TNFRSF1A

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TNFRSF1A	ENSG00000067182.7	4.06	10.07	7.06	ENCSR000AEF
HepG2	TNFRSF1A	ENSG00000067182.7	65.43	52.45	58.94	ENCSR985KAT
K562	TNFRSF1A	ENSG00000067182.7	41.70	25.68	33.69	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TNFRSF1A is not avaliable on ENCORE database.

Proteins bound to RNA

TNFRSF1A RNA is bound by 26 proteins.

eCLIP assay for TNFRSF1A is not avaliable on ENCORE database.

26 proteins are bound to TNFRSF1A RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	6438361	6438415	-	3'-UTR,intron-Distal,intron-Proximal	4.46967	5.07324	HepG2	TIA1
chr12	6438265	6438344	-	3'-UTR,intron-Distal,intron-Proximal	4.43982	8.55060	HepG2	UPF1
chr12	6439066	6439198	-	3'-UTR,CDS,intron-Distal	3.91067	6.10902	HepG2	PCBP1
chr12	6438297	6438360	-	3'-UTR,intron-Distal,intron-Proximal	5.14684	13.17306	K562	PUM2
chr12	6438007	6438100	-	3'-UTR,intron-Distal	3.73736	4.49490	HepG2	TIAL1
chr12	6438979	6439182	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.01077	9.15108	HepG2	LARP4
chr12	6437951	6438011	-	3'-UTR,intron-Distal	4.50111	9.89562	K562	PUM2
chr12	6438037	6438099	-	3'-UTR,intron-Distal	3.35177	27.10948	HepG2	DDX55
chr12	6438478	6438534	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.11990	3.15006	K562	RBM15
chr12	6440018	6440091	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.70587	6.98305	HepG2	PPIG
chr12	6439425	6439463	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.12692	5.24235	HepG2	EFTUD2
chr12	6438484	6438553	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.09473	7.18138	HepG2	RBM15
chr12	6438038	6438104	-	3'-UTR,intron-Distal	3.57324	6.24912	HepG2	UPF1
chr12	6438037	6438100	-	3'-UTR,intron-Distal	3.25515	5.13651	HepG2	AKAP1
chr12	6439044	6439148	-	3'-UTR,CDS,intron-Distal	4.24835	23.78891	HepG2	PCBP2
chr12	6442300	6442406	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22416	8.45115	HepG2	SF3B4
chr12	6438950	6439038	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.59626	12.89884	HepG2	PCBP2
chr12	6442309	6442341	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.88723	3.39008	HepG2	AQR
chr12	6442195	6442241	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.13463	10.95071	HepG2	PRPF8
chr12	6442470	6442574	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67131	6.32386	HepG2	AQR
chr12	6438963	6439036	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.01797	3.73561	HepG2	IGF2BP3
chr12	6442612	6442672	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.98523	6.16445	HepG2	PPIG
chr12	6438764	6438843	-	3'-UTR,CDS,intron-Distal	4.39001	3.93614	HepG2	AQR
chr12	6442480	6442552	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.05309	13.02788	HepG2	PRPF8
chr12	6438181	6438244	-	3'-UTR,intron-Distal,intron-Proximal	3.05100	5.39571	HepG2	LARP4
chr12	6450938	6451009	-	5'-UTR,CDS,intron-Distal	3.20347	8.87436	HepG2	DDX3X
chr12	6451015	6451105	-	5'-UTR,intron-Distal,intron-Proximal	4.11899	9.04754	HepG2	RPS3
chr12	6450937	6450997	-	5'-UTR,CDS,intron-Distal	4.38317	9.17911	HepG2	RPS3
chr12	6451045	6451171	-	5'-UTR,intron-Distal,intron-Proximal	3.69748	15.61647	HepG2	DDX3X
chr12	6442902	6442944	-	CDS,intron-Distal,intron-Proximal	3.10778	4.51003	HepG2	PPIG
chr12	6439692	6439755	-	CDS,intron-Distal,intron-Proximal	3.54529	6.25527	HepG2	PRPF8
chr12	6442333	6442421	-	CDS,intron-Distal,intron-Proximal	3.61350	5.34579	HepG2	HNRNPK
chr12	6443323	6443376	-	CDS,intron-Distal	4.04384	10.03874	HepG2	DDX3X
chr12	6450919	6450954	-	CDS,intron-Distal	3.68782	8.43093	HepG2	PRPF8
