RCN1

General Information

Gene Name       : RCN1
Gene ID             : ENSG00000049449.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RCN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RCN1ENSG00000049449.954.8042.5548.67ENCSR000AEF
HepG2RCN1ENSG00000049449.911.4921.4816.48ENCSR985KAT
K562RCN1ENSG00000049449.94.585.825.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RCN1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RCN1 RNA is bound by 5 proteins.  







eCLIP assay for RCN1 is not avaliable on ENCORE database.





5 proteins are bound to RCN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr113212679032126894+3'-UTR,intron-Proximal3.188024.29729HepG2ZC3H11A
chr113212676632126909+3'-UTR,intron-Proximal4.919335.32242HepG2PABPN1
chr113211267832112785+5'-UTR,CDS,intron-Distal3.4175113.06260HepG2DDX3X
chr113211298132113055+CDS,intron-Distal,intron-Proximal3.429368.70001HepG2PRPF8
chr113211291332112998+CDS,intron-Distal,intron-Proximal3.378404.64860HepG2SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RCN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RCN1 is not available on ENCORE database.

  • 140 RBPs can affect the levels of RCN1.  








The Knockdown/knockout RNA-Seq assay for RCN1 is not available on ENCORE database.





140 RBPs can affect the gene expression of RCN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RCN1ENSG00000049449.41082.751401415.13260-0.386202.262001.40550HepG2ABCF1
RCN1ENSG00000049449.41681.575901076.156700.6438013.0311011.91510HepG2ACO1
RCN1ENSG00000049449.4724.018401085.84020-0.584705.650404.29420HepG2ADAR
RCN1ENSG00000049449.41681.172801298.737600.372302.322901.83100HepG2AKAP1
RCN1ENSG00000049449.41587.634301081.251100.5541010.452009.07800HepG2AKAP8L
RCN1ENSG00000049449.42910.914201074.601201.4376033.4011031.14940HepG2ASCC1
RCN1ENSG00000049449.41211.404301648.60170-0.444607.307006.27830HepG2AUH
RCN1ENSG00000049449.4781.060501232.75810-0.658405.072803.80160HepG2BCCIP
RCN1ENSG00000049449.4659.486701738.90700-1.3988020.6966019.29240HepG2BOP1
RCN1ENSG00000049449.41935.712801368.864600.499803.830502.94450HepG2CALR
RCN1ENSG00000049449.4668.507001020.94350-0.610903.769302.87630HepG2CIRBP
RCN1ENSG00000049449.4491.806201075.96890-1.1295033.2316031.51230HepG2CKAP4
RCN1ENSG00000049449.4582.240601094.79770-0.911004.543503.55990HepG2CNOT7
RCN1ENSG00000049449.43643.326201596.454001.1903028.9428027.03780HepG2CPSF6
RCN1ENSG00000049449.41449.773801165.822100.314402.869001.74330HepG2CPSF7
RCN1ENSG00000049449.42334.767601575.412000.5674012.0766010.91630HepG2CELF1
RCN1ENSG00000049449.41301.479801693.92720-0.380206.727605.64610HepG2DAZAP1
RCN1ENSG00000049449.4819.92610995.31190-0.279702.932102.07610HepG2DDX19B
RCN1ENSG00000049449.4797.306401115.07710-0.483905.841004.21550HepG2DDX1
RCN1ENSG00000049449.4375.132501052.50480-1.4884031.3351029.41960HepG2DDX21
RCN1ENSG00000049449.4564.88340918.32750-0.701105.973004.02700HepG2DDX28
RCN1ENSG00000049449.4861.459101201.81510-0.480404.199102.96060HepG2DDX5
RCN1ENSG00000049449.43053.714201068.685501.5146031.1810029.43890HepG2DDX6
RCN1ENSG00000049449.4813.977001054.57910-0.373602.956101.94800HepG2DHX30
RCN1ENSG00000049449.4834.034801029.60230-0.303902.837102.15220HepG2DKC1
RCN1ENSG00000049449.4544.254201093.40410-1.0065021.8584020.08890HepG2DNAJC21
