USP2

General Information

Gene Name       : USP2
Gene ID             : ENSG00000036672.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: USP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878USP2ENSG00000036672.150.020.060.04ENCSR000AEF
HepG2USP2ENSG00000036672.157.987.237.61ENCSR985KAT
K562USP2ENSG00000036672.159.259.349.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for USP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • USP2 RNA is bound by 3 proteins.  







eCLIP assay for USP2 is not avaliable on ENCORE database.





3 proteins are bound to USP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11119226367119226421-3'-UTR,intron-Distal4.501343.19904K562TIA1
chr11119226697119226752-3'-UTR,intron-Distal4.413854.56348K562UPF1
chr11119229435119229495-CDS,intron-Distal,intron-Proximal4.600035.01842HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for USP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for USP2 is not available on ENCORE database.

  • 98 RBPs can affect the levels of USP2.  








The Knockdown/knockout RNA-Seq assay for USP2 is not available on ENCORE database.





98 RBPs can affect the gene expression of USP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
USP2ENSG00000036672.11575.08710270.305301.089109.069107.51660HepG2ABCF1
USP2ENSG00000036672.11295.17230187.273400.656304.717003.96330HepG2ACO1
USP2ENSG00000036672.11363.16430186.997100.957507.699506.14190HepG2ADAR
USP2ENSG00000036672.11249.35590172.497400.531501.836401.39330HepG2AKAP1
USP2ENSG00000036672.11279.16760156.364300.836104.777903.42350HepG2AKAP8
USP2ENSG00000036672.11261.90100188.140300.477102.535401.79760HepG2AKAP8L
USP2ENSG00000036672.11275.46630394.91240-0.519703.847103.06280HepG2AUH
USP2ENSG00000036672.11146.15070229.22460-0.649302.875401.95710HepG2BCLAF1
USP2ENSG00000036672.11642.38010187.217101.7786044.4219042.52840HepG2CKAP4
USP2ENSG00000036672.1180.75700138.44480-0.777702.236001.55410HepG2CNOT7
USP2ENSG00000036672.11224.57910463.41490-1.045109.612108.40610HepG2CPSF6
USP2ENSG00000036672.11414.46760162.931101.3469013.9686011.87990HepG2CSTF2
USP2ENSG00000036672.11129.36470281.20670-1.120209.580808.52120HepG2CELF1
USP2ENSG00000036672.11190.36240302.35600-0.667504.884503.94110HepG2DAZAP1
USP2ENSG00000036672.11363.10020166.988201.120509.914808.71600HepG2DDX21
USP2ENSG00000036672.1195.81060181.62130-0.922704.598503.34840HepG2DHX30
USP2ENSG00000036672.11331.31180179.165900.886807.553106.53650HepG2DKC1
USP2ENSG00000036672.1192.19180188.31780-1.030505.207504.27160HepG2DNAJC21
USP2ENSG00000036672.11275.96870186.607400.564403.740103.00360HepG2DNAJC2
USP2ENSG00000036672.11348.09020204.321000.768504.448103.30650HepG2EEF2
USP2ENSG00000036672.1159.31090136.42780-1.201804.946604.16580HepG2EIF2S1
USP2ENSG00000036672.11316.27270204.951500.625803.352502.05970HepG2EIF2S2
USP2ENSG00000036672.11269.20160157.670800.771704.795003.41840HepG2EIF3G
USP2ENSG00000036672.11236.05610150.735400.647002.699702.06800HepG2EIF4A3
USP2ENSG00000036672.11233.97910146.825700.672202.423001.77790HepG2EIF4B
USP2ENSG00000036672.11128.90470285.75220-1.148508.520807.12220HepG2EIF4G2
USP2ENSG00000036672.11297.84380453.39200-0.606205.256304.47480HepG2ETF1