chr12	6442352	6442413	-	CDS,intron-Distal,intron-Proximal	3.94171	5.00478	HepG2	PCBP2
chr12	6442421	6442512	-	CDS,intron-Distal,intron-Proximal	3.44719	4.16645	HepG2	HNRNPK
chr12	6442430	6442497	-	CDS,intron-Distal,intron-Proximal	5.16449	6.57498	HepG2	PCBP2
chr12	6439614	6439721	-	CDS,intron-Distal,intron-Proximal	6.68118	12.57895	HepG2	EFTUD2
chr12	6439633	6439731	-	CDS,intron-Distal,intron-Proximal	4.07387	3.84437	HepG2	PRPF4
chr12	6439648	6439717	-	CDS,intron-Distal,intron-Proximal	3.76338	3.01994	HepG2	GTF2F1
chr12	6443376	6443412	-	CDS,intron-Distal,intron-Proximal	3.47878	8.13782	HepG2	DDX3X
chr12	6450922	6450943	-	CDS,intron-Distal	5.31015	6.03362	HepG2	AQR
chr12	6446766	6446802	-	intron-Distal	3.50511	3.69530	HepG2	CSTF2T
chr12	6446285	6446360	-	intron-Distal	4.19360	11.74221	HepG2	CSTF2T
chr12	6445623	6445718	-	intron-Distal	6.13605	35.62791	HepG2	RBFOX2
chr12	6446466	6446527	-	intron-Distal	4.19783	6.48652	HepG2	CSTF2T
chr12	6450810	6450926	-	intron-Distal	3.22970	3.39064	HepG2	RBM22
chr12	6445929	6445993	-	intron-Distal	3.34675	10.17655	HepG2	RBFOX2
chr12	6445496	6445560	-	intron-Distal	3.18013	5.84333	HepG2	RBFOX2
chr12	6445867	6445959	-	intron-Distal	4.87566	7.09127	HepG2	PRPF4
chr12	6443877	6443906	-	intron-Distal	3.64699	6.58530	HepG2	XPO5
chr12	6450140	6450188	-	intron-Distal	3.87200	4.60998	HepG2	PCBP2
chr12	6447284	6447340	-	intron-Distal	3.99031	5.56645	HepG2	CSTF2T
chr12	6445938	6445966	-	intron-Distal	4.34603	4.10564	HepG2	CSTF2T
chr12	6443906	6443921	-	intron-Distal	4.22082	5.07081	HepG2	XPO5
chr12	6450904	6450919	-	intron-Distal	3.57058	6.82513	HepG2	PRPF8
chr12	6445642	6445695	-	intron-Distal	4.24541	8.40143	HepG2	CSTF2T
chr12	6450893	6450904	-	intron-Distal	3.35009	5.50267	HepG2	PRPF8
chr12	6449609	6449673	-	intron-Distal	4.09312	6.43614	HepG2	PCBP2
chr12	6450900	6450922	-	intron-Distal	5.43895	6.74224	HepG2	AQR
chr12	6450311	6450415	-	intron-Distal	3.49270	5.25366	HepG2	FAM120A
chr12	6450315	6450405	-	intron-Distal	4.92912	8.29787	HepG2	PRPF4
chr12	6450333	6450416	-	intron-Distal	4.67941	6.13530	HepG2	GTF2F1
chr12	6442112	6442219	-	intron-Distal,intron-Proximal	6.11205	23.94880	HepG2	EFTUD2
chr12	6445491	6445568	-	intron-Distal	3.68536	9.05327	HepG2	CSTF2T
chr12	6447413	6447474	-	intron-Distal	3.76106	6.28777	HepG2	CSTF2T
chr12	6450548	6450628	-	intron-Distal	3.48658	3.15890	HepG2	GTF2F1
chr12	6449824	6449899	-	intron-Distal	3.66177	6.19545	HepG2	PCBP2
chr12	6450622	6450667	-	intron-Distal	4.34416	4.57620	HepG2	PRPF4
chr12	6440099	6440141	-	intron-Distal,intron-Proximal	4.63276	4.50924	HepG2	SF3B4
chr12	6445860	6445915	-	intron-Distal	3.46276	7.70097	HepG2	CSTF2T
chr12	6445633	6445683	-	intron-Distal	4.19264	3.58513	HepG2	GTF2F1
chr12	6439881	6439933	-	intron-Distal,intron-Proximal	3.17482	5.37254	HepG2	SF3B4
chr12	6449121	6449226	-	intron-Distal	3.03546	10.39068	HepG2	CSTF2T
chr12	6445846	6445916	-	intron-Distal	4.05362	14.39059	HepG2	RBFOX2
chr12	6445609	6445688	-	intron-Distal	3.39152	4.13948	HepG2	PRPF4
chr12	6446430	6446466	-	intron-Distal	3.62527	4.37279	HepG2	CSTF2T
chr12	6442147	6442206	-	intron-Distal,intron-Proximal	4.40245	5.39582	HepG2	RBM22
chr12	6450804	6450855	-	intron-Distal	4.35663	5.29549	HepG2	EFTUD2
chr12	6445746	6445846	-	intron-Distal	4.62430	18.54863	HepG2	RBFOX2
chr12	6450862	6450921	-	intron-Distal	5.49540	7.66714	HepG2	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TNFRSF1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TNFRSF1A is not available on ENCORE database.
126 RBPs can affect the levels of TNFRSF1A.

