ARNTL2

General Information

Gene Name       : ARNTL2
Gene ID             : ENSG00000029153.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARNTL2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARNTL2ENSG00000029153.1425.9723.0724.52ENCSR000AEF
HepG2ARNTL2ENSG00000029153.147.9114.3711.14ENCSR985KAT
K562ARNTL2ENSG00000029153.140.300.270.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARNTL2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARNTL2 RNA is bound by 2 proteins.  







eCLIP assay for ARNTL2 is not avaliable on ENCORE database.





2 proteins are bound to ARNTL2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr122748583327485984+5'-UTR5.408939.60748HepG2DDX3X
chr122751460927514770+intron-Distal4.697335.20135HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARNTL2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARNTL2 is not available on ENCORE database.

  • 77 RBPs can affect the levels of ARNTL2.  








The Knockdown/knockout RNA-Seq assay for ARNTL2 is not available on ENCORE database.





77 RBPs can affect the gene expression of ARNTL2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARNTL2ENSG00000029153.10372.81670259.879200.520502.942901.84320HepG2AATF
ARNTL2ENSG00000029153.10192.16440377.05000-0.972404.289703.13590HepG2ABCF1
ARNTL2ENSG00000029153.10520.02830400.602400.376302.942902.31830HepG2ACO1
ARNTL2ENSG00000029153.10232.71390330.51430-0.506202.603601.63520HepG2ADAR
ARNTL2ENSG00000029153.101108.97630276.859902.0019035.5595033.93460HepG2AKAP1
ARNTL2ENSG00000029153.10229.14200402.52730-0.812808.272007.03280HepG2AKAP8L
ARNTL2ENSG00000029153.10403.99150229.092600.818305.626704.52820HepG2ASCC1
ARNTL2ENSG00000029153.10206.63510454.44640-1.137005.307503.99850HepG2BCCIP
ARNTL2ENSG00000029153.10117.16460406.03170-1.7931021.9831020.54980HepG2BOP1
ARNTL2ENSG00000029153.10323.60190465.49750-0.524602.159701.30760HepG2CCAR1
ARNTL2ENSG00000029153.10370.95460217.649100.769105.064904.03690HepG2CIRBP
ARNTL2ENSG00000029153.10178.32240400.56680-1.1676015.8239014.50790HepG2CKAP4
ARNTL2ENSG00000029153.10137.93150270.31600-0.970702.448101.73250HepG2CNOT7
ARNTL2ENSG00000029153.10213.84870339.42650-0.666504.636703.15810HepG2DDX1
ARNTL2ENSG00000029153.10430.55330265.241500.698804.502103.71880HepG2DDX3X
ARNTL2ENSG00000029153.10221.92980321.00940-0.532502.796701.80790HepG2DHX30
ARNTL2ENSG00000029153.10228.57530332.84110-0.542202.947502.22560HepG2DNAJC21
ARNTL2ENSG00000029153.10232.28970329.83530-0.505802.252201.65120HepG2DNAJC2
ARNTL2ENSG00000029153.10291.99290460.98390-0.658805.103304.01750HepG2EIF4G2
ARNTL2ENSG00000029153.10586.50480777.78720-0.407203.740803.05920HepG2ETF1
ARNTL2ENSG00000029153.10510.86340380.770600.423902.111901.43520HepG2FIP1L1
ARNTL2ENSG00000029153.10199.55430373.39430-0.903903.170902.08140HepG2FTO
ARNTL2ENSG00000029153.10425.52700244.161100.801305.771204.79510HepG2FXR1
ARNTL2ENSG00000029153.10361.98200240.440200.590102.743001.85670HepG2G3BP2
ARNTL2ENSG00000029153.10245.81580353.83920-0.525502.697001.69360HepG2GNB2L1
ARNTL2ENSG00000029153.10166.49630422.56540-1.3437012.2711011.01190HepG2GPKOW
ARNTL2ENSG00000029153.10487.99460311.562700.647202.967401.53360HepG2HLTF
ARNTL2ENSG00000029153.10238.64910336.02910-0.493702.337001.73850HepG2HNRNPA1
ARNTL2ENSG00000029153.10171.23400373.74810-1.126109.605108.37780HepG2HNRNPC
ARNTL2ENSG00000029153.10313.20030456.76590-0.544404.361903.48400HepG2HNRNPF
ARNTL2ENSG00000029153.10323.36780444.45720-0.458903.234502.51050HepG2HNRNPL
ARNTL2ENSG00000029153.10265.39420403.26100-0.603603.490702.79310HepG2HNRNPLL
ARNTL2ENSG00000029153.10348.23200262.827600.405802.327201.45360HepG2HNRNPM
ARNTL2ENSG00000029153.10245.66800371.27870-0.595803.058202.42360HepG2HNRNPU
