NTN1

General Information

Gene Name       : NTN1
Gene ID             : ENSG00000065320.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NTN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NTN1ENSG00000065320.80.010.120.07ENCSR000AEF
HepG2NTN1ENSG00000065320.80.070.030.05ENCSR985KAT
K562NTN1ENSG00000065320.80.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NTN1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on NTN1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for NTN1 is not avaliable on ENCORE database.






NO known proteins are bound to NTN1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for NTN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NTN1 is not available on ENCORE database.

  • 27 RBPs can affect the levels of NTN1.  








The Knockdown/knockout RNA-Seq assay for NTN1 is not available on ENCORE database.





27 RBPs can affect the gene expression of NTN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NTN1ENSG00000065320.426.216801.843303.830005.670304.31200HepG2ADAR
NTN1ENSG00000065320.444.752104.408903.343407.261606.01870HepG2ASCC1
NTN1ENSG00000065320.429.082905.026102.532603.867502.42180HepG2BUD13
NTN1ENSG00000065320.450.566208.398502.589905.909904.45940HepG2CCAR1
NTN1ENSG00000065320.432.027604.411802.859804.505203.26820HepG2DDX59
NTN1ENSG00000065320.421.269701.857003.517604.367803.50090HepG2DNAJC21
NTN1ENSG00000065320.433.546104.359302.943905.159504.26310HepG2G3BP1
NTN1ENSG00000065320.486.253302.071005.3801022.9584021.34430HepG2HNRNPU
NTN1ENSG00000065320.456.616304.428803.676109.928708.73510HepG2IGF2BP2
NTN1ENSG00000065320.420.176403.313002.606402.932101.69790HepG2KHDRBS1
NTN1ENSG00000065320.4109.577804.732604.5331019.9423018.37540HepG2MATR3
NTN1ENSG00000065320.431.096706.522902.253104.315203.36250HepG2NOL12
NTN1ENSG00000065320.424.900605.925702.071002.904701.83910HepG2PCBP2
NTN1ENSG00000065320.440.887606.226602.715105.638603.94910HepG2PRPF6
NTN1ENSG00000065320.417.286202.378802.861202.224401.49700HepG2PRPF8
NTN1ENSG00000065320.440.210706.228902.690406.221105.37490HepG2PUF60
NTN1ENSG00000065320.477.198106.608403.5461014.8935013.41540HepG2PUM2
NTN1ENSG00000065320.422.457405.709501.975701.910301.31320HepG2RAVER1
NTN1ENSG00000065320.425.264506.510601.956202.492601.67460HepG2RBM15
NTN1ENSG00000065320.428.656805.322102.428703.183102.61090HepG2NELFE
NTN1ENSG00000065320.424.262506.782801.838702.601101.93640HepG2RPLP0
NTN1ENSG00000065320.423.556804.932802.255602.624602.02490HepG2RPS19
NTN1ENSG00000065320.40.9485014.38050-3.922403.271102.74060HepG2SRFBP1
NTN1ENSG00000065320.429.969706.153302.284004.209103.46600HepG2SRSF5
NTN1ENSG00000065320.421.325804.227302.334702.895002.33340HepG2SRSF9
NTN1ENSG00000065320.467.581303.073604.4585010.519909.34130HepG2SUPV3L1
NTN1ENSG00000065320.491.227802.014905.5006023.4833022.29330HepG2TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NTN1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NTN1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NTN1 is not avaliable on ENCORE database.