The Knockdown/knockout RNA-Seq assay for TNFRSF1A is not available on ENCORE database.

126 RBPs can affect the gene expression of TNFRSF1A :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TNFRSF1A	ENSG00000067182.3	1427.89440	2291.36310	-0.68230	8.21490	6.71430	HepG2	ABCF1
TNFRSF1A	ENSG00000067182.3	2583.98920	1446.44540	0.83700	31.33550	29.81860	HepG2	ACO1
TNFRSF1A	ENSG00000067182.3	657.82220	1134.36710	-0.78610	9.55110	7.84880	HepG2	ADAR
TNFRSF1A	ENSG00000067182.3	2988.22060	1812.63070	0.72110	7.89960	7.05140	HepG2	AKAP1
TNFRSF1A	ENSG00000067182.3	2597.99060	2015.25440	0.36630	2.48120	1.49330	HepG2	AKAP8
TNFRSF1A	ENSG00000067182.3	2468.30810	1499.71380	0.71870	9.17800	7.80420	HepG2	ASCC1
TNFRSF1A	ENSG00000067182.3	2554.64990	1940.61990	0.39650	7.48730	6.44770	HepG2	AUH
TNFRSF1A	ENSG00000067182.3	2131.46570	1502.72590	0.50420	5.79780	4.96980	HepG2	BOP1
TNFRSF1A	ENSG00000067182.3	2277.95080	1716.42390	0.40820	4.11690	2.62750	HepG2	BUD13
TNFRSF1A	ENSG00000067182.3	1230.44680	1446.03710	-0.23290	2.68300	2.02540	HepG2	CKAP4
TNFRSF1A	ENSG00000067182.3	2795.91800	1886.58840	0.56740	8.12890	6.32970	HepG2	CPSF7
TNFRSF1A	ENSG00000067182.3	529.36580	686.62820	-0.37530	2.57950	1.53670	HepG2	CSTF2
TNFRSF1A	ENSG00000067182.3	2197.42520	1493.14060	0.55740	11.51580	10.37980	HepG2	CELF1
TNFRSF1A	ENSG00000067182.3	2107.03390	1605.39330	0.39220	8.11120	6.94320	HepG2	DAZAP1
TNFRSF1A	ENSG00000067182.3	844.84880	1337.71150	-0.66300	15.47420	13.85900	HepG2	DDX19B
TNFRSF1A	ENSG00000067182.3	696.86910	1009.12920	-0.53420	5.10050	4.20830	HepG2	DDX21
TNFRSF1A	ENSG00000067182.3	658.04060	988.17040	-0.58660	5.07820	3.83310	HepG2	DDX24
TNFRSF1A	ENSG00000067182.3	753.84650	1022.70910	-0.44010	2.76480	1.47520	HepG2	DDX27
TNFRSF1A	ENSG00000067182.3	1349.71630	1802.57100	-0.41740	3.05210	1.99710	HepG2	DDX5
TNFRSF1A	ENSG00000067182.3	4063.14320	1491.84780	1.44540	30.02590	28.31950	HepG2	DDX6
TNFRSF1A	ENSG00000067182.3	910.94360	1383.83200	-0.60320	10.97640	9.81220	HepG2	DKC1
TNFRSF1A	ENSG00000067182.3	1648.95990	1142.23320	0.52960	8.83160	7.62840	HepG2	DNAJC21
TNFRSF1A	ENSG00000067182.3	1431.51880	1014.67950	0.49640	4.22600	3.12570	HepG2	EIF3D
TNFRSF1A	ENSG00000067182.3	599.41100	953.39970	-0.66950	8.28670	6.61040	HepG2	EIF3G
TNFRSF1A	ENSG00000067182.3	1067.37950	1584.21860	-0.56970	4.91780	4.06910	HepG2	EIF4A3
TNFRSF1A	ENSG00000067182.3	1890.48140	1517.26400	0.31720	2.52190	1.74280	HepG2	EIF4G2
TNFRSF1A	ENSG00000067182.3	1115.46550	1984.64460	-0.83120	13.80610	11.68440	HepG2	ESF1
