MED29

General Information

Gene Name       : MED29
Gene ID             : ENSG00000063322.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MED29)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MED29ENSG00000063322.1310.5215.6613.09ENCSR000AEF
HepG2MED29ENSG00000063322.1315.6011.7913.70ENCSR985KAT
K562MED29ENSG00000063322.1313.8712.1112.99ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MED29 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MED29 RNA is bound by 9 proteins.  







eCLIP assay for MED29 is not avaliable on ENCORE database.





9 proteins are bound to MED29 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr193988852139888574+3'-UTR4.229144.51674HepG2AKAP1
chr193988423739884283+3'-UTR,5'-UTR,CDS,intron-Proximal3.783954.52024HepG2PPIG
chr193988855339888657+3'-UTR5.3732310.64766HepG2UPF1
chr193988931939889361+3'-UTR5.194796.29854K562UPF1
chr193988911839889153+3'-UTR4.491914.46422K562UPF1
chr193988874339888889+3'-UTR4.9780919.70178HepG2PTBP1
chr193988918139889226+3'-UTR4.786455.63383K562UPF1
chr193988875139888905+3'-UTR4.8758211.60568HepG2UPF1
chr193989032639890425+3'-UTR3.078543.52704HepG2IGF2BP1
chr193988890539889071+3'-UTR5.6651713.62665HepG2UPF1
chr193988858939888609+3'-UTR4.545374.22051K562UPF1
chr193988858139888670+3'-UTR4.100756.94394HepG2AKAP1
chr193989031939890443+3'-UTR4.214484.25090K562IGF2BP2
chr193988875839888899+3'-UTR3.5875110.44220HepG2AKAP1
chr193988945839889610+3'-UTR3.942617.04160K562FAM120A
chr193988915839889242+3'-UTR3.876146.36332HepG2UPF1
chr193988872339888875+3'-UTR4.097789.48246K562PTBP1
chr193988860539888664+3'-UTR4.181705.00478HepG2PCBP2
chr193988208539882212+CDS4.587057.13477K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MED29 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MED29 is not available on ENCORE database.

  • 113 RBPs can affect the levels of MED29.  








The Knockdown/knockout RNA-Seq assay for MED29 is not available on ENCORE database.





