SEC61A2

General Information

Gene Name       : SEC61A2
Gene ID             : ENSG00000065665.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SEC61A2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SEC61A2ENSG00000065665.209.386.728.05ENCSR000AEF
HepG2SEC61A2ENSG00000065665.206.417.426.92ENCSR985KAT
K562SEC61A2ENSG00000065665.202.682.612.65ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SEC61A2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SEC61A2 RNA is bound by 3 proteins.  







eCLIP assay for SEC61A2 is not avaliable on ENCORE database.





3 proteins are bound to SEC61A2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr101220703612207148+3'-UTR,intron-Distal4.133333.88460HepG2PCBP2
chr101219985912199933+3'-UTR,CDS,intron-Distal,intron-Proximal4.032209.01749K562SF3B4
chr101219994612200037+3'-UTR,CDS,intron-Distal4.190923.53690K562ZNF622
chr101220622112206279+CDS,intron-Distal,intron-Proximal4.845474.26208K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SEC61A2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SEC61A2 is not available on ENCORE database.

  • 88 RBPs can affect the levels of SEC61A2.  








The Knockdown/knockout RNA-Seq assay for SEC61A2 is not available on ENCORE database.





88 RBPs can affect the gene expression of SEC61A2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SEC61A2ENSG00000065665.16332.70230193.840800.779303.678402.59710HepG2ABCF1
SEC61A2ENSG00000065665.16210.43600140.556600.582101.935701.48180HepG2AKAP1
SEC61A2ENSG00000065665.16286.98160142.200001.012908.919407.64130HepG2AKAP8L
SEC61A2ENSG00000065665.16157.97620247.55600-0.648003.089902.46140HepG2BOP1
SEC61A2ENSG00000065665.16429.46420194.201401.144908.812307.07480HepG2CCAR1
SEC61A2ENSG00000065665.16195.43150110.490200.822603.648802.76920HepG2CIRBP
SEC61A2ENSG00000065665.16198.59720141.499500.488902.192301.58940HepG2CKAP4
SEC61A2ENSG00000065665.16182.2044080.845501.172203.363502.51410HepG2CNOT7
SEC61A2ENSG00000065665.16131.51860192.70050-0.551102.370301.76760HepG2CELF1
SEC61A2ENSG00000065665.16236.87800109.583801.112005.568004.64110HepG2DDX21
SEC61A2ENSG00000065665.16191.68350107.077300.840003.956502.85260HepG2DDX24
SEC61A2ENSG00000065665.16215.26260135.425500.668503.399802.65960HepG2DKC1
SEC61A2ENSG00000065665.16188.10680104.385400.849503.504202.47220HepG2EEF2
SEC61A2ENSG00000065665.16175.1578087.046601.008704.901803.42740HepG2EFTUD2
SEC61A2ENSG00000065665.16302.45090122.863301.299509.770808.58350HepG2EIF4A3
SEC61A2ENSG00000065665.16187.66200119.636800.649402.027701.43370HepG2EIF4B
SEC61A2ENSG00000065665.16257.09860167.934200.614302.909401.78990HepG2ESF1
SEC61A2ENSG00000065665.16339.36720261.460000.376201.915001.39510HepG2ETF1
SEC61A2ENSG00000065665.16243.86100148.981400.710803.022301.85490HepG2FUS
SEC61A2ENSG00000065665.16222.05690123.983200.840704.070903.24300HepG2FXR1
SEC61A2ENSG00000065665.16194.21420122.103100.669402.644101.77510HepG2G3BP2
SEC61A2ENSG00000065665.16152.2150075.466401.012104.402803.26360HepG2GEMIN5
SEC61A2ENSG00000065665.16202.72280135.130600.585103.038602.01960HepG2HDGF
SEC61A2ENSG00000065665.16114.65430188.74380-0.719103.735302.95990HepG2HNRNPL
SEC61A2ENSG00000065665.16391.74410245.875300.671904.138803.38420HepG2HNRNPLL
SEC61A2ENSG00000065665.16294.92050135.068301.126509.300007.73220HepG2HNRNPM
SEC61A2ENSG00000065665.16336.91300116.893901.5271014.0135012.62510HepG2IGF2BP2
SEC61A2ENSG00000065665.1692.96620172.44470-0.891403.364202.56220HepG2ILF2
SEC61A2ENSG00000065665.16167.9843090.904300.885804.180702.18730HepG2CCAR2
SEC61A2ENSG00000065665.16336.46870205.121700.713903.606402.65870HepG2LARP4
SEC61A2ENSG00000065665.16221.91590105.648501.070606.278904.48030HepG2LIN28B
SEC61A2ENSG00000065665.16287.44230124.026601.212508.545107.40710HepG2MAGOH
SEC61A2ENSG00000065665.16310.40600124.717601.315409.379908.27560HepG2MATR3
SEC61A2ENSG00000065665.16144.18520205.45950-0.510902.207101.52540HepG2NOL12
SEC61A2ENSG00000065665.16190.49630113.671500.744803.128502.36320HepG2PABPC4
SEC61A2ENSG00000065665.16186.78930123.548100.596202.645202.04880HepG2PCBP1
SEC61A2ENSG00000065665.16129.6221070.086000.887003.546702.15200HepG2PKM
SEC61A2ENSG00000065665.1695.43660150.57490-0.657902.292201.61430HepG2PPIL4
SEC61A2ENSG00000065665.16212.95140149.518700.510102.373301.65010HepG2PRPF4
SEC61A2ENSG00000065665.16247.11490130.750300.918304.675503.65620HepG2PRPF8
