PSD

General Information

Gene Name       : PSD
Gene ID             : ENSG00000059915.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PSD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PSDENSG00000059915.160.010.110.06ENCSR000AEF
HepG2PSDENSG00000059915.160.290.190.24ENCSR985KAT
K562PSDENSG00000059915.160.460.270.36ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PSD is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on PSD RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for PSD is not avaliable on ENCORE database.






NO known proteins are bound to PSD RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for PSD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PSD is not available on ENCORE database.

  • 30 RBPs can affect the levels of PSD.  








The Knockdown/knockout RNA-Seq assay for PSD is not available on ENCORE database.





30 RBPs can affect the gene expression of PSD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PSDENSG00000059915.1266.6284018.898101.817804.774703.48090HepG2CCAR1
PSDENSG00000059915.12162.8654024.490602.7333022.7992021.30250HepG2CKAP4
PSDENSG00000059915.1234.218108.144702.070703.134502.09510HepG2DDX59
PSDENSG00000059915.1293.3570024.313901.940906.998206.05350HepG2DDX6
PSDENSG00000059915.1226.526708.348501.667802.294301.64810HepG2DNAJC21
PSDENSG00000059915.12139.0214013.286803.387107.076605.79790HepG2EIF4G2
PSDENSG00000059915.12129.747808.505003.9312024.0387021.38370HepG2FASTKD2
PSDENSG00000059915.1264.808008.130302.994708.723907.62980HepG2GPKOW
PSDENSG00000059915.1235.5214010.792301.718602.745701.43570HepG2ILF3
PSDENSG00000059915.1265.2889026.215401.316302.915702.27070HepG2MATR3
PSDENSG00000059915.1258.8586014.446802.026405.416903.14270HepG2PHF6
PSDENSG00000059915.1241.9368010.751801.963503.838702.41450HepG2PRPF6
PSDENSG00000059915.1238.2485015.745201.280402.248701.74570HepG2PTBP1
PSDENSG00000059915.1259.5763013.314602.161605.609504.79990HepG2PUF60
PSDENSG00000059915.1230.119308.263501.865802.409101.48320HepG2SRSF3
PSDENSG00000059915.1280.2379026.361501.605705.371803.65420HepG2SSRP1
PSDENSG00000059915.1288.9616016.301102.448109.795707.65900HepG2STAU1
PSDENSG00000059915.1234.4492014.127901.285802.140401.40350HepG2TIA1
PSDENSG00000059915.1237.629809.126302.043704.130203.46920HepG2TRIM56
PSDENSG00000059915.1229.638909.980601.570202.392401.38230HepG2XPO5
PSDENSG00000059915.129.1978032.75880-1.832503.249702.67120HepG2ZNF622
PSDENSG00000059915.1219.9094061.88920-1.636203.306302.67610K562AQR
PSDENSG00000059915.1222.3996089.26940-1.994707.618706.02720K562CELF1
PSDENSG00000059915.12133.3252072.570000.877403.142602.14440K562EIF4G2
PSDENSG00000059915.1217.0041046.25060-1.443603.070701.86680K562GLRX3
PSDENSG00000059915.1238.5518077.34600-1.004502.899501.73760K562MSI2
PSDENSG00000059915.1252.2341020.334401.361002.917601.44960K562PHF6
PSDENSG00000059915.1245.0664018.669501.271302.402801.56650K562PSIP1
PSDENSG00000059915.1228.0445060.48230-1.108802.191501.69680K562PUS1
PSDENSG00000059915.1221.8540053.30820-1.286502.992702.14740K562SF3A3
PSDENSG00000059915.1253.5612025.508001.070102.071301.37050K562TIA1
PSDENSG00000059915.1229.8572057.29180-0.940202.052901.42840K562UPF1
PSDENSG00000059915.1229.9189069.72870-1.220703.490802.50250K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PSD is not available on ENCORE database.






No RBPs affect the alternative splcing events of PSD on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PSD is not avaliable on ENCORE database.