RALBP1

General Information

Gene Name       : RALBP1
Gene ID             : ENSG00000017797.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RALBP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RALBP1ENSG00000017797.1227.9328.7428.34ENCSR000AEF
HepG2RALBP1ENSG00000017797.1216.7120.2918.50ENCSR985KAT
K562RALBP1ENSG00000017797.1240.5541.2440.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RALBP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RALBP1 RNA is bound by 29 proteins.  







eCLIP assay for RALBP1 is not avaliable on ENCORE database.





29 proteins are bound to RALBP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1895364889536615+3'-UTR4.502694.78313HepG2UPF1
chr1895129979513079+3'-UTR,CDS3.408378.60308K562YBX3
chr1895369429537006+3'-UTR3.397237.82337K562IGF2BP1
chr1895368489536942+3'-UTR4.2290216.54484K562IGF2BP1
chr1895362969536373+3'-UTR3.8266610.28581K562IGF2BP2
chr1895365909536662+3'-UTR3.999418.62096K562UPF1
chr1895365719536630+3'-UTR3.683059.69051K562YBX3
chr1895369799537022+3'-UTR3.293824.02462K562TIA1
chr1895359609536037+3'-UTR3.7813311.36579K562PUM2
chr1895366949536742+3'-UTR3.807516.85451K562YBX3
chr1895365049536568+3'-UTR3.417417.42053K562IGF2BP1
chr1895369319537016+3'-UTR3.7485715.32793K562FAM120A
chr1894756089475688+5'-UTR,intron-Distal3.6354729.04234K562ZNF622
chr1894755719475687+5'-UTR,intron-Distal3.328838.10606K562RBM15
chr1894756479475676+5'-UTR,intron-Distal4.215073.45943HepG2BCLAF1
chr1894756149475676+5'-UTR,intron-Distal4.303565.13243HepG2GRWD1
chr1894756229475689+5'-UTR,intron-Distal5.2737623.21591K562UCHL5
chr1894756169475681+5'-UTR,intron-Distal3.487867.68059K562GRWD1
chr1894755389475669+5'-UTR,intron-Distal3.7610510.79860K562PUM1
chr1894755649475658+5'-UTR,intron-Distal3.095295.64585K562ZNF800
chr1894756289475686+5'-UTR,intron-Distal3.7060510.41546K562BUD13
chr1894755649475628+5'-UTR,intron-Distal3.119109.60241K562BUD13
chr1894755559475676+5'-UTR,intron-Distal3.133203.23164HepG2PRPF4
chr1894755649475622+5'-UTR,intron-Distal4.2224218.56668K562UCHL5
chr1894755519475671+5'-UTR,intron-Distal3.258975.13820HepG2NCBP2
chr1894756199475695+5'-UTR,intron-Distal,intron-Proximal4.792487.50510K562DROSHA
chr1895356809535732+CDS3.588875.56491HepG2BCLAF1
chr1895333329533429+CDS,intron-Proximal4.9913413.15686HepG2BCLAF1
chr1895309099530939+CDS3.226336.93682K562UCHL5
chr1895170369517135+CDS4.1125120.57324K562ZNF622
chr1895333329533342+CDS,intron-Proximal3.664129.25079K562ZNF622
chr1895172429517304+CDS,intron-Proximal3.0895715.40410K562ZNF622
chr1895170289517075+CDS3.3968911.22685K562ZNF800
chr1895172089517272+CDS4.764125.03746HepG2BCLAF1
chr1895246149524652+CDS3.108734.57383K562YBX3
chr1895356909535752+CDS3.154645.29004K562GRWD1
chr1895221579522256+CDS,intron-Proximal3.1680922.03328K562ZNF622
chr1895356889535776+CDS4.1528813.25255K562UCHL5
chr1895224129522427+CDS4.498964.14433K562ZNF800
chr1895131619513215+CDS3.547847.66618K562FXR2
chr1895169299517134+CDS3.394934.56280K562TRA2A
chr1895223999522447+CDS3.130353.06626K562GRWD1
chr1895169349516985+CDS3.630113.87469HepG2BCLAF1
chr1895170379517140+CDS4.8760310.64218HepG2BCLAF1
chr1895170759517137+CDS4.631104.50566HepG2FXR2
chr1895130959513132+CDS3.460243.86052K562YBX3