RCN1ENSG00000049449.4848.905501083.71340-0.352304.626303.81900HepG2DNAJC2
RCN1ENSG00000049449.41601.02780968.989300.724306.648504.95790HepG2AGO1
RCN1ENSG00000049449.42886.982401073.819001.4267048.5584044.89340HepG2EIF2S2
RCN1ENSG00000049449.41270.55660993.752100.354403.128801.98410HepG2EIF3G
RCN1ENSG00000049449.4781.768801135.38490-0.538404.041903.27310HepG2EIF4A3
RCN1ENSG00000049449.4783.988701105.43400-0.495702.861402.16270HepG2EIF4B
RCN1ENSG00000049449.41144.568501671.18680-0.5461010.131308.72500HepG2EIF4G1
RCN1ENSG00000049449.42764.432701892.861600.5463013.2573012.10370HepG2ETF1
RCN1ENSG00000049449.4596.158301051.63830-0.8189011.9751010.27820HepG2EWSR1
RCN1ENSG00000049449.42153.477201584.789900.442303.587901.69060HepG2FMR1
RCN1ENSG00000049449.4608.88650761.82480-0.323302.031001.34840HepG2FUBP3
RCN1ENSG00000049449.4418.523301062.65660-1.3443020.4573018.72950HepG2G3BP1
RCN1ENSG00000049449.42141.668501151.553400.8951014.2170011.94550HepG2GNB2L1
RCN1ENSG00000049449.41603.301901027.449500.6419014.1992012.26910HepG2HDGF
RCN1ENSG00000049449.42271.654301286.016500.820705.928703.82290HepG2HLTF
RCN1ENSG00000049449.4546.17270924.85820-0.759903.975102.31230HepG2HNRNPA0
RCN1ENSG00000049449.42162.605601103.878800.970109.441708.35220HepG2HNRNPA1
RCN1ENSG00000049449.42186.132201556.780900.489709.621908.07670HepG2HNRNPA2B1
RCN1ENSG00000049449.4575.655801227.84930-1.0929018.7529017.11600HepG2HNRNPC
RCN1ENSG00000049449.4573.60650948.24700-0.725203.426101.72620HepG2HNRNPD
RCN1ENSG00000049449.41297.349802354.02650-0.859606.370405.34320HepG2HNRNPF
RCN1ENSG00000049449.41986.355001543.029600.364306.953905.92980HepG2HNRNPL
RCN1ENSG00000049449.4748.356501727.13580-1.2066013.4815012.23330HepG2HNRNPLL
RCN1ENSG00000049449.41593.52570986.215300.6921011.227009.54510HepG2HNRNPM
RCN1ENSG00000049449.4944.484401219.73230-0.369004.601903.83670HepG2HNRNPU
RCN1ENSG00000049449.41119.782802318.08810-1.049707.286706.16330HepG2IGF2BP1
RCN1ENSG00000049449.48724.192802326.759901.9066047.2030044.04030HepG2LARP4
RCN1ENSG00000049449.41498.601101127.948800.409804.133702.73910HepG2LARP7
RCN1ENSG00000049449.4710.866801184.66460-0.736808.350906.33170HepG2LIN28B
RCN1ENSG00000049449.42986.765101152.339201.3739026.7404024.95550HepG2MATR3
RCN1ENSG00000049449.41300.21490837.727000.634103.082501.97010HepG2METAP2
RCN1ENSG00000049449.4699.813601156.95340-0.725307.725606.43890HepG2MSI2
RCN1ENSG00000049449.4869.833501179.48800-0.439302.993002.33520HepG2NCBP2
RCN1ENSG00000049449.42313.956901531.351300.595507.764106.55580HepG2NSUN2
RCN1ENSG00000049449.42325.688201207.341000.9457032.2539029.99560HepG2PARN
RCN1ENSG00000049449.42116.82730980.817101.1097042.1957040.33700HepG2PCBP1
RCN1ENSG00000049449.4739.805301082.67720-0.549403.372801.52320HepG2PHF6
RCN1ENSG00000049449.4585.19270981.59170-0.746203.594101.86020HepG2PNPT1
RCN1ENSG00000049449.41554.152501087.905900.514508.063906.85470HepG2PPIL4
RCN1ENSG00000049449.41679.40850980.716000.7759019.3585017.63660HepG2PRPF4
RCN1ENSG00000049449.4808.632501335.53760-0.723905.252203.61560HepG2PRPF6
RCN1ENSG00000049449.41281.31870998.036200.360404.622103.95520HepG2PTBP1
RCN1ENSG00000049449.42381.383901603.424600.570508.131907.18270HepG2PUF60
RCN1ENSG00000049449.42798.094201702.114800.7170028.9284027.41820HepG2PUM1
RCN1ENSG00000049449.42837.912701700.866000.7385015.4928013.98500HepG2PUM2