TNFRSF1A	ENSG00000067182.3	559.93810	909.81790	-0.70030	6.65690	4.78800	HepG2	FKBP4
TNFRSF1A	ENSG00000067182.3	1105.66280	1574.84260	-0.51030	4.69870	3.52440	HepG2	G3BP2
TNFRSF1A	ENSG00000067182.3	686.28620	903.44260	-0.39660	2.51100	1.66220	HepG2	GEMIN5
TNFRSF1A	ENSG00000067182.3	1599.31230	1084.02850	0.56090	4.89320	3.53700	HepG2	GNB2L1
TNFRSF1A	ENSG00000067182.3	1783.00270	1380.88430	0.36860	5.53780	4.20510	HepG2	HDGF
TNFRSF1A	ENSG00000067182.3	1641.74000	1124.18880	0.54620	3.34950	1.83720	HepG2	HNRNPA0
TNFRSF1A	ENSG00000067182.3	544.75010	1153.17660	-1.08190	17.80280	16.39620	HepG2	HNRNPA1
TNFRSF1A	ENSG00000067182.3	770.91930	1282.71060	-0.73450	9.49520	8.27380	HepG2	HNRNPC
TNFRSF1A	ENSG00000067182.3	1733.45020	1462.36020	0.24520	1.92770	1.35260	HepG2	HNRNPL
TNFRSF1A	ENSG00000067182.3	1055.42530	1492.38420	-0.49980	4.58860	3.79830	HepG2	HNRNPLL
TNFRSF1A	ENSG00000067182.3	1488.61300	1301.58020	0.19360	2.30830	1.63160	HepG2	ILF2
TNFRSF1A	ENSG00000067182.3	851.34000	1115.03290	-0.38930	3.41180	2.05900	HepG2	LIN28B
TNFRSF1A	ENSG00000067182.3	1225.01310	1608.45260	-0.39290	2.66020	2.04140	HepG2	MATR3
TNFRSF1A	ENSG00000067182.3	1111.01260	1646.25720	-0.56730	5.24500	4.38600	HepG2	NCBP2
TNFRSF1A	ENSG00000067182.3	1921.67550	1591.91000	0.27150	2.77080	2.00610	HepG2	NOL12
TNFRSF1A	ENSG00000067182.3	892.56760	1323.30830	-0.56810	5.67550	4.62470	HepG2	NSUN2
TNFRSF1A	ENSG00000067182.3	1751.00910	1214.35970	0.52790	2.70560	1.82860	HepG2	PABPC1
TNFRSF1A	ENSG00000067182.3	1668.35090	1261.25000	0.40350	6.09880	4.91940	HepG2	PARN
TNFRSF1A	ENSG00000067182.3	1750.27230	1191.39170	0.55480	3.19050	1.55640	HepG2	PNPT1
TNFRSF1A	ENSG00000067182.3	724.58060	1580.70750	-1.12540	36.34570	34.20620	HepG2	PRPF4
TNFRSF1A	ENSG00000067182.3	761.81070	1152.70330	-0.59750	3.63940	2.25360	HepG2	PRPF6
TNFRSF1A	ENSG00000067182.3	1084.04470	1519.64500	-0.48730	5.26650	4.47680	HepG2	PUF60
TNFRSF1A	ENSG00000067182.3	2000.79050	1613.20240	0.31050	5.64020	4.85570	HepG2	PUM1
TNFRSF1A	ENSG00000067182.3	2029.41470	1612.00410	0.33210	3.71200	2.94070	HepG2	PUM2
TNFRSF1A	ENSG00000067182.3	1042.04460	1473.28470	-0.49960	9.26480	8.24860	HepG2	PUS1
TNFRSF1A	ENSG00000067182.3	1216.02760	1873.84360	-0.62380	10.90470	9.78320	HepG2	QKI
TNFRSF1A	ENSG00000067182.3	3020.92130	2116.08110	0.51350	8.76510	7.35250	HepG2	RBM15
TNFRSF1A	ENSG00000067182.3	1561.25630	1862.21340	-0.25430	2.36420	1.87530	HepG2	RBM22
TNFRSF1A	ENSG00000067182.3	1031.04310	1280.96870	-0.31310	2.42270	1.50100	HepG2	RBM27
TNFRSF1A	ENSG00000067182.3	1124.34180	1925.59030	-0.77620	19.76590	18.57540	HepG2	NELFE
