SLC30A9

General Information

Gene Name       : SLC30A9
Gene ID             : ENSG00000014824.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC30A9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC30A9ENSG00000014824.1339.1232.4035.76ENCSR000AEF
HepG2SLC30A9ENSG00000014824.1317.9530.3424.14ENCSR985KAT
K562SLC30A9ENSG00000014824.1333.0234.7133.87ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC30A9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC30A9 RNA is bound by 13 proteins.  







eCLIP assay for SLC30A9 is not avaliable on ENCORE database.





13 proteins are bound to SLC30A9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr44206915742069210+3'-UTR,CDS,intron-Proximal3.003113.58614K562YBX3
chr44207256442072635+3'-UTR,CDS,intron-Distal4.216639.87549K562LIN28B
chr44208842042088469+3'-UTR3.476003.34495K562IGF2BP1
chr44206907942069123+3'-UTR,CDS,intron-Proximal3.367623.16095HepG2U2AF2
chr44207254242072621+3'-UTR,CDS,intron-Distal,intron-Proximal3.525304.74241K562YBX3
chr44208830642088372+3'-UTR3.624935.48238K562IGF2BP1
chr44208818242088202+3'-UTR4.161853.67607K562YBX3
chr44208908942089133+3'-UTR3.363617.71325K562PUM2
chr44208914542089180+3'-UTR4.266545.12038K562PUM2
chr44208846942088526+3'-UTR5.019449.16597K562IGF2BP1
chr44206512742065238+3'-UTR,CDS,intron-Proximal3.405173.54718K562PRPF8
chr44208939742089462+3'-UTR3.191293.29348K562YBX3
chr44206218442062252+3'-UTR,CDS,intron-Proximal4.145828.64802HepG2U2AF2
chr44202531742025368+5'-UTR,CDS,intron-Proximal3.565886.36847HepG2BCLAF1
chr44199264541992706+5'-UTR,CDS5.690235.29846HepG2DDX3X
chr44202247942022530+5'-UTR,CDS3.353485.15500HepG2BCLAF1
chr44199255641992780+5'-UTR,CDS,intron-Proximal3.8637113.39743K562DDX3X
chr44199254441992645+5'-UTR5.0479511.72256HepG2DDX3X
chr44202491442024949+5'-UTR,CDS,intron-Proximal3.088873.45280HepG2BCLAF1
chr44199276141992817+CDS,intron-Proximal3.255576.46344HepG2PRPF8
chr44199270641992773+CDS4.877434.66990HepG2DDX3X
chr44201860242018721+intron-Distal3.977584.14103K562KHSRP
chr44201985442019963+intron-Distal3.233064.08064K562KHSRP
chr44200650442006598+intron-Distal3.792113.09122HepG2PTBP1
chr44201999442020082+intron-Distal,intron-Proximal3.495405.20123K562KHSRP
chr44205467442054736+intron-Distal3.529354.16915HepG2HLTF
chr44208076342080880+intron-Distal4.179073.75546HepG2KHSRP
chr44200578842005843+intron-Distal4.232123.42734K562PTBP1
chr44206750442067612+intron-Distal3.171035.14345HepG2KHSRP
chr44206868142068740+intron-Distal,intron-Proximal3.870743.20552HepG2KHSRP
chr44206841442068487+intron-Distal,intron-Proximal3.301914.10408K562KHSRP
chr44207472142074772+intron-Distal3.923783.42844K562KHSRP
chr44206187742061997+intron-Distal3.264033.90146K562KHSRP
chr44206434642064441+intron-Distal3.566963.64762HepG2QKI
chr44200498142005048+intron-Distal5.000066.12104HepG2QKI
chr44206868142068747+intron-Distal,intron-Proximal3.199063.31830K562KHSRP
chr44205152942051618+intron-Distal,intron-Proximal3.575785.32884K562KHSRP
chr44202515742025233+intron-Distal,intron-Proximal3.696293.25538K562KHSRP
chr44208071642080891+intron-Distal4.094238.41610K562KHSRP
chr44206740742067492+intron-Distal,intron-Proximal3.111325.83938K562KHSRP
chr44206724342067297+intron-Proximal3.021323.29251K562KHSRP
chr44206848742068544+intron-Proximal3.290804.72639K562KHSRP
chr44206514242065197+intron-Proximal3.603315.83621K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC30A9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC30A9 is not available on ENCORE database.

