KLHL13

General Information

Gene Name       : KLHL13
Gene ID             : ENSG00000003096.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KLHL13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KLHL13ENSG00000003096.149.5910.5310.06ENCSR000AEF
HepG2KLHL13ENSG00000003096.140.210.380.29ENCSR985KAT
K562KLHL13ENSG00000003096.141.561.801.68ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KLHL13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KLHL13 RNA is bound by 2 proteins.  







eCLIP assay for KLHL13 is not avaliable on ENCORE database.





2 proteins are bound to KLHL13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX117223517117223578-intron-Distal4.796764.67693K562PTBP1
chrX117048268117048298-intron-Distal5.3056763.02849K562TROVE2
chrX117048265117048318-intron-Distal5.894235.92183HepG2TROVE2
chrX117233758117233815-intron-Distal4.856085.39854K562PTBP1
chrX117048298117048320-intron-Distal5.2948262.63477K562TROVE2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KLHL13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KLHL13 is not available on ENCORE database.

  • 36 RBPs can affect the levels of KLHL13.  








The Knockdown/knockout RNA-Seq assay for KLHL13 is not available on ENCORE database.





36 RBPs can affect the gene expression of KLHL13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KLHL13ENSG00000003096.951.1296013.775701.891903.701602.61820HepG2ABCF1
KLHL13ENSG00000003096.954.6223014.218801.941605.314404.28490HepG2AKAP8L
KLHL13ENSG00000003096.932.5570010.465601.637202.250201.56530HepG2CNOT7
KLHL13ENSG00000003096.927.122207.076801.938202.134601.32510HepG2EEF2
KLHL13ENSG00000003096.96.2432024.46740-1.970502.270901.72930HepG2EIF2S1
KLHL13ENSG00000003096.9100.423409.599003.3870014.8617013.49450HepG2GPKOW
KLHL13ENSG00000003096.950.833309.920702.357205.396504.53630HepG2HNRNPA1
KLHL13ENSG00000003096.932.392209.160401.822102.631102.01480HepG2HNRNPLL
KLHL13ENSG00000003096.957.7662027.436101.074001.998901.45810HepG2MATR3
KLHL13ENSG00000003096.941.467608.497902.286704.086803.12860HepG2PRPF8
KLHL13ENSG00000003096.961.3677015.422601.992306.416405.55830HepG2PUF60
KLHL13ENSG00000003096.969.8183016.362102.093205.048604.15680HepG2PUM2
KLHL13ENSG00000003096.998.6399014.404102.7756014.3524013.14060HepG2PUS1
KLHL13ENSG00000003096.939.6794016.071801.303802.271901.64370HepG2RPLP0
KLHL13ENSG00000003096.933.8865010.501101.690102.619901.84200HepG2RPS3A
KLHL13ENSG00000003096.935.723206.407302.479003.061801.62030HepG2SF1
KLHL13ENSG00000003096.959.2458028.927001.034202.045901.62200HepG2SRSF1
KLHL13ENSG00000003096.985.2381023.149201.880407.757806.98410HepG2SSB
KLHL13ENSG00000003096.947.2742010.965502.108003.669402.90620HepG2SUPV3L1
KLHL13ENSG00000003096.942.8667010.652302.008604.321403.72490HepG2TIAL1
KLHL13ENSG00000003096.963.7559020.552101.633204.830803.48680HepG2UTP18
KLHL13ENSG00000003096.9125.34810199.49840-0.670402.998602.41100K562AGGF1
KLHL13ENSG00000003096.9309.50150216.473900.515702.314501.77040K562AQR
KLHL13ENSG00000003096.971.74740129.12950-0.847803.380802.59850K562EIF2S2
KLHL13ENSG00000003096.9293.17500122.872301.2545010.846709.19970K562EIF4A3
KLHL13ENSG00000003096.967.44080127.78070-0.922003.787203.09580K562FXR1
KLHL13ENSG00000003096.9193.8564092.798501.062705.687304.86200K562HNRNPC
KLHL13ENSG00000003096.9149.96410220.29540-0.554802.011201.31660K562KIF1C
KLHL13ENSG00000003096.9100.23200180.59040-0.849404.425503.23310K562MATR3
KLHL13ENSG00000003096.9386.04430262.951200.553903.412602.15770K562MSI2
KLHL13ENSG00000003096.961.21340122.70620-1.003303.990302.49620K562NCBP2
KLHL13ENSG00000003096.9367.55160253.477600.536002.957301.46950K562PNPT1
KLHL13ENSG00000003096.9289.94040175.795000.721804.971304.10510K562PTBP1
KLHL13ENSG00000003096.9367.11660269.160400.447702.168401.44780K562PUF60
KLHL13ENSG00000003096.9112.89590200.58860-0.829204.161703.45100K562RBM15
KLHL13ENSG00000003096.998.47930172.32940-0.807303.532202.74050K562SRSF1
KLHL13ENSG00000003096.9180.9410095.980700.914604.147902.88310K562SUPV3L1
KLHL13ENSG00000003096.9111.23780168.24940-0.597002.290601.55270K562TIA1
KLHL13ENSG00000003096.988.82240165.06030-0.894003.923202.58880K562TRA2A
KLHL13ENSG00000003096.9338.95500243.838400.475102.618401.78360K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KLHL13 is not available on ENCORE database.






No RBPs affect the alternative splcing events of KLHL13 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for KLHL13 is not avaliable on ENCORE database.