chr1895357459535833+CDS3.9049513.03959K562PUM1
chr1895257669525817+CDS4.3934112.39089K562ZNF622
chr1895356769535743+CDS3.6943610.36894K562PUM1
chr1895224759522506+CDS3.329744.05316K562GRWD1
chr1895223859522469+CDS3.425537.51817K562PUM1
chr1895171899517242+CDS3.321189.77890K562ZNF622
chr1895221889522229+CDS3.268933.25727K562METAP2
chr1895224759522508+CDS,intron-Proximal3.391896.74947HepG2BCLAF1
chr1895356689535796+CDS,intron-Proximal3.9752014.09511K562ZNF800
chr1895336709533732+CDS,intron-Proximal3.672067.95036K562AQR
chr1895257999525846+CDS3.212775.39816K562LIN28B
chr1895357529535839+CDS4.859658.12426K562GRWD1
chr1895222979522341+CDS3.532838.11704K562UCHL5
chr1895170119517091+CDS3.8792920.16260K562UCHL5
chr1895333429533391+CDS3.5384911.99289K562ZNF622
chr1895130799513095+CDS4.366025.60746K562YBX3
chr1895169509517085+CDS3.052329.19030K562PUM1
chr1895221589522297+CDS4.6927125.96465K562UCHL5
chr1895309099530941+CDS,intron-Proximal5.250268.41647HepG2BCLAF1
chr1895257809525845+CDS4.080345.79432HepG2BCLAF1
chr1895257419525777+CDS3.072655.41277K562UCHL5
chr1895245909524609+CDS,intron-Proximal3.593116.39464HepG2BCLAF1
chr1895169579517067+CDS3.412707.50653K562CPSF6
chr1895222479522272+CDS3.567343.27569HepG2BCLAF1
chr1895222219522333+CDS4.826246.26332HepG2GRWD1
chr1895309259530939+CDS3.023915.62120K562ZNF622
chr1895223909522448+CDS3.629405.11155K562YBX3
chr1895221679522221+CDS4.326244.45558HepG2GRWD1
chr1895221599522205+CDS3.201464.38893K562ZNF800
chr1895221709522239+CDS5.8262612.09921HepG2BCLAF1
chr1895357879535831+CDS3.193015.10726K562UCHL5
chr1895356819535744+CDS4.631965.35719HepG2GRWD1
chr1895170759517141+CDS4.1101617.38253K562ZNF800
chr1895222919522339+CDS3.241304.74886HepG2BCLAF1
chr1895170919517148+CDS4.4386619.41573K562UCHL5
chr1895221599522237+CDS3.294374.37448K562PUM1
chr1895337809533823+CDS3.273787.19724K562ZNF800
chr1895170859517151+CDS3.9213616.41674K562PUM1
chr1895170279517134+CDS3.4908912.06797K562GRWD1
chr1895357709535841+CDS3.102513.40321HepG2GRWD1
chr1895337489533811+CDS3.161098.39218K562UCHL5
chr1895168429516922+CDS,intron-Proximal3.1742114.74792K562UCHL5
chr1894841279484155+intron-Distal3.846053.01445K562EXOSC5
chr1894829949483027+intron-Distal4.053573.01456K562EXOSC5
chr1894825999482661+intron-Distal3.683844.91094K562EXOSC5
chr1894862869486352+intron-Distal3.524603.30744K562PTBP1
chr1894824979482546+intron-Distal3.910705.20960K562EXOSC5
chr1894755539475617+intron-Distal3.569393.56099K562TRA2A
chr1894832329483282+intron-Distal3.714544.91037K562EXOSC5
chr1895188599518897+intron-Distal3.190133.06830K562UPF1
chr1894862839486360+intron-Distal4.929746.23953HepG2PCBP2
chr1894833179483414+intron-Distal4.373719.63457K562KHSRP
chr1894936079493673+intron-Distal3.714183.06853K562LIN28B
chr1894842009484246+intron-Distal4.155043.30687K562EXOSC5
chr1894987499498840+intron-Distal4.949615.61339K562QKI
chr1894828839482941+intron-Distal3.382944.74379K562EXOSC5
chr1894835299483575+intron-Distal4.775055.12361K562EXOSC5
chr1895334639533532+intron-Proximal5.221837.28294K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RALBP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RALBP1 is not available on ENCORE database.

