ASTE1

General Information

Gene Name       : ASTE1
Gene ID             : ENSG00000034533.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ASTE1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ASTE1ENSG00000034533.115.895.585.73ENCSR000AEF
HepG2ASTE1ENSG00000034533.113.886.064.97ENCSR985KAT
K562ASTE1ENSG00000034533.113.414.413.91ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ASTE1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ASTE1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ASTE1 is not avaliable on ENCORE database.






NO known proteins are bound to ASTE1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ASTE1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ASTE1 is not available on ENCORE database.

  • 36 RBPs can affect the levels of ASTE1.  








The Knockdown/knockout RNA-Seq assay for ASTE1 is not available on ENCORE database.





36 RBPs can affect the gene expression of ASTE1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ASTE1ENSG00000034533.7177.77930111.596400.671702.166701.33050HepG2ABCF1
ASTE1ENSG00000034533.7271.06890131.379301.044806.675305.50830HepG2CIRBP
ASTE1ENSG00000034533.7248.05300104.873101.241908.935407.78820HepG2DDX21
ASTE1ENSG00000034533.7225.5697091.140601.3073010.016908.89060HepG2DKC1
ASTE1ENSG00000034533.7156.4704080.247600.963303.579502.53960HepG2EEF2
ASTE1ENSG00000034533.7113.7842058.003700.972003.125102.16820HepG2GEMIN5
ASTE1ENSG00000034533.7225.57030126.140100.838502.776102.13410HepG2GPKOW
ASTE1ENSG00000034533.7156.7876090.346500.795202.910702.24900HepG2HNRNPA1
ASTE1ENSG00000034533.7265.65200120.377301.141907.508906.53010HepG2HNRNPLL
ASTE1ENSG00000034533.7232.86600139.014900.744203.534302.78090HepG2IGF2BP2
ASTE1ENSG00000034533.7228.07070135.786500.748003.089402.20810HepG2LARP4
ASTE1ENSG00000034533.7181.41950109.546700.727702.853201.62160HepG2LIN28B
ASTE1ENSG00000034533.7244.72680147.438700.731003.535002.79300HepG2MAGOH
ASTE1ENSG00000034533.7164.5328091.214100.850903.600102.67930HepG2MSI2
ASTE1ENSG00000034533.791.04390157.44250-0.790203.613102.93910HepG2PCBP1
ASTE1ENSG00000034533.797.5138053.872900.855902.648001.44700HepG2PKM
ASTE1ENSG00000034533.7158.28800109.106300.536702.171501.47900HepG2PRPF4
ASTE1ENSG00000034533.7266.77700119.992701.152608.792407.80960HepG2PUF60
ASTE1ENSG00000034533.7252.7560097.031201.3811013.2564012.08330HepG2PUS1
ASTE1ENSG00000034533.796.87820157.46890-0.700802.824902.14410HepG2RBM25
ASTE1ENSG00000034533.7196.84050134.915400.544902.093101.48930HepG2RPLP0
ASTE1ENSG00000034533.7111.1615063.621500.805002.433301.54910HepG2SERBP1
ASTE1ENSG00000034533.7209.96330130.024900.691202.571801.92150HepG2SF3A3
ASTE1ENSG00000034533.7185.04490119.152900.635002.366901.71180HepG2SF3B1
ASTE1ENSG00000034533.7109.46700155.03310-0.502101.818601.38660HepG2SRFBP1
ASTE1ENSG00000034533.792.67030141.62600-0.611902.470301.94170HepG2SRSF9
ASTE1ENSG00000034533.7395.35790134.600201.5544022.7845021.62440HepG2SSB
ASTE1ENSG00000034533.7160.51550103.435000.633902.143401.53810HepG2SUPV3L1
ASTE1ENSG00000034533.7166.9138096.994600.783003.663203.10520HepG2TIAL1
ASTE1ENSG00000034533.7215.2134096.404001.158506.426505.48620HepG2U2AF1
ASTE1ENSG00000034533.7180.16290115.311600.643703.082502.35430HepG2UPF1
ASTE1ENSG00000034533.7170.60220111.329800.615702.493501.91920HepG2UTP3
ASTE1ENSG00000034533.7186.21460107.667600.790304.316003.50700HepG2ZC3H8
ASTE1ENSG00000034533.7196.79330126.821600.633803.309402.72720HepG2ZNF622
ASTE1ENSG00000034533.7243.25020169.715800.519202.451101.46400K562HNRNPL
ASTE1ENSG00000034533.784.80620128.90570-0.604101.917801.32170K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ASTE1 is not available on ENCORE database.





1 RBPs can affect the splicing of ASTE1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEASTE1ENSG00000034533.7chr3-1307358331307358931307349871307351831307373491307375820.179000.009840.08021includedK562AQR
A3SSASTE1ENSG00000034533.7chr3-1307351341307352641307351341307351831307373491307375920.272000.004430.02598longerK562AQR
A3SSASTE1ENSG00000034533.7chr3-1307373491307375921307373491307375601307428481307441750.204000.003800.02270longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ASTE1 is not avaliable on ENCORE database.