TUBG2

General Information

Gene Name       : TUBG2
Gene ID             : ENSG00000037042.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TUBG2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TUBG2ENSG00000037042.83.655.964.80ENCSR000AEF
HepG2TUBG2ENSG00000037042.828.0717.9823.02ENCSR985KAT
K562TUBG2ENSG00000037042.80.250.160.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TUBG2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TUBG2 RNA is bound by 12 proteins.  







eCLIP assay for TUBG2 is not avaliable on ENCORE database.





12 proteins are bound to TUBG2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174081878740818845+3'-UTR,CDS3.570274.77076HepG2LSM11
chr174081889140818953+3'-UTR3.112113.44847HepG2PABPN1
chr174081139140811456+5'-UTR4.006203.19625HepG2NCBP2
chr174081133140811391+5'-UTR3.111176.25617HepG2NCBP2
chr174081134840811368+5'-UTR3.139043.41665HepG2GRWD1
chr174081537140815475+CDS,intron-Proximal4.0546611.78563HepG2U2AF2
chr174081266140812721+CDS4.134588.16229HepG2GRWD1
chr174081268940812736+CDS,intron-Proximal5.9102925.39729HepG2PRPF8
chr174081153440811562+CDS4.653734.94878HepG2GRWD1
chr174081755440817583+CDS,intron-Proximal3.186453.47879HepG2PPIG
chr174081869840818787+CDS3.351295.12988HepG2LSM11
chr174081269240812835+CDS,intron-Distal,intron-Proximal3.4130111.76394HepG2BCLAF1
chr174081229140812335+CDS,intron-Proximal3.173815.54854HepG2GRWD1
chr174081547940815521+CDS3.547296.54857HepG2PPIG
chr174081752940817594+CDS,intron-Proximal4.280608.70622HepG2GRWD1
chr174081267840812735+CDS,intron-Proximal3.639898.19289HepG2PPIG
chr174081532440815403+CDS,intron-Proximal3.7223012.98184HepG2SF3A3
chr174081332340813355+intron-Distal3.9108513.70741HepG2QKI
chr174081161640811738+intron-Distal,intron-Proximal3.574824.16645HepG2HNRNPK
chr174081273640812846+intron-Distal,intron-Proximal3.7533122.45277HepG2PRPF8
chr174081335540813368+intron-Distal3.4149611.23641HepG2QKI
chr174081273040812802+intron-Proximal3.094547.20932HepG2EFTUD2
chr174081273540812799+intron-Proximal3.227778.60746HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TUBG2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TUBG2 is not available on ENCORE database.

  • 89 RBPs can affect the levels of TUBG2.  








The Knockdown/knockout RNA-Seq assay for TUBG2 is not available on ENCORE database.





