG00000249196.2	1341.12660	1004.31980	0.41710	3.84800	2.39540	K562	IGF2BP3
RP11-669N7.2	ENSG00000249196.2	2163.92700	1485.46750	0.54260	7.33210	5.82820	K562	KIF1C
RP11-669N7.2	ENSG00000249196.2	1926.83150	915.44220	1.07360	13.45120	11.26070	K562	KRR1
RP11-669N7.2	ENSG00000249196.2	746.75600	1024.44930	-0.45610	2.82670	1.42210	K562	LARP7
RP11-669N7.2	ENSG00000249196.2	1980.52340	1421.95800	0.47790	5.14990	3.52440	K562	MAK16
RP11-669N7.2	ENSG00000249196.2	1531.03160	1046.34940	0.54900	6.76720	5.36420	K562	METAP2
RP11-669N7.2	ENSG00000249196.2	1585.68090	952.00240	0.73600	17.46590	15.67950	K562	MTPAP
RP11-669N7.2	ENSG00000249196.2	1854.51330	1166.41280	0.66890	5.81310	4.36430	K562	NAA15
RP11-669N7.2	ENSG00000249196.2	1251.36680	763.58220	0.71250	4.60740	2.82100	K562	NONO
RP11-669N7.2	ENSG00000249196.2	1763.13920	1057.85510	0.73690	12.57670	11.14590	K562	NSUN2
RP11-669N7.2	ENSG00000249196.2	1331.20050	964.06700	0.46540	3.44400	1.40610	K562	PABPC4
RP11-669N7.2	ENSG00000249196.2	1834.56260	1164.07850	0.65610	3.10220	2.03950	K562	PABPN1
RP11-669N7.2	ENSG00000249196.2	714.19160	923.59150	-0.37090	2.65940	1.69950	K562	PCBP2
RP11-669N7.2	ENSG00000249196.2	1112.18500	733.55880	0.60030	3.48550	1.41500	K562	PES1
RP11-669N7.2	ENSG00000249196.2	1650.14910	1037.41470	0.66950	8.58570	6.94140	K562	PPIG
RP11-669N7.2	ENSG00000249196.2	450.27200	1008.40420	-1.16320	21.46310	19.68440	K562	PTBP1
RP11-669N7.2	ENSG00000249196.2	2390.73210	1987.71370	0.26620	2.56690	1.64000	K562	PUM2
RP11-669N7.2	ENSG00000249196.2	2603.43460	1388.15210	0.90720	6.92890	6.11500	K562	PUS1
RP11-669N7.2	ENSG00000249196.2	2062.55450	1352.54500	0.60870	5.79710	4.96520	K562	RBM15
RP11-669N7.2	ENSG00000249196.2	748.63120	1017.72660	-0.44300	3.49000	2.24250	K562	NELFE
RP11-669N7.2	ENSG00000249196.2	498.22690	766.93810	-0.62230	2.24730	1.51510	K562	RPS19
RP11-669N7.2	ENSG00000249196.2	630.46930	1571.76480	-1.31790	15.31810	12.86480	K562	RPS3
RP11-669N7.2	ENSG00000249196.2	1778.33550	1064.76880	0.73990	2.97210	1.70930	K562	SF1
RP11-669N7.2	ENSG00000249196.2	1766.57240	1043.69180	0.75920	16.80590	14.93300	K562	SF3A3
RP11-669N7.2	ENSG00000249196.2	2002.95310	1298.34810	0.62540	2.57560	1.33840	K562	SFPQ
RP11-669N7.2	ENSG00000249196.2	505.45780	988.52770	-0.96770	13.23560	11.68900	K562	SRSF1
RP11-669N7.2	ENSG00000249196.2	1255.88510	933.47940	0.42790	3.75270	2.49350	K562	SRSF5
RP11-669N7.2	ENSG00000249196.2	1532.53810	1187.40490	0.36800	4.73000	3.18140	K562	SRSF7
RP11-669N7.2	ENSG00000249196.2	1000.71970	698.92160	0.51770	6.84630	4.72170	K562	SSB
RP11-669N7.2	ENSG00000249196.2	1578.01260	1198.87130	0.39630	3.33240	1.82130	K562	SSRP1
RP11-669N7.2	ENSG00000249196.2	2090.45720	1664.10330	0.32900	3.25000	1.62540	K562	SUCLG1
RP11-669N7.2	ENSG00000249196.2	1075.27440	728.75950	0.56110	2.74800	1.73500	K562	SUPV3L1
RP11-669N7.2	ENSG00000249196.2	790.63760	1184.77950	-0.58350	7.62830	6.25490	K562	SYNCRIP
RP11-669N7.2	ENSG00000249196.2	1377.76840	1000.55070	0.46140	4.12980	3.26030	K562	TARDBP
RP11-669N7.2	ENSG00000249196.2	1492.78640	968.86510	0.62350	4.90590	3.56110	K562	TRIM56
RP11-669N7.2	ENSG00000249196.2	1429.63790	1068.64600	0.41980	3.42550	1.84870	K562	TRIP6
RP11-669N7.2	ENSG00000249196.2	2947.87190	2150.78240	0.45470	5.02450	3.14610	K562	UBE2L3
RP11-669N7.2	ENSG00000249196.2	1972.22830	1121.65860	0.81410	23.51780	21.67720	K562	UPF1
RP11-669N7.2	ENSG00000249196.2	2567.83100	1407.44140	0.86740	4.67390	2.83080	K562	UTP18
RP11-669N7.2	ENSG00000249196.2	1552.36070	959.78010	0.69360	10.59350	8.83600	K562	WDR3
RP11-669N7.2	ENSG00000249196.2	629.78410	997.97570	-0.66410	8.60460	7.19400	K562	WDR43
RP11-669N7.2	ENSG00000249196.2	2171.96390	1581.32850	0.45780	5.62800	3.78500	K562	WRN
RP11-669N7.2	ENSG00000249196.2	1149.32160	786.05010	0.54800	2.84180	1.61410	K562	XRN2
RP11-669N7.2	ENSG00000249196.2	2204.98010	1502.88850	0.55290	7.35060	5.82760	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-669N7.2 is not available on ENCORE database.

