CYB5R4

General Information

Gene Name       : CYB5R4
Gene ID             : ENSG00000065615.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CYB5R4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CYB5R4ENSG00000065615.1320.4916.7318.61ENCSR000AEF
HepG2CYB5R4ENSG00000065615.133.256.624.94ENCSR985KAT
K562CYB5R4ENSG00000065615.1313.289.9411.61ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CYB5R4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CYB5R4 RNA is bound by 7 proteins.  







eCLIP assay for CYB5R4 is not avaliable on ENCORE database.





7 proteins are bound to CYB5R4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr68456941184569504+5'-UTR,CDS4.919955.35746HepG2DDX3X
chr68456944484569502+5'-UTR4.036183.70637K562DDX3X
chr68460324084603320+CDS,intron-Proximal3.768545.42720K562UCHL5
chr68460324084603337+CDS,intron-Proximal3.541146.55026K562ZNF622
chr68464085584641010+intron-Distal4.484065.31925HepG2QKI
chr68458108284581151+intron-Distal5.756107.47823K562QKI
chr68461190484611945+intron-Distal4.111313.30696K562EXOSC5
chr68463433984634425+intron-Distal,intron-Proximal3.745613.26999K562KHSRP
chr68461565884615735+intron-Distal4.740656.87194K562HNRNPM
chr68461556884615631+intron-Distal4.227654.53244K562HNRNPM
chr68464082584640963+intron-Distal3.378314.46994K562QKI
chr68461208584612118+intron-Distal4.118213.59909K562EXOSC5
chr68461573584615789+intron-Distal4.675306.61547K562HNRNPM
chr68465203684652109+intron-Distal3.996853.36385K562UCHL5
chr68461545384615552+intron-Distal5.105227.38693K562EXOSC5
chr68461160684611676+intron-Distal4.611314.48623K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CYB5R4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CYB5R4 is not available on ENCORE database.

  • 61 RBPs can affect the levels of CYB5R4.  








The Knockdown/knockout RNA-Seq assay for CYB5R4 is not available on ENCORE database.