TNFRSF1A	ENSG00000067182.3	1088.84160	1793.48070	-0.72000	17.30050	15.97520	HepG2	RECQL
TNFRSF1A	ENSG00000067182.3	1474.79910	1823.54850	-0.30620	2.54570	1.88630	HepG2	RPLP0
TNFRSF1A	ENSG00000067182.3	705.01490	1039.73410	-0.56050	3.22990	2.21020	HepG2	RPS10
TNFRSF1A	ENSG00000067182.3	968.61010	1181.31860	-0.28640	2.09200	1.39040	HepG2	RPS2
TNFRSF1A	ENSG00000067182.3	1157.92980	1457.16880	-0.33160	4.56810	3.70180	HepG2	SLBP
TNFRSF1A	ENSG00000067182.3	1707.66600	1080.15990	0.66070	5.37880	4.01200	HepG2	SMNDC1
TNFRSF1A	ENSG00000067182.3	2391.39920	2103.33600	0.18510	2.18810	1.72600	HepG2	SRFBP1
TNFRSF1A	ENSG00000067182.3	1093.31760	1880.26220	-0.78220	21.39100	20.33810	HepG2	SRSF1
TNFRSF1A	ENSG00000067182.3	1938.42650	1500.46670	0.36940	5.86020	4.99840	HepG2	SRSF5
TNFRSF1A	ENSG00000067182.3	2075.05810	1529.71650	0.43980	8.78500	7.89930	HepG2	SRSF9
TNFRSF1A	ENSG00000067182.3	996.98190	1826.25380	-0.87320	26.22140	25.00320	HepG2	SSB
TNFRSF1A	ENSG00000067182.3	1423.95980	988.76850	0.52610	2.97300	1.72370	HepG2	SUB1
TNFRSF1A	ENSG00000067182.3	2233.19860	1706.41090	0.38800	7.74630	6.79230	HepG2	SUCLG1
TNFRSF1A	ENSG00000067182.3	974.19460	1690.12720	-0.79480	17.50010	16.26360	HepG2	TAF15
TNFRSF1A	ENSG00000067182.3	1102.13400	1454.70140	-0.40040	3.36670	2.57620	HepG2	TARDBP
TNFRSF1A	ENSG00000067182.3	1251.18980	2147.43380	-0.77930	4.08110	2.80300	HepG2	TBRG4
TNFRSF1A	ENSG00000067182.3	1032.67090	729.30360	0.50170	2.97020	1.93850	HepG2	TFIP11
TNFRSF1A	ENSG00000067182.3	1818.61790	1249.22330	0.54170	11.31730	10.29070	HepG2	TRIM56
TNFRSF1A	ENSG00000067182.3	911.44590	1978.96230	-1.11850	21.74670	19.91890	HepG2	U2AF1
TNFRSF1A	ENSG00000067182.3	1952.68050	1544.36950	0.33830	5.27790	4.36260	HepG2	UPF1
TNFRSF1A	ENSG00000067182.3	1896.67500	1491.02980	0.34710	5.42760	4.63630	HepG2	UTP3
TNFRSF1A	ENSG00000067182.3	753.05820	1071.14760	-0.50830	4.31400	3.41430	HepG2	XRN2
TNFRSF1A	ENSG00000067182.3	1074.15210	1559.95000	-0.53830	11.43340	10.22630	HepG2	ZC3H8
TNFRSF1A	ENSG00000067182.3	3217.17210	1698.51240	0.92140	48.93830	47.37990	HepG2	ZNF622
TNFRSF1A	ENSG00000067182.3	125.17250	322.22230	-1.36410	7.02330	4.45280	K562	ADAR
TNFRSF1A	ENSG00000067182.3	499.49980	622.43390	-0.31740	2.24970	1.72950	K562	AGGF1
TNFRSF1A	ENSG00000067182.3	138.13700	217.82200	-0.65710	3.75090	1.96840	K562	AKAP1
TNFRSF1A	ENSG00000067182.3	397.37520	647.66560	-0.70470	6.72100	5.66930	K562	AKAP8L
TNFRSF1A	ENSG00000067182.3	233.09870	474.23540	-1.02470	6.63850	5.79310	K562	AQR