SEC61A2ENSG00000065665.16356.11440196.129100.860406.676205.80330HepG2PUF60
SEC61A2ENSG00000065665.16143.39070208.19960-0.538002.688302.10190HepG2PUM1
SEC61A2ENSG00000065665.16309.37490208.047600.572303.282902.55220HepG2PUM2
SEC61A2ENSG00000065665.16226.07260136.159000.731403.660102.95670HepG2QKI
SEC61A2ENSG00000065665.16305.85420218.529500.484902.558702.05550HepG2RBM22
SEC61A2ENSG00000065665.16290.53200139.906701.054108.101107.26260HepG2NELFE
SEC61A2ENSG00000065665.16164.7707082.453800.998704.811104.02570HepG2RPS19
SEC61A2ENSG00000065665.16248.91260111.894601.153407.273706.01480HepG2RPS2
SEC61A2ENSG00000065665.16339.50740163.597701.053206.961705.85870HepG2SF3A3
SEC61A2ENSG00000065665.16147.38590243.37530-0.723603.499502.71530HepG2SF3B1
SEC61A2ENSG00000065665.16350.88710246.816400.507503.215802.68880HepG2SRFBP1
SEC61A2ENSG00000065665.16311.62690136.616301.1896010.643209.84830HepG2SRSF1
SEC61A2ENSG00000065665.16133.54070184.16370-0.463702.028201.42180HepG2SRSF7
SEC61A2ENSG00000065665.16413.89410214.286900.9496010.801309.91640HepG2SSB
SEC61A2ENSG00000065665.16288.37380220.232100.388801.977901.43490HepG2SUCLG1
SEC61A2ENSG00000065665.16251.09260122.783001.032007.674206.81700HepG2TAF15
SEC61A2ENSG00000065665.1656.04140113.10180-1.013103.036401.99530HepG2TFIP11
SEC61A2ENSG00000065665.16278.60620164.095200.763601.999001.55930HepG2TIAL1
SEC61A2ENSG00000065665.16108.57590165.50100-0.608102.091701.58830HepG2TRIM56
SEC61A2ENSG00000065665.16213.44720145.085400.556902.835002.12870HepG2UPF1
SEC61A2ENSG00000065665.16329.09310140.075301.2322012.6535011.51330HepG2UTP3
SEC61A2ENSG00000065665.16282.69130149.682800.917205.009103.60910HepG2XRCC6
SEC61A2ENSG00000065665.16295.24200159.567200.887607.922507.12000HepG2ZNF622
SEC61A2ENSG00000065665.16296.66820162.032600.872507.103006.25590K562AGGF1
SEC61A2ENSG00000065665.16276.83510178.074100.636402.179801.31920K562AKAP8
SEC61A2ENSG00000065665.16312.17220168.608300.888606.863605.79740K562AKAP8L
SEC61A2ENSG00000065665.16309.39850118.873701.3799011.2831010.21570K562AQR
SEC61A2ENSG00000065665.16169.7202098.121200.790403.067502.14680K562BOP1
SEC61A2ENSG00000065665.16152.2952085.356400.835203.166701.62530K562BUD13
SEC61A2ENSG00000065665.16320.58080193.618000.727405.558303.85470K562CCDC124
SEC61A2ENSG00000065665.16160.19700104.329300.618602.260801.54510K562CPSF6
SEC61A2ENSG00000065665.16156.44460106.038500.561002.058401.34720K562EIF4A3
SEC61A2ENSG00000065665.16207.01980106.156000.963504.929503.77930K562FMR1
SEC61A2ENSG00000065665.16147.1645089.978200.709702.529301.65880K562FTO
SEC61A2ENSG00000065665.16139.3133088.995900.646402.424201.36310K562GLRX3
SEC61A2ENSG00000065665.16310.71810142.765301.121904.709502.98480K562HNRNPA2B1
SEC61A2ENSG00000065665.16359.70220178.914201.007406.754705.33070K562KIF1C
SEC61A2ENSG00000065665.16178.0530085.056001.065704.445603.22990K562KRR1
SEC61A2ENSG00000065665.16293.40560200.432100.549702.467301.61700K562MBNL1
SEC61A2ENSG00000065665.16287.59210140.490301.033506.119404.61170K562NAA15
SEC61A2ENSG00000065665.16157.39890103.960300.598302.323801.63380K562NSUN2
SEC61A2ENSG00000065665.16179.08080110.986400.690103.193901.74180K562PCBP1
SEC61A2ENSG00000065665.16248.62340166.838400.575402.391101.63440K562PUF60
SEC61A2ENSG00000065665.16426.04500167.169601.3496014.2786013.08740K562PUS1
SEC61A2ENSG00000065665.16309.31990162.917700.924905.986205.14040K562RBM15
SEC61A2ENSG00000065665.16174.70290102.585300.768003.740202.79970K562SF3A3
SEC61A2ENSG00000065665.16200.2782094.735301.079903.249102.19310K562SF3B1
SEC61A2ENSG00000065665.16253.20060131.115700.949303.155801.80940K562SNRNP200
SEC61A2ENSG00000065665.16177.85650105.101200.758803.663902.60380K562SRPK2
SEC61A2ENSG00000065665.16284.04810156.803300.857102.703601.30220K562SUPT6H
SEC61A2ENSG00000065665.16118.8168061.595500.947703.036901.96920K562SUPV3L1
SEC61A2ENSG00000065665.16163.98680110.231500.572902.216901.56910K562UPF1
SEC61A2ENSG00000065665.16314.73720169.536700.892504.017502.36230K562UTP18
SEC61A2ENSG00000065665.16149.6473094.321300.665802.564301.71850K562WDR3
SEC61A2ENSG00000065665.16229.53340140.894200.704002.906801.58030K562WRN
SEC61A2ENSG00000065665.16263.43360133.890100.976307.088205.59670K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SEC61A2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SEC61A2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SEC61A2 is not avaliable on ENCORE database.