  • 92 RBPs can affect the levels of SLC30A9.  








The Knockdown/knockout RNA-Seq assay for SLC30A9 is not available on ENCORE database.





92 RBPs can affect the gene expression of SLC30A9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC30A9ENSG00000014824.92458.577401733.847200.503704.167403.53280HepG2AKAP1
SLC30A9ENSG00000014824.9848.026801155.35030-0.446102.578901.67630HepG2BCCIP
SLC30A9ENSG00000014824.91259.849601003.966300.327402.107301.31860HepG2BCLAF1
SLC30A9ENSG00000014824.9913.19840569.860400.680204.077003.14110HepG2CNOT7
SLC30A9ENSG00000014824.91074.477001357.44910-0.337302.598901.52670HepG2CPSF7
SLC30A9ENSG00000014824.92439.410401661.000700.554405.664304.79880HepG2DDX3X
SLC30A9ENSG00000014824.9753.192101135.91950-0.592804.273703.33420HepG2DDX55
SLC30A9ENSG00000014824.9982.341201426.58370-0.538304.139303.39530HepG2DDX6
SLC30A9ENSG00000014824.91026.931401379.84570-0.426204.299603.25970HepG2EWSR1
SLC30A9ENSG00000014824.9764.528201664.30590-1.1223015.9995014.40700HepG2FIP1L1
SLC30A9ENSG00000014824.91221.67030945.519800.369602.617001.37900HepG2FKBP4
SLC30A9ENSG00000014824.91298.080201633.79610-0.331804.557403.40780HepG2HNRNPA2B1
SLC30A9ENSG00000014824.9723.22430493.590500.551003.271301.61210HepG2HNRNPD
SLC30A9ENSG00000014824.91252.890001573.59840-0.328802.744902.02990HepG2HNRNPF
SLC30A9ENSG00000014824.9951.194601436.14600-0.594405.770704.79060HepG2HNRNPK
SLC30A9ENSG00000014824.9907.220301250.02050-0.462407.001606.07360HepG2HNRNPU
SLC30A9ENSG00000014824.9835.211601290.76650-0.628008.719406.99800HepG2KIF1C
SLC30A9ENSG00000014824.9717.964301042.91950-0.538602.302001.31600HepG2NONO
SLC30A9ENSG00000014824.9345.61210520.75980-0.591502.628401.76750HepG2PABPC1
SLC30A9ENSG00000014824.9870.154801068.47110-0.296202.772001.99810HepG2PRPF4
SLC30A9ENSG00000014824.91256.758101785.02900-0.506207.565206.48060HepG2PUM2
SLC30A9ENSG00000014824.91047.031101438.12330-0.457904.872704.09660HepG2PUS1
SLC30A9ENSG00000014824.91841.348601517.478700.279002.709702.09100HepG2QKI
SLC30A9ENSG00000014824.91833.374801559.350600.233502.408501.89780HepG2NELFE
SLC30A9ENSG00000014824.91039.76110571.942000.862207.610206.30100HepG2RPS3A
SLC30A9ENSG00000014824.91196.184501761.25060-0.558203.935803.12520HepG2SF3A3
SLC30A9ENSG00000014824.92317.027901522.651900.6056015.1064014.19050HepG2SRSF1
SLC30A9ENSG00000014824.91118.218001651.85060-0.562904.389403.10220HepG2SRSF3
SLC30A9ENSG00000014824.92412.089001893.380400.349204.341303.72880HepG2SSB
SLC30A9ENSG00000014824.91460.726101054.674300.469803.072701.67130HepG2SUGP2
SLC30A9ENSG00000014824.91752.030801368.628700.356204.212903.54300HepG2TAF15
SLC30A9ENSG00000014824.91036.684301511.67920-0.544205.732204.74410HepG2TARDBP
SLC30A9ENSG00000014824.91454.126701214.747700.259402.142701.69190HepG2TIAL1
SLC30A9ENSG00000014824.9999.641501423.76850-0.510205.040504.20690HepG2U2AF1
SLC30A9ENSG00000014824.9771.441901479.91480-0.939902.816101.81730HepG2U2AF2