  • 84 RBPs can affect the levels of RALBP1.  








The Knockdown/knockout RNA-Seq assay for RALBP1 is not available on ENCORE database.





84 RBPs can affect the gene expression of RALBP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RALBP1ENSG00000017797.71529.133601307.553700.225702.473701.89350HepG2ACO1
RALBP1ENSG00000017797.7882.736801654.02840-0.9059010.597509.62390HepG2AKAP1
RALBP1ENSG00000017797.71438.412402444.16830-0.764907.677406.03700HepG2CCAR1
RALBP1ENSG00000017797.7967.884901300.20900-0.425803.317102.47500HepG2CIRBP
RALBP1ENSG00000017797.71104.482101384.46170-0.326002.277301.64570HepG2CPSF6
RALBP1ENSG00000017797.71896.914201588.413200.256003.491002.67570HepG2DAZAP1
RALBP1ENSG00000017797.7571.27050744.91240-0.382902.684901.31890HepG2DDX28
RALBP1ENSG00000017797.71218.139001567.08550-0.363402.818501.79700HepG2DDX5
RALBP1ENSG00000017797.7903.523201361.19700-0.591205.038004.22650HepG2DDX6
RALBP1ENSG00000017797.7825.050801077.27080-0.384805.331004.46930HepG2DNAJC2
RALBP1ENSG00000017797.7683.950401308.34030-0.9358012.2316011.04140HepG2EIF2S1
RALBP1ENSG00000017797.7887.356201445.76750-0.704306.805805.80140HepG2EIF4A3
RALBP1ENSG00000017797.71184.186502168.07170-0.8725027.1167025.56440HepG2ETF1
RALBP1ENSG00000017797.72256.270601746.476200.369402.913902.12370HepG2FIP1L1
RALBP1ENSG00000017797.7588.66430818.53360-0.475603.358101.96640HepG2FKBP4
RALBP1ENSG00000017797.71131.02640915.018400.305702.129901.43220HepG2FUBP3
RALBP1ENSG00000017797.7651.659101296.05660-0.991909.803007.87470HepG2FUS
RALBP1ENSG00000017797.7651.86970899.70190-0.464903.435202.42440HepG2GEMIN5
RALBP1ENSG00000017797.71053.630801569.42960-0.574905.126804.27300HepG2GPKOW
RALBP1ENSG00000017797.7518.863701097.20020-1.0804017.7884016.38280HepG2HNRNPA1
RALBP1ENSG00000017797.7699.843401220.45890-0.8023010.879209.58260HepG2HNRNPC
RALBP1ENSG00000017797.71152.239401497.73250-0.378302.819602.18480HepG2HNRNPLL
RALBP1ENSG00000017797.7743.309901205.35000-0.697405.956404.62610HepG2HNRNPM
RALBP1ENSG00000017797.71251.039202580.49280-1.0445013.8498012.02720HepG2LARP4
RALBP1ENSG00000017797.71953.971601467.657600.412802.921702.27610HepG2MATR3
RALBP1ENSG00000017797.7912.912301414.04960-0.631304.733503.69540HepG2MSI2
RALBP1ENSG00000017797.71049.362101337.60860-0.350102.290801.62930HepG2PABPC4
RALBP1ENSG00000017797.7293.966301289.76060-2.1334034.0634030.64590HepG2PRPF6
RALBP1ENSG00000017797.71164.479601503.52880-0.368703.376702.72720HepG2PUF60
RALBP1ENSG00000017797.71811.242401596.051500.182402.136801.60220HepG2PUM1
RALBP1ENSG00000017797.72066.922901594.892300.373904.351003.51960HepG2PUM2
RALBP1ENSG00000017797.71883.416201469.786600.357604.153903.41020HepG2QKI
