GABARAPL2

General Information

Gene Name       : GABARAPL2
Gene ID             : ENSG00000034713.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GABARAPL2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GABARAPL2ENSG00000034713.786.5273.8080.16ENCSR000AEF
HepG2GABARAPL2ENSG00000034713.760.6682.8871.77ENCSR985KAT
K562GABARAPL2ENSG00000034713.768.0059.3563.67ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GABARAPL2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GABARAPL2 RNA is bound by 17 proteins.  







eCLIP assay for GABARAPL2 is not avaliable on ENCORE database.





17 proteins are bound to GABARAPL2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr167561134275611440+3'-UTR,polyA_signal4.131973.98716K562IGF2BP1
chr167561133075611378+3'-UTR3.525694.65197HepG2LARP4
chr167561146475611528+3'-UTR3.6826217.62128K562TIA1
chr167561145775611515+3'-UTR5.343519.58469HepG2TIAL1
chr167561143475611464+3'-UTR4.418785.20806K562TIA1
chr167561125875611353+3'-UTR,CDS4.4042440.88642K562PUM2
chr167561155175611635+3'-UTR4.434243.90287K562LIN28B
chr167561148175611521+3'-UTR4.1782210.83280HepG2DDX55
chr167561153375611617+3'-UTR4.199656.59840HepG2LARP4
chr167561140675611434+3'-UTR,polyA_signal3.532844.02462K562TIA1
chr167560207575602150+3'-UTR,CDS,intron-Distal,intron-Proximal4.180265.64484HepG2PRPF8
chr167561146375611481+3'-UTR3.461758.30445HepG2DDX55
chr167561121675611310+3'-UTR,CDS4.208789.14789K562RPS3
chr167561155775611627+3'-UTR4.207078.97449HepG2SUB1
chr167561144175611516+3'-UTR3.5723514.73488HepG2SUB1
chr167561153575611617+3'-UTR4.814764.34551K562ZC3H11A
chr167560041875600517+5'-UTR,intron-Proximal4.0787215.87170K562AQR
chr167560027475600418+5'-UTR,CDS3.251338.29298HepG2DDX3X
chr167560037675600419+5'-UTR,CDS,intron-Proximal3.3578012.85699K562DDX3X
chr167560072575600803+5'-UTR,CDS,intron-Proximal3.990446.33304K562BUD13
chr167560051775600566+5'-UTR,intron-Distal,intron-Proximal4.245488.61602K562AQR
chr167560027975600315+5'-UTR4.568726.42503K562DDX3X
chr167560040475600521+5'-UTR,CDS,intron-Distal,intron-Proximal4.182495.56912HepG2AQR
chr167560074775600806+5'-UTR,CDS,intron-Proximal3.413454.88723K562FTO
chr167560030975600409+5'-UTR,CDS3.619855.44241K562DROSHA
chr167560031575600376+5'-UTR4.5893322.15910K562DDX3X
chr167560072175600803+5'-UTR,CDS,intron-Proximal4.285727.26476HepG2AQR
chr167560078475600838+5'-UTR,CDS,intron-Proximal3.320244.71929HepG2PRPF8
chr167560030775600373+5'-UTR4.1131516.64089HepG2SUB1
chr167560196975602052+5'-UTR,CDS,intron-Distal3.715957.39718K562SND1
chr167560077775600806+5'-UTR,CDS,intron-Proximal3.609237.89340K562DDX3X
chr167560193475601980+5'-UTR,CDS,intron-Distal,intron-Proximal3.130287.84704K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GABARAPL2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GABARAPL2 is not available on ENCORE database.

  • 83 RBPs can affect the levels of GABARAPL2.  








The Knockdown/knockout RNA-Seq assay for GABARAPL2 is not available on ENCORE database.