USP2ENSG00000036672.11289.86730182.985700.663604.006403.00270HepG2EWSR1
USP2ENSG00000036672.11473.99610272.916300.796304.476203.51420HepG2FIP1L1
USP2ENSG00000036672.1181.02850215.90890-1.413909.047507.00260HepG2FKBP4
USP2ENSG00000036672.11126.08590464.18990-1.8803011.177009.16820HepG2FTO
USP2ENSG00000036672.11437.25020197.512001.146408.888707.01830HepG2FUS
USP2ENSG00000036672.11342.09570152.186601.168509.187507.99320HepG2FXR1
USP2ENSG00000036672.11332.91670147.673001.172709.852108.21940HepG2GEMIN5
USP2ENSG00000036672.11286.65210128.167601.161207.092105.31260HepG2GRSF1
USP2ENSG00000036672.11319.90750190.121400.750603.751603.01600HepG2HNRNPA1
USP2ENSG00000036672.11369.25000464.16590-0.330002.178201.53650HepG2HNRNPF
USP2ENSG00000036672.11167.97420275.42010-0.713404.977904.09390HepG2HNRNPL
USP2ENSG00000036672.11165.48360501.34160-1.5991019.2866017.84930HepG2HNRNPLL
USP2ENSG00000036672.11417.04270210.062300.9893011.9197010.73500HepG2HNRNPU
USP2ENSG00000036672.11217.18360143.428900.598502.335101.70950HepG2IGF2BP2
USP2ENSG00000036672.11225.84680131.961600.775103.643502.24230HepG2KHDRBS1
USP2ENSG00000036672.111083.04340381.076101.5068021.2818018.96050HepG2LARP4
USP2ENSG00000036672.11303.35690152.240200.994605.462804.54970HepG2MAGOH
USP2ENSG00000036672.11651.38520153.075902.0892030.5951028.67560HepG2MATR3
USP2ENSG00000036672.11296.09340156.668300.918203.104102.43570HepG2NCBP2
USP2ENSG00000036672.11275.24640444.51670-0.691504.394303.45680HepG2NSUN2
USP2ENSG00000036672.1159.92880126.55210-1.078403.625802.59970HepG2PABPC1
USP2ENSG00000036672.11395.01810155.591201.3441017.9677016.63690HepG2PCBP1
USP2ENSG00000036672.11480.47030186.939901.3618012.2153010.26200HepG2PCBP2
USP2ENSG00000036672.11381.18920196.488200.956005.849104.14110HepG2PRPF6
USP2ENSG00000036672.11466.61330200.046901.2218010.898309.43700HepG2PRPF8
USP2ENSG00000036672.11397.45140286.203600.473602.748702.15390HepG2PUF60
USP2ENSG00000036672.11162.76010303.59700-0.899406.587005.56860HepG2PUM2
USP2ENSG00000036672.11112.06780171.45900-0.613502.309601.72930HepG2QKI
USP2ENSG00000036672.11382.29590141.494301.433804.535302.14310HepG2RBM17
USP2ENSG00000036672.11263.00030176.196300.577803.002502.44330HepG2NELFE
USP2ENSG00000036672.11320.24830164.110700.964408.249507.27010HepG2RECQL
USP2ENSG00000036672.11777.97980161.392802.2691051.8116049.77880HepG2RPS19
USP2ENSG00000036672.11474.66060216.477801.132609.857208.42700HepG2RPS2
USP2ENSG00000036672.11258.40840139.061000.893804.165303.18360HepG2RPS3A
USP2ENSG00000036672.11463.77520136.795301.761306.921604.61550HepG2SF1
USP2ENSG00000036672.11466.60740228.616901.029207.890006.71020HepG2SF3A3
USP2ENSG00000036672.11291.96570496.24380-0.765306.116305.10160HepG2SF3B1
USP2ENSG00000036672.11235.89830164.827600.517102.380801.82680HepG2SF3B4
USP2ENSG00000036672.11361.61120132.628201.447004.389502.49560HepG2SFPQ
USP2ENSG00000036672.11160.96840274.43140-0.769705.494104.56310HepG2SLBP
USP2ENSG00000036672.11418.60040218.181500.939909.030207.97460HepG2SMN1
USP2ENSG00000036672.11130.21410428.02440-1.7168026.7791025.63530HepG2SRFBP1
USP2ENSG00000036672.11575.29340172.048101.7414032.8584031.62380HepG2SRSF1
USP2ENSG00000036672.11744.23240282.588301.3970031.8546030.06000HepG2SRSF5