TNFRSF1A	ENSG00000067182.3	520.14690	679.54760	-0.38570	3.12580	2.15140	K562	ATP5C1
TNFRSF1A	ENSG00000067182.3	177.12650	337.27700	-0.92920	4.48550	2.06440	K562	CPSF7
TNFRSF1A	ENSG00000067182.3	306.73310	706.73390	-1.20420	12.49210	10.50200	K562	CELF1
TNFRSF1A	ENSG00000067182.3	203.49370	313.14980	-0.62190	3.94680	2.48370	K562	DDX21
TNFRSF1A	ENSG00000067182.3	299.70270	184.76040	0.69780	5.12300	3.31550	K562	DDX27
TNFRSF1A	ENSG00000067182.3	335.34610	197.26800	0.76540	4.72950	2.03440	K562	DDX28
TNFRSF1A	ENSG00000067182.3	362.20170	220.71060	0.71450	5.39720	3.87410	K562	DDX3X
TNFRSF1A	ENSG00000067182.3	117.93890	359.64660	-1.60850	11.80830	8.48730	K562	DNAJC2
TNFRSF1A	ENSG00000067182.3	344.22450	184.63950	0.89850	6.42670	4.98830	K562	EFTUD2
TNFRSF1A	ENSG00000067182.3	1154.40450	358.91850	1.68530	53.21330	50.89750	K562	EIF2S2
TNFRSF1A	ENSG00000067182.3	413.45430	197.66920	1.06450	4.29790	2.97170	K562	EIF3D
TNFRSF1A	ENSG00000067182.3	403.90740	230.58870	0.80860	4.70130	3.63280	K562	EIF4A3
TNFRSF1A	ENSG00000067182.3	342.78380	574.95410	-0.74610	5.33270	4.04940	K562	EIF4G2
TNFRSF1A	ENSG00000067182.3	247.61520	385.30220	-0.63790	3.23890	1.45570	K562	ESF1
TNFRSF1A	ENSG00000067182.3	292.14450	440.77120	-0.59330	4.46090	2.80550	K562	EXOSC5
TNFRSF1A	ENSG00000067182.3	377.08360	268.69930	0.48880	2.45140	1.40110	K562	FKBP4
TNFRSF1A	ENSG00000067182.3	90.64350	179.21940	-0.98350	5.52140	3.56450	K562	FUS
TNFRSF1A	ENSG00000067182.3	308.30070	185.11590	0.73580	4.11380	2.34820	K562	GEMIN5
TNFRSF1A	ENSG00000067182.3	225.56390	447.01030	-0.98680	11.27680	9.12720	K562	GLRX3
TNFRSF1A	ENSG00000067182.3	146.89990	374.16940	-1.34890	15.51700	13.28210	K562	HNRNPA1
TNFRSF1A	ENSG00000067182.3	251.86720	489.64920	-0.95910	4.46730	2.80480	K562	HNRNPA2B1
TNFRSF1A	ENSG00000067182.3	627.92360	298.05670	1.07490	11.29030	9.09260	K562	HNRNPM
TNFRSF1A	ENSG00000067182.3	285.20250	414.38290	-0.53900	3.94600	2.87370	K562	HNRNPU
TNFRSF1A	ENSG00000067182.3	1185.50310	491.28950	1.27080	23.07190	20.97500	K562	HSPD1
TNFRSF1A	ENSG00000067182.3	141.19890	329.59440	-1.22300	8.01450	5.55840	K562	ILF3
TNFRSF1A	ENSG00000067182.3	216.80170	318.60890	-0.55540	3.07290	1.51000	K562	KHDRBS1
TNFRSF1A	ENSG00000067182.3	382.05360	687.35280	-0.84730	9.32100	7.56900	K562	KIF1C
TNFRSF1A	ENSG00000067182.3	471.22310	299.69090	0.65280	4.95420	3.02250	K562	LARP7
TNFRSF1A	ENSG00000067182.3	529.57580	275.95000	0.94030	10.03070	7.09320	K562	LSM11
TNFRSF1A	ENSG00000067182.3	372.99030	612.87880	-0.71650	5.13740	3.60420	K562	MSI2
TNFRSF1A	ENSG00000067182.3	253.48470	469.97390	-0.89070	10.43080	8.96680	K562	MTPAP