89 RBPs can affect the gene expression of TUBG2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TUBG2ENSG00000037042.8527.67980993.95820-0.913505.353704.64330HepG2AKAP1
TUBG2ENSG00000037042.81227.78170982.519300.321403.570802.80760HepG2AUH
TUBG2ENSG00000037042.8736.29570439.523800.744205.235703.93960HepG2BCCIP
TUBG2ENSG00000037042.8604.78800381.881200.663204.456503.33890HepG2BCLAF1
TUBG2ENSG00000037042.8780.49100623.161200.324701.973801.46060HepG2BOP1
TUBG2ENSG00000037042.81199.12950736.140500.703808.640706.58980HepG2BUD13
TUBG2ENSG00000037042.8525.84800675.36420-0.361002.355401.63950HepG2CALR
TUBG2ENSG00000037042.81648.54840878.171300.908509.670807.85850HepG2CCAR1
TUBG2ENSG00000037042.81013.83230715.666600.502407.854506.84290HepG2CKAP4
TUBG2ENSG00000037042.8815.73010572.090400.511703.913803.10960HepG2CPSF6
TUBG2ENSG00000037042.8774.87840494.480900.648008.247206.50760HepG2YBX3
TUBG2ENSG00000037042.8950.12140748.747500.343503.384702.68850HepG2CELF1
TUBG2ENSG00000037042.8826.96160662.074500.320703.342702.43510HepG2DDX19B
TUBG2ENSG00000037042.8749.34400432.159100.794005.978604.89550HepG2DDX55
TUBG2ENSG00000037042.8985.52980684.910200.524906.995406.01250HepG2DKC1
TUBG2ENSG00000037042.81042.14660485.501001.1019025.0956023.21140HepG2DNAJC21
TUBG2ENSG00000037042.8795.23410481.275200.7244013.0458011.73810HepG2DNAJC2
TUBG2ENSG00000037042.8722.91880501.725600.526803.823902.51180HepG2EFTUD2
TUBG2ENSG00000037042.81138.10470786.133500.533704.317603.58630HepG2EIF2S1
TUBG2ENSG00000037042.81013.79500794.262400.352002.196601.43600HepG2EIF4G1
TUBG2ENSG00000037042.81510.447401128.127900.420905.872205.05070HepG2ETF1
TUBG2ENSG00000037042.8436.48270699.49420-0.680407.147805.81020HepG2EWSR1
TUBG2ENSG00000037042.8607.88900436.802400.476703.070201.82790HepG2FAM120A
TUBG2ENSG00000037042.81299.51460813.179600.676206.501705.50570HepG2G3BP1
TUBG2ENSG00000037042.8624.58220435.016000.521703.761102.70110HepG2GEMIN5
TUBG2ENSG00000037042.81449.61570648.493901.1604017.3406015.87620HepG2GPKOW
TUBG2ENSG00000037042.8865.86340683.436400.341203.395202.32000HepG2HDGF
TUBG2ENSG00000037042.8676.63060490.152900.465003.403602.69560HepG2HNRNPA1
TUBG2ENSG00000037042.8919.20500739.878400.313002.817801.87690HepG2HNRNPA2B1
TUBG2ENSG00000037042.81102.85490630.047200.807604.458402.54010HepG2HNRNPD
TUBG2ENSG00000037042.81058.66830597.332600.8255016.8334015.26150HepG2HNRNPF
TUBG2ENSG00000037042.8963.98630733.317500.394505.076004.18530HepG2HNRNPL
TUBG2ENSG00000037042.81114.74350618.871000.8489010.260609.13700HepG2HNRNPLL
TUBG2ENSG00000037042.81601.40300541.618701.5639043.1974041.03240HepG2HNRNPU
TUBG2ENSG00000037042.8951.95700588.203300.694509.275908.01960HepG2IGF2BP1
TUBG2ENSG00000037042.81285.46940826.480700.637106.260905.28300HepG2IGF2BP2
TUBG2ENSG00000037042.8459.95550776.01370-0.754602.533901.59710HepG2IGF2BP3
TUBG2ENSG00000037042.81097.38430709.173500.629804.194502.53470HepG2ILF3
TUBG2ENSG00000037042.8907.24060654.377300.471306.693205.14890HepG2KIF1C
TUBG2ENSG00000037042.8603.65170882.03620-0.547102.320401.73910HepG2MATR3
TUBG2ENSG00000037042.81267.40550631.201201.005609.048007.26560HepG2MTPAP
TUBG2ENSG00000037042.8634.61860396.914800.677002.817701.71520HepG2NONO
TUBG2ENSG00000037042.8974.83900548.758500.8289010.027208.67370HepG2NSUN2
TUBG2ENSG00000037042.81171.51580803.631700.543704.512303.60320HepG2PABPC4
TUBG2ENSG00000037042.8629.19730851.70950-0.436804.810704.04530HepG2PCBP1
TUBG2ENSG00000037042.8776.19540527.002800.558503.146402.04050HepG2PCBP2
TUBG2ENSG00000037042.8614.10390404.069200.603805.723503.97860HepG2PKM
TUBG2ENSG00000037042.8687.27000483.077000.508505.228104.24400HepG2PPIL4
TUBG2ENSG00000037042.8454.51030333.290700.447402.053901.35400HepG2PRPF8
TUBG2ENSG00000037042.81031.24280866.673400.250702.136201.64350HepG2PTBP1
TUBG2ENSG00000037042.81615.77930762.040901.084209.706808.68340HepG2PUF60
TUBG2ENSG00000037042.8596.59920808.95490-0.439305.313404.54550HepG2PUM1
TUBG2ENSG00000037042.8662.83330808.35480-0.286301.869501.31250HepG2PUM2
TUBG2ENSG00000037042.81232.79580729.189200.7575017.1630015.86320HepG2PUS1
TUBG2ENSG00000037042.81412.81170938.571000.589908.823007.80450HepG2QKI
TUBG2ENSG00000037042.8280.22080508.44830-0.859504.445703.56330HepG2RAVER1
TUBG2ENSG00000037042.81529.262801120.329800.448805.061103.94520HepG2RBM15
TUBG2ENSG00000037042.8400.88020942.89270-1.2339026.4191025.14650HepG2RBM22
TUBG2ENSG00000037042.8586.18220851.83530-0.539205.152504.25830HepG2RBM25
TUBG2ENSG00000037042.8669.60690316.604601.080503.366101.54980HepG2RBM39
TUBG2ENSG00000037042.8894.36150643.454500.474903.538102.78130HepG2RPLP0
TUBG2ENSG00000037042.8929.70800499.673300.895707.065405.60820HepG2RPS10
TUBG2ENSG00000037042.8612.90200475.487200.366202.219601.66240HepG2RPS19
TUBG2ENSG00000037042.81118.06840730.981700.613004.030403.06390HepG2RPS3A
TUBG2ENSG00000037042.8869.82240482.323400.8506016.8488015.45490HepG2SAFB2
TUBG2ENSG00000037042.8429.17980612.55130-0.513203.630902.83170HepG2SF3B1
TUBG2ENSG00000037042.8732.61050902.27030-0.300502.479101.91450HepG2SF3B4
TUBG2ENSG00000037042.8951.35410730.708800.380604.756003.87470HepG2SLBP
TUBG2ENSG00000037042.8701.98120519.077300.435402.253201.39790HepG2SMNDC1
TUBG2ENSG00000037042.8741.91990311.595301.251504.702602.89230HepG2SNRNP200
TUBG2ENSG00000037042.8537.257701064.93900-0.9871024.0450022.94590HepG2SRFBP1
TUBG2ENSG00000037042.8682.57530941.79470-0.464405.319804.71830HepG2SRSF1
TUBG2ENSG00000037042.8524.45110766.21720-0.546906.870706.07070HepG2SRSF9
TUBG2ENSG00000037042.81566.78120924.577800.7608019.0070017.92060HepG2SSB
TUBG2ENSG00000037042.81037.86240636.094000.706204.895903.38980HepG2STIP1
TUBG2ENSG00000037042.8858.94900430.183100.997509.692908.55520HepG2SUPV3L1
TUBG2ENSG00000037042.8991.58480846.576800.228001.790701.32040HepG2TAF15
TUBG2ENSG00000037042.8912.27800603.247900.596605.539204.56650HepG2TARDBP
TUBG2ENSG00000037042.81013.93450777.830400.382303.399502.47700HepG2TIA1
TUBG2ENSG00000037042.8993.56550526.207400.9169013.5032012.54050HepG2TIAL1
TUBG2ENSG00000037042.8654.18860530.993300.300901.900001.41510HepG2TRIM56
TUBG2ENSG00000037042.8693.73100362.265800.937202.645901.68010HepG2U2AF2
TUBG2ENSG00000037042.81030.36490788.063600.386702.433101.65170HepG2UBE2L3
TUBG2ENSG00000037042.8378.17580254.105500.573503.170602.35990HepG2UCHL5
TUBG2ENSG00000037042.81211.74160961.477300.333704.036603.21710HepG2UPF1
TUBG2ENSG00000037042.8770.69510393.850900.968407.130105.47070HepG2UPF2
TUBG2ENSG00000037042.8900.35030423.468801.0881012.5882011.06620HepG2XRN2
TUBG2ENSG00000037042.81053.67450763.985900.463706.695105.72510HepG2ZC3H8
TUBG2ENSG00000037042.81211.569601057.440800.196201.918901.44100HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TUBG2 is not available on ENCORE database.