USP2ENSG00000036672.11344.84840169.634501.023407.571105.60210HepG2SSRP1
USP2ENSG00000036672.11199.57460120.982000.722003.187802.00000HepG2STIP1
USP2ENSG00000036672.11597.51750321.377300.8946013.5661012.35990HepG2SUCLG1
USP2ENSG00000036672.11284.04040154.654000.877006.582905.78240HepG2TAF15
USP2ENSG00000036672.11504.07390166.618801.5970010.468408.56440HepG2TBRG4
USP2ENSG00000036672.11667.50140204.173901.7089034.4101033.00590HepG2TIAL1
USP2ENSG00000036672.11276.48190205.935600.424902.291601.76860HepG2TRIM56
USP2ENSG00000036672.11391.58570279.614100.485802.870801.97960HepG2TUFM
USP2ENSG00000036672.11413.25000142.232501.538705.248903.85510HepG2U2AF2
USP2ENSG00000036672.11525.50300198.380901.4053013.6640011.51160HepG2XRCC6
USP2ENSG00000036672.11427.64360254.193700.750404.325803.42450HepG2XRN2
USP2ENSG00000036672.11620.89590327.831800.921305.863604.94190HepG2ZC3H8
USP2ENSG00000036672.11360.72660479.13790-0.409502.037401.51830K562AQR
USP2ENSG00000036672.11288.98530417.82390-0.531902.967602.06260K562BOP1
USP2ENSG00000036672.11480.43830297.003100.693805.099303.84110K562EFTUD2
USP2ENSG00000036672.11283.85010471.28510-0.731507.347806.25780K562EIF2S2
USP2ENSG00000036672.11227.41230153.362600.568302.796001.99550K562EIF3G
USP2ENSG00000036672.11546.21790375.996600.538704.400602.75710K562EXOSC5
USP2ENSG00000036672.11270.32020383.16530-0.503302.689301.78770K562FTO
USP2ENSG00000036672.11390.43300212.602100.876808.155007.18510K562FXR1
USP2ENSG00000036672.1171.96200123.65600-0.781002.436801.78000K562G3BP2
USP2ENSG00000036672.11289.16050191.099900.597403.624002.65450K562MAGOH
USP2ENSG00000036672.11344.88250190.692100.854807.056805.49000K562MATR3
USP2ENSG00000036672.11808.28090617.289300.388802.668201.56060K562MSI2
USP2ENSG00000036672.11328.05320170.007500.948207.163305.56470K562PCBP2
USP2ENSG00000036672.11398.83320289.017900.464502.323401.63410K562PRPF8
USP2ENSG00000036672.11254.74240185.675400.456202.182801.58130K562PTBP1
USP2ENSG00000036672.11804.72230631.865900.348802.142701.42570K562PUF60
USP2ENSG00000036672.11513.37490672.01300-0.388502.519501.50350K562PUM1
USP2ENSG00000036672.11105.86830366.21610-1.7904019.0611017.66720K562PUS1
USP2ENSG00000036672.11268.14590179.897300.575702.198501.31510K562RPS3
USP2ENSG00000036672.11524.45000326.889700.681905.760604.19890K562SAFB
USP2ENSG00000036672.11361.87870182.038600.991208.789407.53610K562SRSF1
USP2ENSG00000036672.11283.96090173.630900.709603.783802.52410K562SRSF4
USP2ENSG00000036672.11561.19450367.959400.608905.531904.36300K562SYNCRIP
USP2ENSG00000036672.11348.24000219.870900.663303.884402.76460K562TIAL1
USP2ENSG00000036672.11257.62400174.445300.562402.633701.57230K562TRA2A
USP2ENSG00000036672.11369.39010584.66580-0.662504.061902.59750K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for USP2 is not available on ENCORE database.





1 RBPs can affect the splicing of USP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSUSP2ENSG00000036672.11chr11-1192288581192289871192288581192289621192294821192295470.211000.000010.00011longerK562AQR
A3SSUSP2ENSG00000036672.11chr11-1192299401192301111192299401192300521192302461192303460.181000.000110.00094longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for USP2 is not avaliable on ENCORE database.