RAD52

General Information

Gene Name : RAD52
Gene ID : ENSG00000002016.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RAD52)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RAD52	ENSG00000002016.17	3.71	5.81	4.76	ENCSR000AEF
HepG2	RAD52	ENSG00000002016.17	14.46	14.56	14.51	ENCSR985KAT
K562	RAD52	ENSG00000002016.17	5.21	6.82	6.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RAD52 is not avaliable on ENCORE database.

Proteins bound to RNA

RAD52 RNA is bound by 11 proteins.

eCLIP assay for RAD52 is not avaliable on ENCORE database.

11 proteins are bound to RAD52 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	1023059	1023116	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.54314	5.82083	HepG2	GRWD1
chr12	1023234	1023305	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.85909	5.60471	HepG2	U2AF2
chr12	1025456	1025561	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.72943	9.86479	HepG2	PPIG
chr12	1039072	1039116	-	3'-UTR,intron-Distal,intron-Proximal	4.55314	5.98353	HepG2	EFTUD2
chr12	1034670	1034692	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.38441	4.50440	HepG2	PPIG
chr12	1036267	1036348	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.30223	8.44604	HepG2	PRPF8
chr12	1025798	1025894	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48523	6.00907	HepG2	PPIG
chr12	1022391	1022485	-	3'-UTR,intron-Distal,intron-Proximal	4.67720	3.74454	K562	ZC3H11A
chr12	1036401	1036430	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.22345	3.05161	HepG2	PPIG
chr12	1025382	1025487	-	3'-UTR,intron-Distal,intron-Proximal	4.73811	8.42614	HepG2	EFTUD2
chr12	1039049	1039132	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.60058	7.03763	K562	EFTUD2
chr12	1025451	1025548	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.70995	19.46809	HepG2	PRPF8
chr12	1025893	1025958	-	3'-UTR,CDS,intron-Distal	3.24865	3.07653	K562	ZNF622
chr12	1025798	1025881	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.02880	5.22569	HepG2	GRWD1
chr12	1023116	1023207	-	3'-UTR,CDS,intron-Distal	3.74256	6.23335	HepG2	GRWD1
chr12	1021854	1021892	-	3'-UTR,intron-Distal,intron-Proximal	3.00176	3.07694	HepG2	HNRNPC
chr12	1025383	1025429	-	3'-UTR,intron-Distal,intron-Proximal	4.17666	3.02457	HepG2	BCLAF1
chr12	1038871	1038994	-	CDS,intron-Distal,intron-Proximal	4.70652	22.36226	HepG2	EFTUD2
chr12	1040380	1040486	-	CDS,intron-Distal,intron-Proximal	4.27871	10.72269	HepG2	PPIG
chr12	1038948	1039034	-	CDS,intron-Distal,intron-Proximal	4.16721	5.52342	HepG2	PPIG
chr12	1038926	1039001	-	CDS,intron-Distal,intron-Proximal	4.45173	5.34978	HepG2	PRPF8
chr12	1038842	1038952	-	CDS,intron-Distal,intron-Proximal	4.99387	9.40065	K562	EFTUD2
chr12	1048218	1048288	-	intron-Distal	4.64136	3.19026	HepG2	HNRNPL
chr12	1048080	1048198	-	intron-Distal	3.02695	5.65608	HepG2	HNRNPL
chr12	1034778	1034940	-	intron-Distal,intron-Proximal	4.04037	3.16986	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RAD52 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RAD52 is not available on ENCORE database.
37 RBPs can affect the levels of RAD52.

The Knockdown/knockout RNA-Seq assay for RAD52 is not available on ENCORE database.