RCN1ENSG00000049449.4827.826501096.14220-0.405005.380304.57260HepG2PUS1
RCN1ENSG00000049449.4479.211401080.85920-1.1734025.0386023.42130HepG2QKI
RCN1ENSG00000049449.4851.062901999.58140-1.232404.400402.03100HepG2RBM17
RCN1ENSG00000049449.44486.228101582.072401.5036081.9634079.91990HepG2RBM22
RCN1ENSG00000049449.41357.01730980.963800.468105.066604.18010HepG2RBM25
RCN1ENSG00000049449.41754.075101360.082300.366903.301602.21230HepG2RBM27
RCN1ENSG00000049449.4832.113701104.44300-0.408502.289001.32630HepG2RCC2
RCN1ENSG00000049449.41356.105501034.496700.390405.152104.34530HepG2RECQL
RCN1ENSG00000049449.41381.708002535.20450-0.875606.909905.90200HepG2RPLP0
RCN1ENSG00000049449.4589.003001204.24310-1.031809.541507.89580HepG2RPS10
RCN1ENSG00000049449.41327.54560778.814300.7693011.7431010.58280HepG2RPS19
RCN1ENSG00000049449.41730.227001280.421600.434203.174002.01770HepG2RPS5
RCN1ENSG00000049449.4635.267101086.23260-0.7739016.5506015.17070HepG2SAFB2
RCN1ENSG00000049449.4643.963701034.42500-0.683803.450401.99800HepG2SART3
RCN1ENSG00000049449.4633.973601394.26630-1.1370012.3538010.86970HepG2SF3A3
RCN1ENSG00000049449.4789.676501709.59070-1.1143014.0492012.58870HepG2SF3B1
RCN1ENSG00000049449.41841.564001039.052000.8256022.2234020.81440HepG2SF3B4
RCN1ENSG00000049449.41171.287001537.45240-0.392406.459005.45920HepG2SLBP
RCN1ENSG00000049449.42138.053101266.742500.7551027.1687025.49720HepG2SMN1
RCN1ENSG00000049449.4678.631601249.81410-0.881008.379106.67140HepG2SMNDC1
RCN1ENSG00000049449.45568.608601902.195201.5496011.6913010.09900HepG2SNRNP70
RCN1ENSG00000049449.43733.198001786.875501.0629055.9542054.44580HepG2SRFBP1
RCN1ENSG00000049449.41693.821601084.558600.6431014.0911013.20130HepG2SRSF1
RCN1ENSG00000049449.42931.455501583.158800.8887032.9954031.17550HepG2SRSF5
RCN1ENSG00000049449.41409.408402312.60110-0.714404.854103.97260HepG2SRSF7
RCN1ENSG00000049449.42658.82990882.357601.5913096.2174093.95150HepG2SRSF9
RCN1ENSG00000049449.41317.390101551.40120-0.235902.597502.09510HepG2SSB
RCN1ENSG00000049449.4517.62290954.85400-0.883406.470904.67660HepG2STAU1
RCN1ENSG00000049449.42148.547701145.741400.907006.092004.32910HepG2SUB1
RCN1ENSG00000049449.43675.678401800.478601.0295056.4849054.35210HepG2SUCLG1
RCN1ENSG00000049449.42046.009501390.518300.557102.883401.52730HepG2SUGP2
RCN1ENSG00000049449.42197.833101206.610300.8650011.8796010.63930HepG2SUPV3L1
RCN1ENSG00000049449.43543.77530974.880401.86190107.75740104.89950HepG2TAF15
RCN1ENSG00000049449.42387.556901683.112700.504305.912404.90990HepG2TARDBP
RCN1ENSG00000049449.41556.22280808.791300.9441013.6556011.78380HepG2TFIP11
RCN1ENSG00000049449.4341.44850895.74320-1.3914028.8418026.20150HepG2TIA1
RCN1ENSG00000049449.41569.497401195.789800.392205.824905.06080HepG2TRIM56
RCN1ENSG00000049449.42379.275601566.492300.602909.714407.88830HepG2TUFM
RCN1ENSG00000049449.4730.064701222.66540-0.743908.111607.03770HepG2U2AF1
RCN1ENSG00000049449.42081.497501236.501100.7513022.7914021.16940HepG2UPF1
RCN1ENSG00000049449.4610.966401193.79310-0.9664023.0155021.53640HepG2UTP3
RCN1ENSG00000049449.4664.88030983.85370-0.565302.543701.49930HepG2XPO5
RCN1ENSG00000049449.41992.689901348.260400.563503.907602.64980HepG2XRCC6
RCN1ENSG00000049449.4906.232001187.77340-0.390302.272901.61010HepG2XRN2