61 RBPs can affect the gene expression of CYB5R4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CYB5R4ENSG00000065615.9336.42660249.322600.432202.688502.08850HepG2ACO1
CYB5R4ENSG00000065615.9156.76360227.02910-0.534302.267401.36390HepG2ADAR
CYB5R4ENSG00000065615.9656.65580302.218401.1194010.601609.62770HepG2AKAP1
CYB5R4ENSG00000065615.9266.27820437.47060-0.716306.677705.68300HepG2AUH
CYB5R4ENSG00000065615.9215.08880363.17090-0.755704.108802.90900HepG2CCAR1
CYB5R4ENSG00000065615.9332.20380237.577200.483602.221201.52410HepG2CIRBP
CYB5R4ENSG00000065615.9243.19320341.92680-0.491602.004101.44020HepG2CELF1
CYB5R4ENSG00000065615.9238.55710367.72420-0.624305.587304.58430HepG2DAZAP1
CYB5R4ENSG00000065615.9297.06490230.584500.365402.049501.32270HepG2DDX19B
CYB5R4ENSG00000065615.9287.02460195.181200.556302.709702.03800HepG2DDX21
CYB5R4ENSG00000065615.9176.91380238.53240-0.431101.888601.31220HepG2DKC1
CYB5R4ENSG00000065615.9160.71860226.56500-0.495402.622901.98520HepG2DNAJC2
CYB5R4ENSG00000065615.9237.78000164.266200.533502.286701.45710HepG2EIF3D
CYB5R4ENSG00000065615.9275.77870184.241200.581803.088001.95040HepG2EIF3G
CYB5R4ENSG00000065615.9420.40320243.626500.787006.786605.48090HepG2EWSR1
CYB5R4ENSG00000065615.9381.95330258.370300.563902.384001.66540HepG2FIP1L1
CYB5R4ENSG00000065615.9154.80010247.28600-0.675803.134002.42760HepG2G3BP1
CYB5R4ENSG00000065615.9112.54300249.44790-1.148306.808905.83190HepG2GPKOW
CYB5R4ENSG00000065615.9312.79650230.815400.438401.864501.32220HepG2HNRNPA1
CYB5R4ENSG00000065615.9176.34850292.41180-0.729604.400703.51900HepG2HNRNPF
CYB5R4ENSG00000065615.9143.35940238.05250-0.731603.343402.65820HepG2HNRNPLL
CYB5R4ENSG00000065615.9152.71180260.50640-0.770505.108004.13820HepG2ILF2
CYB5R4ENSG00000065615.9329.25290209.095600.654903.842902.89380HepG2MSI2
CYB5R4ENSG00000065615.9186.23410274.46680-0.559502.387101.79640HepG2NCBP2
CYB5R4ENSG00000065615.9317.53980227.059800.483802.798802.18960HepG2PCBP1
CYB5R4ENSG00000065615.9429.01660264.117600.699803.616602.23480HepG2PRPF6
CYB5R4ENSG00000065615.9330.96350212.758900.637403.586402.67940HepG2PRPF8
CYB5R4ENSG00000065615.9381.26630231.028600.722606.125405.37430HepG2PTBP1
CYB5R4ENSG00000065615.9649.35880242.455301.4212011.4222010.06220HepG2RAVER1
CYB5R4ENSG00000065615.9241.91180419.80980-0.795307.114606.37440HepG2RBM22
CYB5R4ENSG00000065615.9315.84860227.096300.475802.324901.70140HepG2RBM25
CYB5R4ENSG00000065615.9401.02750257.123600.641104.735204.06190HepG2NELFE
CYB5R4ENSG00000065615.9328.89330239.455700.457802.458101.87300HepG2RECQL
CYB5R4ENSG00000065615.9329.99290210.470000.648703.470002.60360HepG2RRP9
CYB5R4ENSG00000065615.9707.22760474.159100.576706.929206.23610HepG2SRFBP1
CYB5R4ENSG00000065615.9417.10860251.077000.732206.215605.57650HepG2SRSF1
CYB5R4ENSG00000065615.9365.93850253.530400.529302.269901.37280HepG2SRSF3
CYB5R4ENSG00000065615.9199.38940287.26500-0.526802.460201.80010HepG2SRSF7
CYB5R4ENSG00000065615.9317.25940204.256100.635204.607603.92830HepG2SRSF9
CYB5R4ENSG00000065615.9322.29930411.68130-0.353102.203501.73300HepG2SSB
CYB5R4ENSG00000065615.9109.01510247.86050-1.185007.215706.47730HepG2TIAL1
CYB5R4ENSG00000065615.9141.24400250.02050-0.823906.083805.30550HepG2TRIM56
CYB5R4ENSG00000065615.9355.44480221.011900.685403.734103.00700HepG2U2AF1
CYB5R4ENSG00000065615.9421.25750296.797100.505104.267703.62780HepG2ZNF622
CYB5R4ENSG00000065615.9532.66540647.99310-0.282702.024601.52490K562AGGF1
CYB5R4ENSG00000065615.9609.44600893.62380-0.552202.488201.92530K562AQR
CYB5R4ENSG00000065615.9526.63100707.43340-0.425803.911302.80860K562ATP5C1
CYB5R4ENSG00000065615.9715.90950547.050700.388002.593401.35650K562CIRBP
CYB5R4ENSG00000065615.9912.04240728.058800.324902.280101.67940K562DDX47
CYB5R4ENSG00000065615.9592.64320725.61920-0.292002.250601.47180K562DKC1
CYB5R4ENSG00000065615.9747.64010401.286000.897608.415406.44200K562EIF3D
CYB5R4ENSG00000065615.9545.41530402.185600.439403.283102.63260K562FXR1
CYB5R4ENSG00000065615.9633.64120435.326900.541503.158902.39510K562G3BP2
CYB5R4ENSG00000065615.9260.11170353.80130-0.443802.253501.53620K562GPKOW
CYB5R4ENSG00000065615.9246.71540345.16860-0.484502.481901.41110K562HNRNPF
CYB5R4ENSG00000065615.9796.35170620.197800.360603.131802.18420K562HNRNPU
CYB5R4ENSG00000065615.9293.89960535.34910-0.865209.473207.66530K562MATR3
CYB5R4ENSG00000065615.9369.36420539.34790-0.546205.334804.23660K562MTPAP
CYB5R4ENSG00000065615.9386.23840561.88780-0.540802.853701.95570K562NAA15
CYB5R4ENSG00000065615.91480.749801153.553500.360103.009801.44680K562NOL12
CYB5R4ENSG00000065615.9671.05530477.298300.491403.622002.50510K562PCBP2
CYB5R4ENSG00000065615.9606.66670364.674600.734206.204605.08110K562PRPF8
CYB5R4ENSG00000065615.9713.00940521.173900.452103.883503.10950K562PTBP1
CYB5R4ENSG00000065615.9501.36080651.53570-0.378002.910102.30380K562RBM15
CYB5R4ENSG00000065615.9753.22170371.492201.019607.077405.75510K562RPS19
CYB5R4ENSG00000065615.9359.70300225.522600.673403.431802.30600K562RPS3
CYB5R4ENSG00000065615.9253.42870452.94000-0.837708.467906.93260K562SF3B4
CYB5R4ENSG00000065615.9383.16750510.91990-0.415102.551701.86870K562SRSF1
CYB5R4ENSG00000065615.9213.00390333.38290-0.646303.480202.42520K562TIAL1
CYB5R4ENSG00000065615.9253.29240354.09150-0.483302.310801.45810K562TRIM56
CYB5R4ENSG00000065615.9720.559401006.88870-0.482702.053601.32230K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CYB5R4 is not available on ENCORE database.





14 RBPs can affect the splicing of CYB5R4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.276000.001760.03314includedK562SF3B4
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.286000.000000.00017includedHepG2RBM22
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.180000.000010.00738includedK562WDR3
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.157000.000190.00858includedK562AKAP8L
SECYB5R4ENSG00000065615.9chr6+846358548463605084634188846343118464431384644454-0.108000.000070.01079excludedK562XRCC6
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.333000.000000.00000includedK562AQR
SECYB5R4ENSG00000065615.9chr6+846502338465032084649755846499258466501684665181-0.067000.010490.08442excludedK562AQR
SECYB5R4ENSG00000065615.9chr6+846241348462416784618727846188098462772384627784-0.111000.007070.06168excludedK562AQR
SECYB5R4ENSG00000065615.9chr6+846358548463605084634188846343118464431384644454-0.163000.000090.00562excludedK562FXR1
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.170000.000010.00029includedK562PUS1
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.103000.000010.00433includedK562SBDS
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.113000.000060.00888includedK562HNRNPUL1
SECYB5R4ENSG00000065615.9chr6+846443138464445484634188846343118464594284646095-0.119000.002490.07490excludedK562TARDBP
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.113000.003800.07431includedK562RBM15
SECYB5R4ENSG00000065615.9chr6+8463585484636050846341888463431184644313846444540.230000.000000.00005includedK562ZC3H8
SECYB5R4ENSG00000065615.9chr6+846358548463605084634188846343118464431384644454-0.112000.003110.09347excludedK562PTBP1
MXECYB5R4ENSG00000065615.9chr6+8462413484624167846306808463089484618727846188098463418884634311-0.068000.001330.011682includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CYB5R4 is not avaliable on ENCORE database.