ARNTL2ENSG00000029153.10245.82810449.78750-0.871608.225007.03810HepG2IGF2BP1
ARNTL2ENSG00000029153.10416.99120230.303400.856406.491205.49630HepG2IGF2BP2
ARNTL2ENSG00000029153.10798.98570216.050501.886703.679802.54440HepG2IGF2BP3
ARNTL2ENSG00000029153.10181.55360379.25270-1.062808.531307.31190HepG2ILF2
ARNTL2ENSG00000029153.10328.15080491.20370-0.582002.505901.71700HepG2LARP4
ARNTL2ENSG00000029153.10245.36880363.97890-0.568903.340302.00390HepG2LIN28B
ARNTL2ENSG00000029153.10379.85150244.245900.637002.692102.04480HepG2MAGOH
ARNTL2ENSG00000029153.10433.98760245.630000.821105.441404.58130HepG2MATR3
ARNTL2ENSG00000029153.10253.06150357.56090-0.498702.333601.64450HepG2NSUN2
ARNTL2ENSG00000029153.10345.36270223.978600.624703.479602.67580HepG2PABPC4
ARNTL2ENSG00000029153.10261.70480197.757600.404101.851201.33750HepG2PCBP1
ARNTL2ENSG00000029153.10205.18780307.73130-0.584702.507301.51890HepG2PCBP2
ARNTL2ENSG00000029153.10517.71240323.502200.678303.666202.27540HepG2PRPF6
ARNTL2ENSG00000029153.10429.43050201.216201.0936012.8180011.81260HepG2PTBP1
ARNTL2ENSG00000029153.10385.30720489.80760-0.346202.281101.67030HepG2PUM2
ARNTL2ENSG00000029153.10386.37230217.942500.825906.683205.77450HepG2QKI
ARNTL2ENSG00000029153.10979.27510296.968701.721308.454207.26500HepG2RAVER1
ARNTL2ENSG00000029153.10174.75940339.47330-0.957905.747804.21480HepG2RCC2
ARNTL2ENSG00000029153.10529.60630223.942301.2417017.3340016.20230HepG2NELFE
ARNTL2ENSG00000029153.10455.60500208.557401.1272013.8363012.62100HepG2RECQL
ARNTL2ENSG00000029153.10361.44970491.99690-0.444902.607201.94170HepG2RPLP0
ARNTL2ENSG00000029153.10123.02250195.08000-0.665102.150601.60210HepG2RPS19
ARNTL2ENSG00000029153.10257.14550385.54300-0.584303.465402.56940HepG2RPS2
ARNTL2ENSG00000029153.10155.31120330.65320-1.090209.313808.24130HepG2SAFB2
ARNTL2ENSG00000029153.10450.71770209.509201.1051013.0790011.94250HepG2SF3B4
ARNTL2ENSG00000029153.10319.34940442.67040-0.471103.659102.87090HepG2SLBP
ARNTL2ENSG00000029153.10185.46130288.99380-0.639902.966701.32350HepG2SND1
ARNTL2ENSG00000029153.10313.26330444.12720-0.503601.991101.33340HepG2SNRNP70
ARNTL2ENSG00000029153.101392.72070734.260100.9234024.9568023.84400HepG2SRFBP1
ARNTL2ENSG00000029153.10752.67520218.675201.7831041.9572040.59470HepG2SRSF1
ARNTL2ENSG00000029153.10252.93700448.74540-0.827108.643407.53000HepG2SRSF7
ARNTL2ENSG00000029153.10262.98980177.897900.563903.287902.69680HepG2SRSF9
ARNTL2ENSG00000029153.10289.84710637.52410-1.1372020.3148019.20350HepG2SSB
ARNTL2ENSG00000029153.10439.08760196.534401.1596013.9832012.86570HepG2TAF15
ARNTL2ENSG00000029153.10243.52230393.02880-0.690604.514603.61710HepG2TARDBP
ARNTL2ENSG00000029153.10403.15280180.609001.1584013.0667011.27610HepG2TIA1
ARNTL2ENSG00000029153.10164.70710360.84970-1.131507.089606.35660HepG2TIAL1
ARNTL2ENSG00000029153.10179.54420363.98630-1.019506.332505.54190HepG2TRIM56
ARNTL2ENSG00000029153.1095.06920262.80760-1.467008.151806.85210HepG2UCHL5
ARNTL2ENSG00000029153.10385.84710291.856300.402702.418301.85020HepG2UTP3
ARNTL2ENSG00000029153.10446.21020292.023100.611502.773901.50510HepG2XRCC5
ARNTL2ENSG00000029153.10263.15390437.87360-0.734602.894802.15310HepG2XRN2
ARNTL2ENSG00000029153.1019.090004.548502.069202.030601.39730K562EIF2S2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARNTL2 is not available on ENCORE database.





2 RBPs can affect the splicing of ARNTL2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARNTL2ENSG00000029153.10chr12+2752927827529320275211942752134527533179275333370.320000.004170.06566includedHepG2U2AF1
MXEARNTL2ENSG00000029153.10chr12+2752306127523163275292782752934927521194275213452753317927533337-0.592000.021520.097772includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARNTL2 is not avaliable on ENCORE database.