RCN1ENSG00000049449.4465.00210967.84980-1.0575026.5757024.88450HepG2ZC3H8
RCN1ENSG00000049449.4579.269501359.91440-1.2312047.1401045.59950HepG2ZNF622
RCN1ENSG00000049449.4130.14160199.97120-0.619702.553101.42470K562AARS
RCN1ENSG00000049449.4315.30700455.95250-0.532104.175503.50340K562AGGF1
RCN1ENSG00000049449.4364.62550474.43340-0.379802.103501.53140K562AKAP8L
RCN1ENSG00000049449.4172.54200254.22650-0.559202.728701.42890K562BCCIP
RCN1ENSG00000049449.4152.80900245.62080-0.684703.236002.19740K562BCLAF1
RCN1ENSG00000049449.4115.64870210.31360-0.862804.337702.24540K562DDX51
RCN1ENSG00000049449.4109.82040201.50740-0.875703.851102.30510K562EEF2
RCN1ENSG00000049449.4111.90370194.67740-0.798803.696202.62850K562EFTUD2
RCN1ENSG00000049449.4832.93130249.973601.7363044.4697042.30520K562EIF2S2
RCN1ENSG00000049449.4162.95720251.37370-0.625303.457202.57290K562EIF3G
RCN1ENSG00000049449.4130.07340222.06160-0.771604.679003.10760K562EIF4B
RCN1ENSG00000049449.4117.68550256.42940-1.123608.829407.82190K562FXR1
RCN1ENSG00000049449.4168.29790253.35740-0.590203.197401.96940K562GLRX3
RCN1ENSG00000049449.4372.47800197.652400.914106.823405.57820K562GPKOW
RCN1ENSG00000049449.4186.91520333.07010-0.833405.623504.54240K562GRSF1
RCN1ENSG00000049449.4370.96830227.883800.702903.515502.29770K562HNRNPA1
RCN1ENSG00000049449.4156.27400218.86000-0.485901.826301.32890K562HNRNPC
RCN1ENSG00000049449.4380.41470252.346300.592104.328703.20080K562HNRNPU
RCN1ENSG00000049449.4914.95150345.274601.4059024.1550022.01950K562HSPD1
RCN1ENSG00000049449.4191.90370294.39040-0.617302.971901.89770K562IGF2BP2
RCN1ENSG00000049449.4134.45990221.92570-0.722903.268601.64730K562LIN28B
RCN1ENSG00000049449.4276.44230412.09030-0.576002.447401.30510K562PABPC1
RCN1ENSG00000049449.4293.51700492.49000-0.746702.217801.35200K562PABPN1
RCN1ENSG00000049449.4183.66170275.10130-0.582902.925601.92060K562PCBP2
RCN1ENSG00000049449.4205.52960300.44250-0.547703.277902.56120K562PTBP1
RCN1ENSG00000049449.4879.99970557.212900.659207.388005.57810K562PUM1
RCN1ENSG00000049449.4268.26960470.54970-0.810706.677005.87550K562PUS1
RCN1ENSG00000049449.4324.21630458.44500-0.499803.586602.92530K562RBM15
RCN1ENSG00000049449.4163.03000287.99600-0.820905.625004.37580K562RBM22
RCN1ENSG00000049449.4171.69760280.81200-0.709704.016202.24740K562RBM34
RCN1ENSG00000049449.4109.73040178.99920-0.706002.874301.86380K562RCC2
RCN1ENSG00000049449.4180.36790303.09140-0.748804.785103.30320K562NELFE
RCN1ENSG00000049449.4198.81930450.55830-1.180304.604402.93030K562SF1
RCN1ENSG00000049449.4108.68960292.05080-1.4260014.3326012.59030K562SF3A3
RCN1ENSG00000049449.4218.83460300.77980-0.458902.466601.66120K562SF3B4
RCN1ENSG00000049449.4382.36520230.826900.728005.113002.78140K562SND1
RCN1ENSG00000049449.4200.21090294.55290-0.557003.040102.30140K562SRSF1
RCN1ENSG00000049449.4422.59580259.293500.704605.904703.90750K562SSB
RCN1ENSG00000049449.4260.70510372.99970-0.516803.425002.00370K562TROVE2
RCN1ENSG00000049449.4289.90790194.108300.578602.730001.71960K562UCHL5
RCN1ENSG00000049449.4421.99040313.805000.427203.030602.27930K562UPF1
RCN1ENSG00000049449.4180.90170279.23350-0.626304.186603.16090K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RCN1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RCN1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RCN1 is not avaliable on ENCORE database.