TNFRSF1A	ENSG00000067182.3	310.13820	539.71710	-0.79930	5.16790	3.83110	K562	NAA15
TNFRSF1A	ENSG00000067182.3	347.09910	230.25590	0.59200	3.79090	2.33370	K562	NCBP2
TNFRSF1A	ENSG00000067182.3	273.75000	181.98800	0.58890	2.66920	1.40830	K562	NONO
TNFRSF1A	ENSG00000067182.3	224.53630	522.17840	-1.21760	20.30490	18.55400	K562	NSUN2
TNFRSF1A	ENSG00000067182.3	199.28000	560.65880	-1.49230	18.65520	16.57270	K562	PCBP3
TNFRSF1A	ENSG00000067182.3	167.69250	430.04050	-1.35870	16.62510	14.74600	K562	POLR2G
TNFRSF1A	ENSG00000067182.3	254.67740	477.17450	-0.90580	4.72580	2.31840	K562	PRPF6
TNFRSF1A	ENSG00000067182.3	643.95750	179.67610	1.84150	28.14040	25.75670	K562	PRPF8
TNFRSF1A	ENSG00000067182.3	527.82450	277.43620	0.92780	6.24860	4.80870	K562	PSIP1
TNFRSF1A	ENSG00000067182.3	710.53910	269.48510	1.39860	15.81010	14.29090	K562	PTBP1
TNFRSF1A	ENSG00000067182.3	407.90700	642.34280	-0.65510	4.89780	4.20150	K562	PUS1
TNFRSF1A	ENSG00000067182.3	395.25830	625.83630	-0.66300	6.91370	6.00420	K562	RBM15
TNFRSF1A	ENSG00000067182.3	279.08360	453.59840	-0.70070	3.90010	1.98220	K562	RBM17
TNFRSF1A	ENSG00000067182.3	502.17940	253.14860	0.98810	10.88110	8.89960	K562	RCC2
TNFRSF1A	ENSG00000067182.3	303.65510	183.00310	0.73050	3.84090	2.87550	K562	RPS19
TNFRSF1A	ENSG00000067182.3	321.72700	173.06240	0.89440	3.79110	2.59610	K562	RPS3
TNFRSF1A	ENSG00000067182.3	487.20500	353.97010	0.46080	2.35930	1.46650	K562	SF3B1
TNFRSF1A	ENSG00000067182.3	284.39620	142.64680	0.99540	7.56790	6.10710	K562	SF3B4
TNFRSF1A	ENSG00000067182.3	191.50810	347.55460	-0.85980	5.94430	4.08430	K562	SLBP
TNFRSF1A	ENSG00000067182.3	410.71370	239.97560	0.77510	4.59130	3.17650	K562	SRFBP1
TNFRSF1A	ENSG00000067182.3	692.25760	527.89960	0.39090	3.68300	2.62110	K562	SRPK2
TNFRSF1A	ENSG00000067182.3	195.80270	279.43790	-0.51310	2.77250	1.60650	K562	SRSF7
TNFRSF1A	ENSG00000067182.3	303.61540	475.44490	-0.64700	4.59460	2.79200	K562	SSRP1
TNFRSF1A	ENSG00000067182.3	240.20650	434.85250	-0.85630	6.48230	4.48950	K562	STAU1
TNFRSF1A	ENSG00000067182.3	253.12570	538.22140	-1.08830	5.25500	3.08210	K562	SUPT6H
TNFRSF1A	ENSG00000067182.3	292.52840	173.93450	0.74990	3.95710	2.72610	K562	SUPV3L1
TNFRSF1A	ENSG00000067182.3	204.88660	137.36070	0.57680	2.59650	1.81760	K562	U2AF2
TNFRSF1A	ENSG00000067182.3	193.64090	473.76350	-1.29080	16.81620	14.67220	K562	WDR3
TNFRSF1A	ENSG00000067182.3	311.12660	492.66330	-0.66310	7.28410	5.97270	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TNFRSF1A is not available on ENCORE database.