83 RBPs can affect the gene expression of GABARAPL2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GABARAPL2ENSG00000034713.3881.098701034.25900-0.231202.090101.54730HepG2ACO1
GABARAPL2ENSG00000034713.33040.732402320.303900.390002.538402.02730HepG2AKAP1
GABARAPL2ENSG00000034713.31927.674701603.170000.265803.015302.30370HepG2AUH
GABARAPL2ENSG00000034713.3987.08260513.670600.9422013.2816012.10540HepG2BOP1
GABARAPL2ENSG00000034713.3956.54620692.951500.465004.683303.71210HepG2CALR
GABARAPL2ENSG00000034713.31306.391701034.060100.337204.678603.85760HepG2CKAP4
GABARAPL2ENSG00000034713.3687.46580471.581500.543704.009303.19570HepG2CPSF6
GABARAPL2ENSG00000034713.31090.925001429.02560-0.389505.161904.33350HepG2CELF1
GABARAPL2ENSG00000034713.31068.31460858.043000.316102.079301.48200HepG2DDX21
GABARAPL2ENSG00000034713.33226.123202222.869300.537305.650704.78630HepG2DDX3X
GABARAPL2ENSG00000034713.32389.077201909.034700.323502.006301.47300HepG2DDX6
GABARAPL2ENSG00000034713.31192.83900989.512300.269502.568701.91320HepG2DKC1
GABARAPL2ENSG00000034713.3440.76260612.15880-0.473902.727201.83090HepG2EIF3D
GABARAPL2ENSG00000034713.31880.727301452.179800.373002.533301.75170HepG2EIF4G2
GABARAPL2ENSG00000034713.31030.94190817.950900.333802.543501.44220HepG2FASTKD2
GABARAPL2ENSG00000034713.31504.426302046.34430-0.443802.246101.62050HepG2FXR1
GABARAPL2ENSG00000034713.3326.24510545.05280-0.740405.732904.44050HepG2GEMIN5
GABARAPL2ENSG00000034713.31810.023001412.201100.358004.809003.63010HepG2HNRNPA2B1
GABARAPL2ENSG00000034713.31308.91660949.050000.463704.339003.48570HepG2HNRNPC
GABARAPL2ENSG00000034713.3740.252901174.39430-0.665805.086203.03300HepG2HNRNPD
GABARAPL2ENSG00000034713.31353.578201921.72420-0.505603.526902.74340HepG2HNRNPK
GABARAPL2ENSG00000034713.31258.70230874.273700.525703.687402.26570HepG2HSPD1
GABARAPL2ENSG00000034713.31459.707601930.04290-0.403002.065601.47290HepG2IGF2BP2
GABARAPL2ENSG00000034713.3747.852101004.28910-0.425302.900501.65580HepG2LIN28B
GABARAPL2ENSG00000034713.31353.971202047.05580-0.596404.147103.34690HepG2MAGOH
GABARAPL2ENSG00000034713.3341.88750830.66520-1.280708.012706.11940HepG2NONO
GABARAPL2ENSG00000034713.31757.600001239.228500.504102.516401.67700HepG2PABPC1
GABARAPL2ENSG00000034713.31311.400001877.00180-0.517302.853302.12140HepG2PABPC4
GABARAPL2ENSG00000034713.31283.262101916.87640-0.5789011.7877010.67490HepG2PCBP1
GABARAPL2ENSG00000034713.3381.53340506.23730-0.408002.679601.46860HepG2PKM
GABARAPL2ENSG00000034713.3915.15360698.254200.390202.838702.01910HepG2PRPF8
GABARAPL2ENSG00000034713.31367.124301950.39960-0.512607.367206.55920HepG2PTBP1
GABARAPL2ENSG00000034713.3545.14180862.39440-0.661702.752102.04940HepG2RAVER1
GABARAPL2ENSG00000034713.32219.217201538.446800.528509.499608.66930HepG2RBM22
GABARAPL2ENSG00000034713.3712.390101152.96150-0.694606.675005.12720HepG2RBM27
GABARAPL2ENSG00000034713.31326.922802170.68540-0.7101011.8523010.88240HepG2NELFE
GABARAPL2ENSG00000034713.31320.819802021.55720-0.6140013.5758012.36760HepG2RECQL
GABARAPL2ENSG00000034713.31271.16290899.377700.499005.252004.35040HepG2RPLP0
GABARAPL2ENSG00000034713.3451.68510595.64510-0.399102.565601.97170HepG2RPS19
GABARAPL2ENSG00000034713.31153.84690690.741200.740107.592306.37150HepG2RRP9
GABARAPL2ENSG00000034713.3996.75490839.568800.247502.313001.71540HepG2SAFB2
GABARAPL2ENSG00000034713.3699.10670504.967200.469203.423502.64600HepG2SF3B1
GABARAPL2ENSG00000034713.3703.449602030.78590-1.5295044.6047042.77910HepG2SF3B4
GABARAPL2ENSG00000034713.31358.04590561.862301.273109.966808.48930HepG2SNRNP70
GABARAPL2ENSG00000034713.32972.797301737.618500.7746028.7664027.59270HepG2SRFBP1
GABARAPL2ENSG00000034713.31440.457802119.63220-0.557309.169108.42040HepG2SRSF1
GABARAPL2ENSG00000034713.3768.85700543.328900.500802.848201.83050HepG2SRSF3
GABARAPL2ENSG00000034713.31492.409001724.37460-0.208402.381401.86200HepG2SRSF9
GABARAPL2ENSG00000034713.31778.696701508.663300.237402.749402.23770HepG2SSB
GABARAPL2ENSG00000034713.31167.10490871.091600.421902.823501.52980HepG2SSRP1