12 RBPs can affect the splicing of TUBG2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETUBG2ENSG00000037042.8chr17+408149904081507040812656408127254081539440815521-0.187000.001040.02121excludedHepG2U2AF1
SETUBG2ENSG00000037042.8chr17+408149904081507040812656408127254081539440815521-0.269000.000030.00069excludedHepG2U2AF2
SETUBG2ENSG00000037042.8chr17+408149904081507040812656408127254081539440815521-0.142000.001610.07957excludedHepG2NCBP2
SETUBG2ENSG00000037042.8chr17+408149904081507040812656408127254081539440815521-0.366000.000730.04683excludedHepG2FTO
SETUBG2ENSG00000037042.8chr17+4081499040815070408126564081272540815394408155210.155000.000000.00071includedHepG2RBM15
SETUBG2ENSG00000037042.8chr17+408149904081507040812656408127254081539440815521-0.201000.000270.02592excludedHepG2IGF2BP3
SETUBG2ENSG00000037042.8chr17+408149904081507040812656408127254081539440815521-0.258000.000020.00158excludedHepG2PCBP1
SETUBG2ENSG00000037042.8chr17+4081499040815070408126564081272540815394408155210.128000.003110.09993includedHepG2HNRNPU
A5SSTUBG2ENSG00000037042.8chr17+4081216640812385408121664081233440812656408127250.111000.000060.00681longerHepG2HNRNPK
A5SSTUBG2ENSG00000037042.8chr17+4081216640812385408121664081233440812656408127250.128000.000300.03717longerHepG2PCBP1
A5SSTUBG2ENSG00000037042.8chr17+4081216640812385408121664081233440812656408127250.148000.000000.00111longerHepG2MATR3
RITUBG2ENSG00000037042.8chr17+4081265640813409408126564081272540813218408134090.127000.002160.04710includedHepG2FTO
RITUBG2ENSG00000037042.8chr17+408126564081340940812656408127254081321840813409-0.290000.002250.04706excludedHepG2SRSF1
RITUBG2ENSG00000037042.8chr17+4081265640813409408126564081272540813218408134090.326000.001930.03374includedHepG2FUBP3
MXETUBG2ENSG00000037042.8chr17+4081293140813101408138354081397440812656408127254081499040815070-0.125000.001890.059342includedHepG2NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TUBG2 is not avaliable on ENCORE database.