SLC30A9ENSG00000014824.91279.897801605.48760-0.327004.029202.79180HepG2UTP18
SLC30A9ENSG00000014824.91040.166701508.01200-0.535809.444608.44550HepG2UTP3
SLC30A9ENSG00000014824.92126.849902899.89070-0.447309.420508.45260K562AGGF1
SLC30A9ENSG00000014824.92178.424003017.40440-0.470005.676304.72170K562AKAP8L
SLC30A9ENSG00000014824.91581.792303358.25410-1.0862024.4371022.88290K562AQR
SLC30A9ENSG00000014824.91268.924602012.76820-0.665608.387706.82400K562BOP1
SLC30A9ENSG00000014824.9589.02660872.67980-0.567105.267603.70710K562CCAR1
SLC30A9ENSG00000014824.92896.592403465.73410-0.258802.846201.64950K562CCDC124
SLC30A9ENSG00000014824.92345.479003293.58700-0.489809.660207.59400K562CPEB4
SLC30A9ENSG00000014824.91221.453302140.15620-0.8091012.4583010.78420K562CPSF6
SLC30A9ENSG00000014824.91086.280701418.57970-0.385104.432603.05550K562CSTF2
SLC30A9ENSG00000014824.91575.457001959.62490-0.314803.964202.49710K562DDX21
SLC30A9ENSG00000014824.91301.873801639.72370-0.332904.210102.56000K562DDX27
SLC30A9ENSG00000014824.91170.743601525.34170-0.381703.796502.55060K562DDX3X
SLC30A9ENSG00000014824.92966.490603407.91150-0.200102.370301.75980K562DDX47
SLC30A9ENSG00000014824.91196.300601546.48550-0.370403.552102.02060K562DDX6
SLC30A9ENSG00000014824.9845.384901603.89880-0.9239014.0470011.82410K562EFTUD2
SLC30A9ENSG00000014824.92023.602802331.12260-0.204101.949101.32700K562EIF2S2
SLC30A9ENSG00000014824.91106.529201717.38060-0.634205.709704.15290K562EIF3D
SLC30A9ENSG00000014824.91475.583001913.81770-0.375203.501602.61230K562EIF3G
SLC30A9ENSG00000014824.91260.563901593.59080-0.338202.812001.98400K562EIF4A3
SLC30A9ENSG00000014824.91084.580001435.10080-0.404004.939103.33010K562EIF4B
SLC30A9ENSG00000014824.94609.594703991.428600.207602.593901.68140K562EIF4G2
SLC30A9ENSG00000014824.9920.712201391.03300-0.595308.701906.17080K562EWSR1
SLC30A9ENSG00000014824.91628.174002435.09380-0.580707.604906.13190K562FIP1L1
SLC30A9ENSG00000014824.91317.636002177.54640-0.7248010.265808.56270K562FMR1
SLC30A9ENSG00000014824.92514.962801682.846700.579504.737603.75570K562G3BP2
SLC30A9ENSG00000014824.91216.100901608.00660-0.403002.992801.50620K562GEMIN5
SLC30A9ENSG00000014824.91341.352502043.32730-0.607208.401807.01050K562GPKOW
SLC30A9ENSG00000014824.92281.094703106.62830-0.445605.582404.50500K562GRSF1
SLC30A9ENSG00000014824.91297.265701814.13590-0.483803.637202.96470K562HNRNPC
SLC30A9ENSG00000014824.91734.975602389.22830-0.461607.461205.99690K562HNRNPU
SLC30A9ENSG00000014824.91704.716402196.38440-0.365602.442201.49640K562IGF2BP2
SLC30A9ENSG00000014824.92520.221903202.44210-0.345604.067703.04040K562KIF1C
SLC30A9ENSG00000014824.91074.062201755.79240-0.709006.637904.35370K562LARP7
SLC30A9ENSG00000014824.91662.536802308.88180-0.473805.991604.73710K562MAGOH
SLC30A9ENSG00000014824.91272.525501994.51340-0.648309.613007.91120K562METAP2
SLC30A9ENSG00000014824.91798.472402284.05950-0.344805.792004.65170K562MTPAP
SLC30A9ENSG00000014824.91302.015401591.31640-0.289502.592501.40200K562NCBP2
