ARNTL2

General Information

Gene Name : ARNTL2
Gene ID : ENSG00000029153.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ARNTL2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ARNTL2	ENSG00000029153.14	25.97	23.07	24.52	ENCSR000AEF
HepG2	ARNTL2	ENSG00000029153.14	7.91	14.37	11.14	ENCSR985KAT
K562	ARNTL2	ENSG00000029153.14	0.30	0.27	0.29	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ARNTL2 is not avaliable on ENCORE database.

Proteins bound to RNA

ARNTL2 RNA is bound by 2 proteins.

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eCLIP assay for ARNTL2 is not avaliable on ENCORE database.

2 proteins are bound to ARNTL2 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	27485833	27485984	+	5'-UTR	5.40893	9.60748	HepG2	DDX3X
chr12	27514609	27514770	+	intron-Distal	4.69733	5.20135	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 2 of 2 entries

eCLIP assay for ARNTL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ARNTL2 is not available on ENCORE database.
77 RBPs can affect the levels of ARNTL2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ARNTL2 is not available on ENCORE database.

77 RBPs can affect the gene expression of ARNTL2 :

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Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ARNTL2	ENSG00000029153.10	752.67520	218.67520	1.78310	41.95720	40.59470	HepG2	SRSF1
ARNTL2	ENSG00000029153.10	1108.97630	276.85990	2.00190	35.55950	33.93460	HepG2	AKAP1
ARNTL2	ENSG00000029153.10	1392.72070	734.26010	0.92340	24.95680	23.84400	HepG2	SRFBP1
ARNTL2	ENSG00000029153.10	117.16460	406.03170	-1.79310	21.98310	20.54980	HepG2	BOP1
ARNTL2	ENSG00000029153.10	289.84710	637.52410	-1.13720	20.31480	19.20350	HepG2	SSB
ARNTL2	ENSG00000029153.10	529.60630	223.94230	1.24170	17.33400	16.20230	HepG2	NELFE
ARNTL2	ENSG00000029153.10	178.32240	400.56680	-1.16760	15.82390	14.50790	HepG2	CKAP4
ARNTL2	ENSG00000029153.10	439.08760	196.53440	1.15960	13.98320	12.86570	HepG2	TAF15
ARNTL2	ENSG00000029153.10	455.60500	208.55740	1.12720	13.83630	12.62100	HepG2	RECQL
ARNTL2	ENSG00000029153.10	450.71770	209.50920	1.10510	13.07900	11.94250	HepG2	SF3B4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 77 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ARNTL2 is not available on ENCORE database.

2 RBPs can affect the splicing of ARNTL2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	ARNTL2	ENSG00000029153.10	chr12	+	27529278	27529320			27521194	27521345	27533179	27533337	0.32000	0.00417	0.06566	included	HepG2	U2AF1
MXE	ARNTL2	ENSG00000029153.10	chr12	+	27523061	27523163	27529278	27529349	27521194	27521345	27533179	27533337	-0.59200	0.02152	0.09777	2included	HepG2	U2AF2

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ARNTL2

General Information

Functions

Localization

Domains (AlphaFold: ARNTL2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ARNTL2 is not avaliable on ENCORE database.

2 proteins are bound to ARNTL2 RNA:

eCLIP assay for ARNTL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ARNTL2 is not available on ENCORE database.

77 RBPs can affect the gene expression of ARNTL2 :

The Knockdown/knockout RNA-Seq assay for ARNTL2 is not available on ENCORE database.

2 RBPs can affect the splicing of ARNTL2 :

The Knockdown/knockout RNA-Seq assay for ARNTL2 is not avaliable on ENCORE database.