RALBP1ENSG00000017797.72655.849801856.232100.516708.255906.87940HepG2RBM15
RALBP1ENSG00000017797.7699.814701051.47860-0.587405.052703.60950HepG2RCC2
RALBP1ENSG00000017797.72119.827101668.388700.345403.376902.63260HepG2RPLP0
RALBP1ENSG00000017797.7954.626301194.23570-0.323101.996001.30760HepG2RPS2
RALBP1ENSG00000017797.71106.15430750.317100.559904.132803.19410HepG2RRP9
RALBP1ENSG00000017797.71265.156601079.669500.228602.333501.73380HepG2SAFB2
RALBP1ENSG00000017797.7747.04390986.84240-0.401602.846701.89340HepG2SERBP1
RALBP1ENSG00000017797.71844.036201482.479100.314802.499801.82720HepG2SF3B1
RALBP1ENSG00000017797.73197.463902046.680700.6435020.7110019.67230HepG2SRFBP1
RALBP1ENSG00000017797.72138.024901595.096200.422502.476601.53510HepG2SRSF3
RALBP1ENSG00000017797.71709.391901199.842800.5105010.260309.31390HepG2SRSF9
RALBP1ENSG00000017797.71337.920601776.97440-0.409406.901906.16180HepG2SSB
RALBP1ENSG00000017797.7770.700001167.04830-0.598603.904002.45570HepG2STAU1
RALBP1ENSG00000017797.7921.386101325.64270-0.524807.602106.74820HepG2TAF15
RALBP1ENSG00000017797.7998.667801736.28050-0.797903.995602.72860HepG2TBRG4
RALBP1ENSG00000017797.7838.250401177.96190-0.490805.772805.10100HepG2TIAL1
RALBP1ENSG00000017797.71992.645001494.319200.415103.467802.76940HepG2U2AF1
RALBP1ENSG00000017797.71269.722901471.94700-0.213202.148001.52000HepG2UPF1
RALBP1ENSG00000017797.7253.673101421.10280-2.48600118.18480115.23020HepG2UTP3
RALBP1ENSG00000017797.7689.35840963.67720-0.483303.734502.90110HepG2XRN2
RALBP1ENSG00000017797.7790.693101172.69570-0.5686010.589309.41720HepG2ZC3H8
RALBP1ENSG00000017797.71129.601501618.85610-0.5192011.8235010.88840HepG2ZNF622
RALBP1ENSG00000017797.74792.337003717.438700.366305.403004.65170K562AGGF1
RALBP1ENSG00000017797.72019.314102655.49550-0.395106.292603.97760K562AKAP1
RALBP1ENSG00000017797.75246.758503868.209400.439705.829304.85920K562AKAP8L
RALBP1ENSG00000017797.73229.620604413.33940-0.450505.218904.45740K562AQR
RALBP1ENSG00000017797.74950.444404058.769500.286404.190503.04390K562ATP5C1
RALBP1ENSG00000017797.72937.749103642.30950-0.310102.772801.48930K562CIRBP
RALBP1ENSG00000017797.74001.412104737.02940-0.243503.192801.99810K562CPEB4
RALBP1ENSG00000017797.71631.695702044.04740-0.325104.485302.78590K562DDX27
RALBP1ENSG00000017797.73904.632804901.18940-0.327905.981505.07530K562DDX47
RALBP1ENSG00000017797.71674.124202111.16010-0.334602.632901.74550K562EFTUD2
RALBP1ENSG00000017797.72096.251802955.77530-0.4957010.533408.12300K562EIF2S1
RALBP1ENSG00000017797.71710.074102260.43020-0.402502.766101.73060K562EIF3D
RALBP1ENSG00000017797.71738.282802282.74340-0.393105.419504.31940K562EIF3G