25 RBPs can affect the splicing of RP11-669N7.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595537	129595684	129594239	129594302	129597609	129597839	-0.10900	0.00008	0.05454	excluded	K562	TAF15
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	-0.11700	0.00112	0.02302	excluded	K562	SF3B4
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	-0.19300	0.00001	0.00056	excluded	K562	PRPF8
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	0.13500	0.00002	0.00874	included	K562	WDR3
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	-0.10700	0.00038	0.01461	excluded	K562	AKAP8L
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	0.09900	0.00043	0.05087	included	K562	FMR1
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	0.09900	0.00046	0.08442	included	K562	METAP2
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	0.10000	0.00205	0.02240	included	K562	AQR
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	0.18700	0.00000	0.00001	included	K562	HNRNPA1
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129595992	129595638	129595684	129597645	129597839	-0.06100	0.00592	0.07078	excluded	K562	PUS1
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596214	129595638	129595684	129597609	129597839	0.15700	0.00000	0.00102	included	K562	MTPAP
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596214	129595638	129595684	129597609	129597839	0.11600	0.00024	0.04590	included	K562	NSUN2
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596214	129595638	129595684	129597609	129597839	0.13000	0.00008	0.04473	included	K562	BUD13
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	-0.12300	0.00015	0.03694	excluded	K562	APOBEC3C
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	-0.15200	0.00002	0.00068	excluded	K562	U2AF1
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	0.12300	0.00011	0.08395	included	K562	DDX21
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	-0.14400	0.00000	0.00056	excluded	K562	SRSF7
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	0.11000	0.00040	0.06649	included	K562	UPF1
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596214	129595638	129595684	129597609	129597839	-0.19500	0.00000	0.00000	excluded	K562	U2AF2
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596214	129595638	129595684	129597609	129597839	0.43700	0.00000	0.00000	included	K562	HNRNPU
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596214	129595638	129595684	129597609	129597839	0.10900	0.00046	0.05110	included	K562	CPSF6
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	0.10100	0.00221	0.07361	included	K562	SF3B1
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596214	129595638	129595684	129597645	129597839	-0.09600	0.00011	0.04903	excluded	K562	NCBP2
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	-0.12800	0.00024	0.01519	excluded	K562	HNRNPK
SE	RP11-669N7.2	ENSG00000249196.2	chr12	+	129595964	129596060	129595537	129595684	129597609	129597838	-0.17200	0.00003	0.01222	excluded	K562	SERBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-669N7.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-669N7.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-669N7.2 is not avaliable on ENCORE database.

5 proteins are bound to RP11-669N7.2 RNA:

eCLIP assay for RP11-669N7.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-669N7.2 is not available on ENCORE database.

81 RBPs can affect the gene expression of RP11-669N7.2 :

The Knockdown/knockout RNA-Seq assay for RP11-669N7.2 is not available on ENCORE database.

25 RBPs can affect the splicing of RP11-669N7.2 :

The Knockdown/knockout RNA-Seq assay for RP11-669N7.2 is not avaliable on ENCORE database.