113 RBPs can affect the gene expression of MED29 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MED29ENSG00000063322.91544.687501020.892900.597405.568004.28120HepG2ABCF1
MED29ENSG00000063322.9846.74680680.531900.315203.045302.41240HepG2ACO1
MED29ENSG00000063322.91238.26840894.637500.468803.107902.54840HepG2AKAP1
MED29ENSG00000063322.91358.67400740.221100.8761011.190009.69370HepG2ASCC1
MED29ENSG00000063322.9403.05520537.79130-0.416102.172001.34510HepG2BCCIP
MED29ENSG00000063322.91568.00680966.737100.697609.480908.45750HepG2BOP1
MED29ENSG00000063322.9990.62160765.279600.372203.233602.40570HepG2CALR
MED29ENSG00000063322.91266.10200966.784200.389002.161701.30890HepG2CCAR1
MED29ENSG00000063322.91221.58610703.266200.796509.437808.08260HepG2CIRBP
MED29ENSG00000063322.9831.44360680.290500.289402.742702.07920HepG2CKAP4
MED29ENSG00000063322.91125.71880718.060900.6486010.512609.41590HepG2CELF1
MED29ENSG00000063322.9924.05540772.128500.259002.320401.63360HepG2DAZAP1
MED29ENSG00000063322.9909.60730629.351500.531308.332907.02210HepG2DDX19B
MED29ENSG00000063322.9725.02700530.603100.450304.164302.76360HepG2DDX1
MED29ENSG00000063322.9830.31270494.711300.747005.038903.36090HepG2DDX27
MED29ENSG00000063322.91451.72050856.959900.760408.575407.52460HepG2DDX3X
MED29ENSG00000063322.9772.24190528.780700.546303.152802.33490HepG2DDX55
MED29ENSG00000063322.91497.90910850.277500.8168011.473009.57890HepG2DDX5
MED29ENSG00000063322.9696.23090501.818300.472303.686002.56080HepG2DHX30
MED29ENSG00000063322.91061.38560651.060400.7050012.2061010.99680HepG2DKC1
MED29ENSG00000063322.9675.49580520.270100.376603.109002.36760HepG2DNAJC21
MED29ENSG00000063322.9617.44190515.753600.259501.974201.40630HepG2DNAJC2
MED29ENSG00000063322.9867.57010622.451800.478903.328702.32490HepG2EEF2
MED29ENSG00000063322.91006.77380782.021900.364402.039201.48770HepG2EIF4A3
MED29ENSG00000063322.9978.42790761.720500.361103.589702.65640HepG2EIF4G1
MED29ENSG00000063322.91176.75470884.416000.411903.369302.16850HepG2ESF1
MED29ENSG00000063322.91394.110101140.540900.289502.964302.34540HepG2ETF1
MED29ENSG00000063322.9908.14300664.918300.449604.007103.00310HepG2EWSR1
MED29ENSG00000063322.9672.69600449.848600.580404.550403.39240HepG2GEMIN5
MED29ENSG00000063322.91340.338101006.115500.413702.870502.21880HepG2GPKOW
MED29ENSG00000063322.9755.70440525.255300.524704.326903.54270HepG2HNRNPA1
MED29ENSG00000063322.9603.52060407.104700.567903.286401.62110HepG2HNRNPD
MED29ENSG00000063322.91244.07850880.563900.498506.017205.01390HepG2HNRNPF
MED29ENSG00000063322.91211.43910960.151600.335302.230101.65870HepG2HNRNPLL
MED29ENSG00000063322.9778.94050580.410400.424304.600503.83540HepG2HNRNPU
MED29ENSG00000063322.91242.00680867.099000.518302.843402.10890HepG2IGF2BP1
MED29ENSG00000063322.91262.04180744.026100.762208.624007.50200HepG2IGF2BP2
MED29ENSG00000063322.9855.07200592.865600.528208.073506.88990HepG2ILF2
MED29ENSG00000063322.91469.975701020.965000.525803.706902.74620HepG2LARP4
MED29ENSG00000063322.9418.10430562.64650-0.428402.867601.63260HepG2LIN28B
MED29ENSG00000063322.91150.24210789.423400.543004.004303.21600HepG2MAGOH
MED29ENSG00000063322.91572.64740793.822200.9862012.6290011.35100HepG2MATR3
MED29ENSG00000063322.91164.07520812.505300.518604.047203.28670HepG2NCBP2
MED29ENSG00000063322.9736.95760485.659800.601502.396001.38410HepG2NONO
MED29ENSG00000063322.91060.16920851.334700.316401.991901.35210HepG2NSUN2
MED29ENSG00000063322.9460.96110574.47470-0.317602.228501.46050HepG2PARN
MED29ENSG00000063322.91068.57980769.254500.474106.569105.69590HepG2PCBP1
MED29ENSG00000063322.9591.39630417.837400.501104.148102.63230HepG2PKM
MED29ENSG00000063322.9542.60940860.72630-0.6656010.043508.70630HepG2PRPF4
MED29ENSG00000063322.91054.03940707.626200.574803.400602.05980HepG2PRPF6
MED29ENSG00000063322.9949.55060775.827400.291403.123102.50270HepG2PUM1
MED29ENSG00000063322.91155.22810693.152200.7368015.7034014.44560HepG2PUS1
MED29ENSG00000063322.9844.40460646.334300.385602.173101.30410HepG2RBM27
MED29ENSG00000063322.91128.24830871.128900.373003.788903.17470HepG2NELFE
MED29ENSG00000063322.91012.47300811.384300.319303.172302.51870HepG2RECQL
MED29ENSG00000063322.91850.91670948.658300.9642017.1013015.68920HepG2RPLP0
MED29ENSG00000063322.9868.03680638.300700.443402.163101.32570HepG2RPS10
MED29ENSG00000063322.9639.03400491.673600.378102.413001.83400HepG2RPS19
MED29ENSG00000063322.9699.48880472.012500.567403.350402.47140HepG2RPS3A
MED29ENSG00000063322.9134.38140403.39180-1.5858015.7386014.13850HepG2RRP9
MED29ENSG00000063322.9690.05800493.404400.483803.231102.21230HepG2SERBP1
MED29ENSG00000063322.9995.19300814.915800.288202.588202.01230HepG2SF3B4
MED29ENSG00000063322.9951.35410700.755500.441005.810604.85670HepG2SLBP