10 RBPs can affect the splicing of TNFRSF1A :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092			6439763	6439877	6442234	6442313	-0.12400	0.00000	0.00004	excluded	HepG2	U2AF1
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092			6439763	6439877	6442234	6442313	-0.06700	0.00190	0.02424	excluded	HepG2	U2AF2
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092			6439763	6439877	6442234	6442313	-0.08400	0.00011	0.01877	excluded	HepG2	PCBP2
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092			6439763	6439877	6442234	6442313	-0.06300	0.00062	0.02114	excluded	HepG2	SF3A3
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092			6439763	6439877	6442234	6442313	-0.07100	0.00020	0.01945	excluded	HepG2	TIAL1
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440126			6439607	6439877	6442234	6442313	0.10900	0.00004	0.01024	included	HepG2	RBFOX2
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092			6439763	6439877	6442234	6442313	-0.20900	0.00000	0.00000	excluded	HepG2	PCBP1
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092			6439763	6439877	6442234	6442313	-0.06000	0.00122	0.05393	excluded	HepG2	SF3B4
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6439432	6439461			6438943	6439232	6439763	6439877	-0.21200	0.00143	0.02689	excluded	K562	U2AF2
SE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092			6439763	6439877	6442234	6442313	-0.05800	0.00122	0.07014	excluded	HepG2	SRSF9
A3SS	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440202			6440018	6440092	6442234	6442336	0.07200	0.00315	0.01925	longer	K562	AQR
A3SS	TNFRSF1A	ENSG00000067182.3	chr12	-	6442234	6442351			6442234	6442313	6442532	6442608	0.08900	0.00406	0.02407	longer	K562	AQR
A3SS	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440126			6440018	6440092	6442234	6442313	0.05500	0.00049	0.02263	longer	HepG2	U2AF1
MXE	TNFRSF1A	ENSG00000067182.3	chr12	-	6440018	6440092	6442234	6442351	6439763	6439877	6442532	6442608	0.07000	0.01129	0.06982	1included	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TNFRSF1A

General Information

Functions

Localization

Domains (AlphaFold: TNFRSF1A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TNFRSF1A is not avaliable on ENCORE database.

26 proteins are bound to TNFRSF1A RNA:

eCLIP assay for TNFRSF1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TNFRSF1A is not available on ENCORE database.

126 RBPs can affect the gene expression of TNFRSF1A :

The Knockdown/knockout RNA-Seq assay for TNFRSF1A is not available on ENCORE database.

10 RBPs can affect the splicing of TNFRSF1A :

The Knockdown/knockout RNA-Seq assay for TNFRSF1A is not avaliable on ENCORE database.