GABARAPL2ENSG00000034713.31401.454901633.28020-0.220801.937701.40000HepG2SUCLG1
GABARAPL2ENSG00000034713.31479.85480900.830600.716007.908006.85890HepG2SUPV3L1
GABARAPL2ENSG00000034713.31553.660901905.01770-0.294103.503602.88600HepG2TAF15
GABARAPL2ENSG00000034713.3669.01390497.223000.428002.869302.13240HepG2TARDBP
GABARAPL2ENSG00000034713.31257.75070915.998100.457303.712203.15080HepG2TIAL1
GABARAPL2ENSG00000034713.3815.15060532.195400.615005.779404.67220HepG2UCHL5
GABARAPL2ENSG00000034713.3769.17640558.268200.462305.484704.59040HepG2ZC3H8
GABARAPL2ENSG00000034713.31000.99360854.504300.228202.185001.68230HepG2ZNF622
GABARAPL2ENSG00000034713.31939.006701324.888000.5493011.6637010.59260K562AGGF1
GABARAPL2ENSG00000034713.31968.489001455.908200.435104.769203.39290K562AKAP8
GABARAPL2ENSG00000034713.32024.044201378.619900.553906.471105.44050K562AKAP8L
GABARAPL2ENSG00000034713.3773.46640605.699800.352602.073401.32390K562BOP1
GABARAPL2ENSG00000034713.31161.245201735.83620-0.580003.330902.14510K562CNOT7
GABARAPL2ENSG00000034713.3236.49180483.10320-1.030502.443201.50270K562EIF3A
GABARAPL2ENSG00000034713.3702.51830990.09000-0.495003.095601.99860K562EIF3D
GABARAPL2ENSG00000034713.3818.804301116.26910-0.447105.450804.34720K562EIF3G
GABARAPL2ENSG00000034713.3824.753601223.53310-0.569006.186304.96840K562EIF4A3
GABARAPL2ENSG00000034713.3896.858501101.88290-0.297002.536601.44750K562EIF4B
GABARAPL2ENSG00000034713.31115.51700862.482000.371002.234401.47130K562FIP1L1
GABARAPL2ENSG00000034713.31053.499901272.42740-0.272402.444801.86910K562FXR1
GABARAPL2ENSG00000034713.3749.936501029.07100-0.456505.114003.59010K562GLRX3
GABARAPL2ENSG00000034713.3673.910801030.93810-0.613306.794505.89810K562HNRNPC
GABARAPL2ENSG00000034713.3662.68480920.50010-0.474104.174202.74090K562HNRNPF
GABARAPL2ENSG00000034713.31153.48620709.401600.701202.488801.60810K562HNRNPM
GABARAPL2ENSG00000034713.32148.705501463.011500.554406.302704.94080K562KIF1C
GABARAPL2ENSG00000034713.3639.871001045.33170-0.708107.166704.62950K562LIN28B
GABARAPL2ENSG00000034713.31298.786201631.31200-0.328902.886102.02630K562MAGOH
GABARAPL2ENSG00000034713.31832.048101400.501600.387403.622302.33750K562MAK16
GABARAPL2ENSG00000034713.3902.393201081.94590-0.261801.994001.30200K562MTPAP
GABARAPL2ENSG00000034713.31787.055401148.789000.637405.319303.95630K562NAA15
GABARAPL2ENSG00000034713.3994.264101202.07240-0.273803.220602.42040K562NSUN2
GABARAPL2ENSG00000034713.31220.21010979.084600.317502.190001.46400K562PPIG
GABARAPL2ENSG00000034713.31162.24970899.681000.369302.782702.03100K562PRPF8
GABARAPL2ENSG00000034713.33305.565901367.113201.2737031.4428029.58770K562PUS1
GABARAPL2ENSG00000034713.31963.213201332.128300.559409.883408.79000K562RBM15
GABARAPL2ENSG00000034713.31175.558301519.92180-0.370703.156902.25400K562RBM22
GABARAPL2ENSG00000034713.3500.52890843.13850-0.752308.587306.83830K562RCC2
GABARAPL2ENSG00000034713.3368.73080579.86680-0.653205.626304.08040K562SAFB
GABARAPL2ENSG00000034713.3844.189601274.50360-0.594307.782506.30550K562SF3B4
GABARAPL2ENSG00000034713.3485.32790799.29070-0.719804.766803.31150K562SRFBP1
GABARAPL2ENSG00000034713.31279.350001553.68490-0.280302.276201.62710K562SRSF1
GABARAPL2ENSG00000034713.3497.27570652.74730-0.392502.995502.13610K562SYNCRIP
GABARAPL2ENSG00000034713.3693.57480889.05080-0.358202.111901.30580K562TIAL1
GABARAPL2ENSG00000034713.3645.37600944.30860-0.549105.104303.72540K562TRIM56
GABARAPL2ENSG00000034713.31008.261201274.58810-0.338202.582801.88800K562UPF1
GABARAPL2ENSG00000034713.32027.560502495.37720-0.299502.545601.72440K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GABARAPL2 is not available on ENCORE database.





2 RBPs can affect the splicing of GABARAPL2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGABARAPL2ENSG00000034713.3chr16+756019347560210775600749756008057561117675611428-0.080000.000000.00000excludedK562SRSF1
A3SSGABARAPL2ENSG00000034713.3chr16+756019347560210775601949756021077560074975600805-0.105000.000000.00000shorterK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GABARAPL2 is not avaliable on ENCORE database.