MED29ENSG00000063322.9773.31670602.727400.359503.389302.68940HepG2SMN1
MED29ENSG00000063322.91029.50280721.602700.512607.105406.16620HepG2SRSF5
MED29ENSG00000063322.91308.09610865.142300.5964010.490409.28540HepG2SRSF7
MED29ENSG00000063322.91230.44830934.791900.396405.268704.60510HepG2SSB
MED29ENSG00000063322.91168.20760820.673400.509308.195607.22040HepG2SUCLG1
MED29ENSG00000063322.9488.00880696.17520-0.512504.279803.12230HepG2SUPT6H
MED29ENSG00000063322.9912.12980713.999000.353202.616901.76870HepG2TUFM
MED29ENSG00000063322.91219.71160910.808000.421205.806904.99210HepG2UTP3
MED29ENSG00000063322.9746.22440518.146400.526103.253402.47100HepG2XRN2
MED29ENSG00000063322.91230.03660849.436900.534009.622408.49770HepG2ZC3H8
MED29ENSG00000063322.9337.95180565.17650-0.741908.483307.56180K562AGGF1
MED29ENSG00000063322.9388.68440588.08230-0.597404.660003.80490K562AKAP8L
MED29ENSG00000063322.91009.97830765.151800.400402.993001.70050K562APOBEC3C
MED29ENSG00000063322.91007.60350652.860900.626004.399403.69160K562AQR
MED29ENSG00000063322.9905.54700666.575200.441903.180002.24420K562BOP1
MED29ENSG00000063322.91553.34380779.499800.9947028.4699026.58970K562DDX47
MED29ENSG00000063322.9527.61860351.978000.583904.379702.66130K562DNAJC21
MED29ENSG00000063322.9396.45630283.314600.484703.195001.88510K562EIF2S1
MED29ENSG00000063322.9675.29330332.938901.020205.841604.34470K562EIF3A
MED29ENSG00000063322.9462.50020291.483600.665905.966604.81090K562EIF3G
MED29ENSG00000063322.9421.44860269.492300.645004.646603.58370K562EIF4A3
MED29ENSG00000063322.91236.24350867.130800.511507.112805.62310K562EIF4G2
MED29ENSG00000063322.91102.39430721.151300.612206.126404.84130K562FMR1
MED29ENSG00000063322.9587.41780280.258701.0675015.5303014.20620K562FXR1
MED29ENSG00000063322.9749.61380561.705000.416202.921801.75080K562GLRX3
MED29ENSG00000063322.9930.53210676.684200.459503.874102.94250K562GPKOW
MED29ENSG00000063322.91024.27900660.171200.633603.251201.69070K562ILF2
MED29ENSG00000063322.9407.75380624.13550-0.614205.088303.90330K562KIF1C
MED29ENSG00000063322.9818.26060577.813300.501902.950401.98310K562KRR1
MED29ENSG00000063322.9413.81870289.357400.516003.491702.43990K562MATR3
MED29ENSG00000063322.9554.80450699.18480-0.333702.227901.42640K562MBNL1
MED29ENSG00000063322.9906.54240660.520800.456703.966502.90610K562METAP2
MED29ENSG00000063322.91247.53650924.287700.432603.821002.49770K562MSI2
MED29ENSG00000063322.9780.54150590.548900.402302.504001.73440K562MTPAP
MED29ENSG00000063322.9327.28150490.07500-0.582503.044002.11090K562NAA15
MED29ENSG00000063322.9797.18900656.212300.280702.444601.73880K562NSUN2
MED29ENSG00000063322.9282.93440438.98650-0.633702.158701.30550K562PABPN1
MED29ENSG00000063322.91141.51800742.980600.619505.583304.39660K562PCBP3
MED29ENSG00000063322.9935.43780569.863400.714909.597908.14390K562POLR2G
MED29ENSG00000063322.9448.69770281.752500.671205.815704.88190K562PTBP1
MED29ENSG00000063322.91369.38170946.115300.533305.580904.42390K562PUF60
MED29ENSG00000063322.91222.48810986.018900.310003.092102.07970K562PUM2
MED29ENSG00000063322.9355.06930583.28400-0.716106.133705.36410K562PUS1
MED29ENSG00000063322.9370.32370568.26630-0.617805.872605.03640K562RBM15
MED29ENSG00000063322.9739.89600328.873901.1697013.1447011.33710K562RPS19
MED29ENSG00000063322.9541.94680325.064000.737305.125703.70420K562RPS3
MED29ENSG00000063322.9694.74670507.850100.452003.392702.19000K562SAFB
MED29ENSG00000063322.9826.40990647.425700.352002.991602.14660K562SF3A3
MED29ENSG00000063322.9913.94290643.563700.505903.475102.38170K562SF3B1
MED29ENSG00000063322.9260.01400461.03560-0.826303.158201.81100K562SNRNP200
MED29ENSG00000063322.9470.57770322.485500.545103.393901.55130K562SRP68
MED29ENSG00000063322.9624.69280276.237701.1771016.6204014.89510K562SRSF1
MED29ENSG00000063322.9434.08950313.804300.468002.633201.61220K562SRSF4
MED29ENSG00000063322.9816.23270571.626600.513805.054903.93740K562SYNCRIP
MED29ENSG00000063322.9484.66560279.513900.794006.810505.65590K562TARDBP
MED29ENSG00000063322.9116.66590183.40080-0.652602.290501.56110K562U2AF2
MED29ENSG00000063322.9528.20730330.851700.674804.922003.52380K562UCHL5
MED29ENSG00000063322.91195.30840695.791100.7806013.5323012.08740K562UPF1
MED29ENSG00000063322.9862.52840619.067300.478406.183804.97240K562WDR43
MED29ENSG00000063322.9539.62060336.950500.679305.135403.30320K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MED29 is not available on ENCORE database.





1 RBPs can affect the splicing of MED29 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMED29ENSG00000063322.9chr19+398832913988344239883103398831623988419239884277-0.268000.000640.09400excludedK562GPKOW

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MED29 is not avaliable on ENCORE database.