37 RBPs can affect the gene expression of RAD52 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RAD52	ENSG00000002016.12	338.43310	214.08170	0.66060	2.69600	1.76520	HepG2	ABCF1
RAD52	ENSG00000002016.12	269.77070	385.73460	-0.51590	1.97110	1.33080	HepG2	CNOT7
RAD52	ENSG00000002016.12	348.02550	209.86890	0.72960	4.24190	3.45450	HepG2	EIF4A3
RAD52	ENSG00000002016.12	560.94480	435.81630	0.36400	2.84570	2.23740	HepG2	ETF1
RAD52	ENSG00000002016.12	173.23660	257.98980	-0.57460	2.93910	2.08080	HepG2	EWSR1
RAD52	ENSG00000002016.12	219.19350	122.77810	0.83610	4.42430	3.44400	HepG2	FUBP3
RAD52	ENSG00000002016.12	219.20710	357.12920	-0.70420	3.13690	1.94610	HepG2	GRSF1
RAD52	ENSG00000002016.12	204.59550	334.14080	-0.70770	3.78690	1.99910	HepG2	HNRNPD
RAD52	ENSG00000002016.12	311.19350	198.84480	0.64610	3.40600	2.63360	HepG2	HNRNPK
RAD52	ENSG00000002016.12	387.65240	211.78810	0.87200	6.14560	5.17520	HepG2	MAGOH
RAD52	ENSG00000002016.12	258.81120	357.53940	-0.46620	2.78200	2.01540	HepG2	NOL12
RAD52	ENSG00000002016.12	54.35940	126.16570	-1.21470	4.43050	2.42650	HepG2	PA2G4
RAD52	ENSG00000002016.12	161.18810	352.64730	-1.12950	6.10870	4.75430	HepG2	PABPC1
RAD52	ENSG00000002016.12	289.35820	197.44660	0.55130	2.73380	2.18890	HepG2	PTBP1
RAD52	ENSG00000002016.12	249.01640	362.31020	-0.54100	4.08450	3.39390	HepG2	PUM1
RAD52	ENSG00000002016.12	216.33260	362.04480	-0.74290	5.52670	4.59310	HepG2	PUM2
RAD52	ENSG00000002016.12	344.72790	213.80290	0.68910	4.84030	4.04840	HepG2	QKI
RAD52	ENSG00000002016.12	98.05730	222.84310	-1.18430	5.02260	4.08700	HepG2	RAVER1
RAD52	ENSG00000002016.12	741.04470	364.25750	1.02450	16.24280	15.19810	HepG2	RBM22
RAD52	ENSG00000002016.12	340.99800	219.72490	0.63400	4.15190	3.51320	HepG2	NELFE
RAD52	ENSG00000002016.12	272.00690	204.66980	0.41020	1.98250	1.44850	HepG2	RECQL
RAD52	ENSG00000002016.12	288.10010	187.88270	0.61660	2.51770	1.75230	HepG2	RPS2
RAD52	ENSG00000002016.12	266.94360	387.59930	-0.53800	2.48500	1.72520	HepG2	RPS3A
RAD52	ENSG00000002016.12	200.72850	364.98490	-0.86260	4.99960	3.23940	HepG2	SART3
RAD52	ENSG00000002016.12	103.77750	164.79890	-0.66720	2.38390	1.50860	HepG2	SERBP1
RAD52	ENSG00000002016.12	301.87520	205.53660	0.55450	3.33140	2.69010	HepG2	SF3B4
RAD52	ENSG00000002016.12	246.02150	327.25960	-0.41170	2.34590	1.69150	HepG2	SLBP
RAD52	ENSG00000002016.12	449.67120	214.54830	1.06750	12.68370	11.83120	HepG2	SRSF1
RAD52	ENSG00000002016.12	475.00260	357.18610	0.41120	3.01930	2.48870	HepG2	SSB
RAD52	ENSG00000002016.12	509.76090	192.87930	1.40200	21.98990	20.62100	HepG2	TAF15
RAD52	ENSG00000002016.12	242.42430	177.19270	0.45210	2.15740	1.41720	HepG2	TIA1
RAD52	ENSG00000002016.12	290.39020	213.02950	0.44680	2.16020	1.70740	HepG2	TIAL1
RAD52	ENSG00000002016.12	152.90580	214.91230	-0.49110	2.36800	1.83780	HepG2	TRIM56
RAD52	ENSG00000002016.12	230.02900	333.44130	-0.53560	2.91970	2.01940	HepG2	TUFM
RAD52	ENSG00000002016.12	164.70330	256.71140	-0.64030	3.64860	2.97700	HepG2	UTP3
RAD52	ENSG00000002016.12	180.03300	116.29440	0.63040	2.52650	1.74270	K562	EIF4A3
RAD52	ENSG00000002016.12	181.11060	301.00570	-0.73290	4.25000	2.37850	K562	NOL12
RAD52	ENSG00000002016.12	104.07900	162.08620	-0.63910	2.49460	1.71750	K562	SF3A3
RAD52	ENSG00000002016.12	55.72970	111.83210	-1.00480	3.39360	2.15530	K562	U2AF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RAD52 is not available on ENCORE database.

7 RBPs can affect the splicing of RAD52 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RAD52	ENSG00000002016.12	chr12	-	1035961	1036112	1034615	1034691	1036310	1036429	0.62200	0.00414	0.09084	included	K562	AKAP8L
RI	RAD52	ENSG00000002016.12	chr12	-	1025509	1025986	1025509	1025649	1025804	1025986	0.39300	0.00946	0.08165	included	HepG2	SF3A3
RI	RAD52	ENSG00000002016.12	chr12	-	1038929	1039310	1038929	1039052	1039216	1039310	-0.39900	0.00387	0.06948	excluded	K562	SRSF1
RI	RAD52	ENSG00000002016.12	chr12	-	1038929	1039310	1038929	1039052	1039216	1039310	0.39600	0.00003	0.00170	included	HepG2	FTO
RI	RAD52	ENSG00000002016.12	chr12	-	1038929	1039310	1038929	1039052	1039216	1039310	0.49500	0.00037	0.00581	included	HepG2	QKI
RI	RAD52	ENSG00000002016.12	chr12	-	1038929	1039310	1038929	1039052	1039216	1039310	0.42100	0.00060	0.00782	included	HepG2	TAF15
RI	RAD52	ENSG00000002016.12	chr12	-	1035961	1036429	1035961	1036112	1036310	1036429	0.64300	0.00079	0.01036	included	HepG2	RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RAD52

General Information

Functions

Localization

Domains (AlphaFold: RAD52)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RAD52 is not avaliable on ENCORE database.

11 proteins are bound to RAD52 RNA:

eCLIP assay for RAD52 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RAD52 is not available on ENCORE database.

37 RBPs can affect the gene expression of RAD52 :

The Knockdown/knockout RNA-Seq assay for RAD52 is not available on ENCORE database.

7 RBPs can affect the splicing of RAD52 :

The Knockdown/knockout RNA-Seq assay for RAD52 is not avaliable on ENCORE database.