RALBP1ENSG00000017797.71314.926502018.13620-0.6180010.891608.11310K562FUS
RALBP1ENSG00000017797.72358.784403120.40690-0.403704.584403.56610K562GPKOW
RALBP1ENSG00000017797.73370.894804281.82970-0.345103.973603.07000K562GRSF1
RALBP1ENSG00000017797.72597.215503326.91150-0.357204.212402.88660K562HNRNPA1
RALBP1ENSG00000017797.71374.174902661.63350-0.9537022.0313020.42780K562HNRNPC
RALBP1ENSG00000017797.71881.163702725.45900-0.534903.224502.21420K562HNRNPM
RALBP1ENSG00000017797.75379.724304104.976100.390105.097603.91000K562KIF1C
RALBP1ENSG00000017797.71893.721502664.35510-0.492603.558602.48510K562KRR1
RALBP1ENSG00000017797.76025.454104598.632500.389804.104702.96260K562MBNL1
RALBP1ENSG00000017797.74696.505405821.98330-0.309903.164301.95390K562MSI2
RALBP1ENSG00000017797.73154.256003641.91890-0.207402.967102.13030K562MTPAP
RALBP1ENSG00000017797.74680.058503223.322500.537904.654903.41530K562NAA15
RALBP1ENSG00000017797.74443.138904046.563300.134802.106001.44510K562NSUN2
RALBP1ENSG00000017797.72614.203603177.90110-0.281702.486801.56170K562PCBP2
RALBP1ENSG00000017797.7960.870902782.83830-1.5341016.0038012.67400K562PRPF6
RALBP1ENSG00000017797.71825.790702386.42450-0.386303.649202.59120K562PSIP1
RALBP1ENSG00000017797.72769.131803470.01400-0.325503.626602.87820K562PTBP1
RALBP1ENSG00000017797.74892.690703835.874400.351003.713603.09810K562PUS1
RALBP1ENSG00000017797.76461.716403737.753400.7896025.9525024.05870K562RBM15
RALBP1ENSG00000017797.71796.398302177.26090-0.277402.533401.58780K562RCC2
RALBP1ENSG00000017797.71381.616002092.65150-0.599005.717304.53840K562RPS19
RALBP1ENSG00000017797.72178.339602688.83690-0.303802.225901.33660K562RPS3
RALBP1ENSG00000017797.73440.116204090.73140-0.249904.649003.47350K562SRPK2
RALBP1ENSG00000017797.72508.881003401.73530-0.439206.028804.99390K562SRSF1
RALBP1ENSG00000017797.72162.146402595.85960-0.263702.288001.34750K562SRSF4
RALBP1ENSG00000017797.72782.525203442.85420-0.307202.473701.80240K562TARDBP
RALBP1ENSG00000017797.72829.933503321.00160-0.230902.045801.34920K562TIA1
RALBP1ENSG00000017797.71599.831602105.23470-0.396103.309302.18960K562UCHL5
RALBP1ENSG00000017797.73333.856403817.75570-0.195502.904402.03720K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RALBP1 is not available on ENCORE database.





2 RBPs can affect the splicing of RALBP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERALBP1ENSG00000017797.7chr18+9479341947952394756199475689951298895132870.175000.000090.00250includedK562HNRNPC
A3SSRALBP1ENSG00000017797.7chr18+9533317953345495333329533454953083195309390.061000.000010.00008longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RALBP1 is not avaliable on ENCORE database.