MRPL43

General Information

Gene Name       : MRPL43
Gene ID             : ENSG00000055950.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MRPL43)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPL43ENSG00000055950.1610.0216.8613.44ENCSR000AEF
HepG2MRPL43ENSG00000055950.1672.6828.7150.70ENCSR985KAT
K562MRPL43ENSG00000055950.1636.4619.5928.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPL43 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPL43 RNA is bound by 6 proteins.  







eCLIP assay for MRPL43 is not avaliable on ENCORE database.





6 proteins are bound to MRPL43 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10102729357102729467-3'-UTR,intron-Distal3.243073.20756HepG2UPF1
chr10102746698102746733-3'-UTR,CDS,intron-Distal,intron-Proximal3.849903.86978K562YBX3
chr10102746398102746469-3'-UTR,intron-Distal,intron-Proximal3.004293.88666HepG2LARP4
chr10102746090102746132-3'-UTR,intron-Distal4.099814.01795HepG2LARP4
chr10102746691102746734-3'-UTR,CDS,intron-Distal,intron-Proximal5.5547113.66853K562LIN28B
chr10102746706102746814-3'-UTR,CDS,intron-Distal,intron-Proximal4.455117.92018K562AQR
chr10102746282102746345-3'-UTR,CDS,intron-Distal,intron-Proximal3.450034.74431HepG2LARP4
chr10102746699102746772-3'-UTR,CDS,intron-Distal,intron-Proximal5.061996.38747HepG2AQR
chr10102746679102746733-3'-UTR,CDS,intron-Distal,intron-Proximal4.846704.60263HepG2LIN28B
chr10102747069102747217-5'-UTR,CDS,intron-Distal,intron-Proximal3.294065.28366HepG2LARP4
chr10102747139102747231-5'-UTR,CDS,intron-Distal,intron-Proximal5.533956.26070K562DDX3X
chr10102747146102747219-5'-UTR,CDS,intron-Distal,intron-Proximal4.105274.82666HepG2DDX3X
chr10102746914102746972-CDS,intron-Distal,intron-Proximal3.513634.46401K562DDX3X
chr10102746845102746903-CDS,intron-Distal,intron-Proximal3.986227.24705K562LIN28B
chr10102747070102747124-CDS,intron-Distal,intron-Proximal3.579254.46401K562DDX3X
chr10102747067102747100-CDS,intron-Distal,intron-Proximal5.266233.15149HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPL43 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPL43 is not available on ENCORE database.

  • 68 RBPs can affect the levels of MRPL43.  








The Knockdown/knockout RNA-Seq assay for MRPL43 is not available on ENCORE database.