SLC30A9ENSG00000014824.91798.954902537.76810-0.4964015.3344013.77020K562NSUN2
SLC30A9ENSG00000014824.91415.912702054.43680-0.537006.723905.17880K562PCBP2
SLC30A9ENSG00000014824.92282.527001574.410000.535703.569902.62470K562PCBP3
SLC30A9ENSG00000014824.91764.613801207.646000.547106.479605.26080K562POLR2G
SLC30A9ENSG00000014824.92214.745602764.24350-0.319702.705701.89580K562PPIG
SLC30A9ENSG00000014824.91195.663301560.77590-0.384502.968202.19260K562PRPF8
SLC30A9ENSG00000014824.91100.472601626.47280-0.563603.761802.68440K562PSIP1
SLC30A9ENSG00000014824.91303.177302243.18080-0.7835015.6281014.11610K562PTBP1
SLC30A9ENSG00000014824.91355.595502992.89020-1.1426025.1017023.47280K562PUS1
SLC30A9ENSG00000014824.92162.519702915.74520-0.431205.386904.58490K562RBM15
SLC30A9ENSG00000014824.92327.589302945.75590-0.339803.564401.73030K562RBM17
SLC30A9ENSG00000014824.91226.234202151.25290-0.8109013.5867011.52930K562RBM22
SLC30A9ENSG00000014824.91272.303901597.04110-0.328002.769001.43920K562RBM25
SLC30A9ENSG00000014824.91200.995701974.35100-0.717103.029701.75050K562SF1
SLC30A9ENSG00000014824.91736.026302504.16980-0.5285010.744909.20950K562SF3A3
SLC30A9ENSG00000014824.91144.405601943.25920-0.763909.039207.20720K562SF3B1
SLC30A9ENSG00000014824.91039.307701750.67210-0.7523014.2497012.19990K562SF3B4
SLC30A9ENSG00000014824.91287.348202267.49310-0.816704.091102.49300K562SNRNP200
SLC30A9ENSG00000014824.9852.406101406.37420-0.722406.633904.84280K562SRFBP1
SLC30A9ENSG00000014824.92162.769502565.57960-0.246403.704602.64030K562SRPK2
SLC30A9ENSG00000014824.91818.557402199.00130-0.274102.417101.74830K562SRSF1
SLC30A9ENSG00000014824.91692.405002076.63320-0.295202.298801.35730K562SRSF5
SLC30A9ENSG00000014824.91406.057401748.76500-0.314703.775102.39780K562SRSF7
SLC30A9ENSG00000014824.9933.216201511.28610-0.695507.177205.48620K562SUPV3L1
SLC30A9ENSG00000014824.91453.719801211.273000.263102.195901.46350K562SYNCRIP
SLC30A9ENSG00000014824.91655.567802225.67020-0.426903.998503.14060K562TARDBP
SLC30A9ENSG00000014824.91093.161501564.44740-0.517103.042102.05590K562TIAL1
SLC30A9ENSG00000014824.91248.734501661.53860-0.412102.565001.66070K562TRIM56
SLC30A9ENSG00000014824.91187.485501632.13350-0.458803.521602.25460K562U2AF1
SLC30A9ENSG00000014824.92883.992303979.38380-0.464506.332604.37590K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC30A9 is not available on ENCORE database.





3 RBPs can affect the splicing of SLC30A9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC30A9ENSG00000014824.9chr4+420776734207780342072542420727084208022842080868-0.068000.000040.00136excludedK562U2AF2
SESLC30A9ENSG00000014824.9chr4+4202040542020522420201274202018742022432420225320.077000.000220.08378includedK562NCBP2
SESLC30A9ENSG00000014824.9chr4+420725424207270842069066420692094207767342077803-0.066000.000760.01529excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC30A9 is not avaliable on ENCORE database.