68 RBPs can affect the gene expression of MRPL43 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPL43ENSG00000055950.12971.93040684.988600.504703.102302.10290HepG2ABCF1
MRPL43ENSG00000055950.12994.16490586.181500.762006.563505.78290HepG2AKAP1
MRPL43ENSG00000055950.12589.31830768.98880-0.383903.743902.96710HepG2AUH
MRPL43ENSG00000055950.12784.73840489.913800.679606.719905.83470HepG2BOP1
MRPL43ENSG00000055950.12307.40400410.77500-0.418201.987101.32440HepG2CALR
MRPL43ENSG00000055950.12415.27180257.770800.687903.232402.40060HepG2CNOT7
MRPL43ENSG00000055950.12208.93620294.20440-0.493802.474801.61400HepG2DDX24
MRPL43ENSG00000055950.12386.39430254.022600.605002.629401.94030HepG2DNAJC21
MRPL43ENSG00000055950.12364.76480251.814900.534504.320203.53830HepG2DNAJC2
MRPL43ENSG00000055950.12503.34730363.068100.471202.432001.56510HepG2EEF2
MRPL43ENSG00000055950.12170.89860276.83880-0.695903.303202.08390HepG2AGO1
MRPL43ENSG00000055950.12717.01100517.071200.471503.100902.36840HepG2FXR1
MRPL43ENSG00000055950.12363.57200262.380900.470502.412901.58160HepG2GEMIN5
MRPL43ENSG00000055950.12179.10520298.04610-0.734702.897301.48610HepG2HLTF
MRPL43ENSG00000055950.12541.56780385.469500.490404.640903.78470HepG2HNRNPL
MRPL43ENSG00000055950.12727.36570532.369200.450202.708002.08120HepG2NCBP2
MRPL43ENSG00000055950.12592.15500419.606200.496804.243003.29890HepG2NOL12
MRPL43ENSG00000055950.12400.47230207.424600.949005.548403.54810HepG2NOLC1
MRPL43ENSG00000055950.12384.21080243.713800.656604.805903.20050HepG2PKM
MRPL43ENSG00000055950.12373.75350252.755100.564204.188803.30100HepG2PPIL4
MRPL43ENSG00000055950.12345.48840425.19950-0.299501.804001.30240HepG2PUM1
MRPL43ENSG00000055950.12322.11920198.128700.701103.686901.66200HepG2RBM14
MRPL43ENSG00000055950.12497.44510272.812300.866502.771001.77830HepG2RBM27
MRPL43ENSG00000055950.12397.83310221.538500.844502.317001.34970HepG2RCC2
MRPL43ENSG00000055950.12384.97550286.786900.424702.198301.64350HepG2RPS19
MRPL43ENSG00000055950.12494.67780251.553900.975503.998603.04530HepG2RPS2
MRPL43ENSG00000055950.12373.28140259.088900.526702.373501.62930HepG2RPS3A
MRPL43ENSG00000055950.12509.60770252.360301.0138013.6091012.34140HepG2SAFB2
MRPL43ENSG00000055950.12835.04540588.335300.505102.864102.17780HepG2SF3A3
MRPL43ENSG00000055950.12361.19250481.56990-0.415002.199201.56490HepG2SF3B1
MRPL43ENSG00000055950.12513.72630384.061400.419603.473302.70220HepG2SLBP
MRPL43ENSG00000055950.12501.16890294.283100.768009.494808.41690HepG2SMN1
MRPL43ENSG00000055950.12480.52040289.648900.730204.674203.39790HepG2SMNDC1
MRPL43ENSG00000055950.12388.41970203.045300.935702.615901.35540HepG2SNRNP200
MRPL43ENSG00000055950.12751.52340535.833700.487902.260901.55780HepG2SNRNP70
MRPL43ENSG00000055950.12679.09050833.49480-0.295602.749202.24830HepG2SRFBP1
MRPL43ENSG00000055950.12601.99050395.482500.606006.712905.79490HepG2SRSF5
MRPL43ENSG00000055950.12648.48400449.774100.527805.786904.94720HepG2SUCLG1
MRPL43ENSG00000055950.12305.60290479.30780-0.649305.271304.53860HepG2TAF15
MRPL43ENSG00000055950.12324.91560440.36140-0.438602.752201.91800HepG2TIA1
MRPL43ENSG00000055950.12416.54400275.317800.597304.479303.87510HepG2TIAL1
MRPL43ENSG00000055950.12440.75040277.826200.665706.531805.73100HepG2TRIM56
MRPL43ENSG00000055950.12612.60630391.317400.646505.915104.57330HepG2TUFM
MRPL43ENSG00000055950.12258.69440173.467900.576502.112601.45040HepG2UCHL5
MRPL43ENSG00000055950.12374.45190521.76120-0.478604.231403.39740HepG2UPF1
MRPL43ENSG00000055950.12522.74730289.137500.854303.851803.00490HepG2XRN2
MRPL43ENSG00000055950.12575.15920438.006500.392903.218002.61390K562AGGF1
MRPL43ENSG00000055950.12592.83890455.773200.379202.502401.88060K562AKAP8L
MRPL43ENSG00000055950.12847.87270502.386400.755007.903406.99660K562AQR
MRPL43ENSG00000055950.12463.56710324.029300.516603.402902.45470K562FIP1L1
MRPL43ENSG00000055950.12392.46310269.595600.541702.408701.83700K562FXR1
MRPL43ENSG00000055950.12599.05250468.667800.354002.072301.41130K562GRSF1
MRPL43ENSG00000055950.12435.62210266.530600.708704.667203.42890K562HNRNPM
MRPL43ENSG00000055950.12603.59900439.298400.458303.025402.19420K562HSPD1
MRPL43ENSG00000055950.12202.25590291.34900-0.526602.687101.32290K562LARP7
MRPL43ENSG00000055950.12282.78040204.754700.465702.368601.58820K562MAGOH
MRPL43ENSG00000055950.12687.01660541.828300.342402.435301.58980K562MBNL1
MRPL43ENSG00000055950.12286.51390439.98820-0.618904.498903.48920K562MTPAP
MRPL43ENSG00000055950.12586.33950367.854400.672505.723604.47080K562PPIG
MRPL43ENSG00000055950.12299.30480170.557600.811304.606803.63990K562PRPF8
MRPL43ENSG00000055950.12299.10380198.928800.588303.634502.88490K562PTBP1
MRPL43ENSG00000055950.12454.55490743.18470-0.709308.633806.66500K562PUM1
MRPL43ENSG00000055950.12708.65640451.948200.648803.181002.60570K562PUS1
MRPL43ENSG00000055950.12612.80920440.399900.476504.217203.50140K562RBM15
MRPL43ENSG00000055950.12256.27800173.721800.560802.070101.36820K562RPS19
MRPL43ENSG00000055950.12243.47200159.183000.613002.346601.43310K562RPS3
MRPL43ENSG00000055950.12469.14060268.195100.806607.109605.38740K562SAFB
MRPL43ENSG00000055950.12308.50510195.011600.661604.085703.23300K562SRSF1
MRPL43ENSG00000055950.12249.13350153.671600.697003.360402.18600K562SRSF4
MRPL43ENSG00000055950.12292.33040425.12970-0.540303.202201.72320K562SSRP1
MRPL43ENSG00000055950.12281.02900197.375000.509702.437501.77060K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPL43 is not available on ENCORE database.





1 RBPs can affect the splicing of MRPL43 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSMRPL43ENSG00000055950.12chr10-1027468461027470011027468461027469531027470691027472400.097000.005200.02992longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPL43 is not avaliable on ENCORE database.