PPAP2A

General Information

Gene Name       : PPAP2A
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PPAP2A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPAP2A is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPAP2A RNA is bound by 3 proteins.  







eCLIP assay for PPAP2A is not avaliable on ENCORE database.





3 proteins are bound to PPAP2A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr55483055254830664-5'-UTR,intron-Distal4.292478.05960HepG2DDX3X
chr55483070354830799-5'-UTR,intron-Distal,intron-Proximal3.719684.38588HepG2DDX3X
chr55483046154830552-5'-UTR,intron-Distal5.809968.14198HepG2DDX3X
chr55479958254799709-intron-Distal4.466956.20526HepG2DDX59
chr55479959954799740-intron-Distal6.1497415.22093HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPAP2A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPAP2A is not available on ENCORE database.

  • 45 RBPs can affect the levels of PPAP2A.  








The Knockdown/knockout RNA-Seq assay for PPAP2A is not available on ENCORE database.





45 RBPs can affect the gene expression of PPAP2A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPAP2AENSG00000067113.12157.20120112.167900.486901.822401.31030HepG2ACO1
PPAP2AENSG00000067113.12355.06270196.450600.853804.857404.17900HepG2AKAP1
PPAP2AENSG00000067113.12225.85690112.666901.003207.192206.02170HepG2AKAP8L
PPAP2AENSG00000067113.12279.12650162.549200.779904.238403.27530HepG2ASCC1
PPAP2AENSG00000067113.12241.67110124.935100.951806.125405.03370HepG2CALR
PPAP2AENSG00000067113.12226.85680154.432000.554702.231001.53170HepG2CIRBP
PPAP2AENSG00000067113.12182.82860104.137900.811902.833902.05910HepG2CNOT7
PPAP2AENSG00000067113.12216.54730130.010700.736003.540102.83160HepG2CELF1
PPAP2AENSG00000067113.12360.64150188.191000.938306.443205.52930HepG2DDX3X
PPAP2AENSG00000067113.12263.92070161.480300.708602.626901.67650HepG2DDX59
PPAP2AENSG00000067113.12230.77260161.645400.513501.820801.30940HepG2DDX6
PPAP2AENSG00000067113.12166.05620107.305600.629802.556301.90230HepG2DKC1
PPAP2AENSG00000067113.12212.72900132.133100.686902.697901.89280HepG2EIF4G2
PPAP2AENSG00000067113.12178.98210109.578200.707803.139602.25250HepG2EWSR1
PPAP2AENSG00000067113.12289.75350156.239300.891004.648903.67140HepG2FIP1L1
PPAP2AENSG00000067113.12123.8856073.123900.760502.389401.56470HepG2GEMIN5
PPAP2AENSG00000067113.12265.4470096.222201.4639011.4311010.25920HepG2HNRNPA1
PPAP2AENSG00000067113.12245.59160153.849400.674603.135202.47000HepG2HNRNPLL
PPAP2AENSG00000067113.12325.07320163.395900.992307.014905.98770HepG2IGF2BP2
PPAP2AENSG00000067113.12100.48050164.34090-0.709802.338901.42930HepG2KHSRP
PPAP2AENSG00000067113.1298.67290173.32900-0.812803.214702.50800HepG2MAGOH
PPAP2AENSG00000067113.1267.22840138.68590-1.044703.664902.78630HepG2NOL12
PPAP2AENSG00000067113.12208.41290118.643400.812703.038701.76980HepG2PRPF6
PPAP2AENSG00000067113.12140.8165082.748300.766902.225401.49770HepG2PRPF8
PPAP2AENSG00000067113.12214.81400132.368000.698402.931902.32110HepG2PUF60
PPAP2AENSG00000067113.12218.67650140.403100.639102.610101.95780HepG2PUM2
PPAP2AENSG00000067113.12183.61320114.245400.684403.429602.76120HepG2PUS1
PPAP2AENSG00000067113.12245.22660163.967300.580602.777101.91920HepG2RBM15
PPAP2AENSG00000067113.12116.13420196.12010-0.755903.836403.12640HepG2RECQL
PPAP2AENSG00000067113.12233.13770151.694800.619903.281902.54760HepG2RPLP0
PPAP2AENSG00000067113.12134.4248079.913600.750202.547601.95540HepG2RPS19
PPAP2AENSG00000067113.12146.8547081.854200.843202.720701.93890HepG2RRP9
PPAP2AENSG00000067113.12140.5168080.205700.808902.792601.84940HepG2SERBP1
PPAP2AENSG00000067113.12299.21650158.444500.917105.645004.66120HepG2SF3A3
PPAP2AENSG00000067113.12106.71380197.01870-0.884604.872404.12240HepG2SF3B4
PPAP2AENSG00000067113.12168.34430110.424200.608302.010101.44790HepG2SMN1
PPAP2AENSG00000067113.12371.53080169.446101.132606.946905.70200HepG2SNRNP70
PPAP2AENSG00000067113.12193.09470130.666300.563302.147101.58740HepG2SRSF5
PPAP2AENSG00000067113.12119.56040167.29030-0.484601.952401.47340HepG2SRSF9
PPAP2AENSG00000067113.12250.65910148.805800.752205.254604.59170HepG2SSB
PPAP2AENSG00000067113.12238.01560106.793701.156105.790104.86720HepG2SUPV3L1
PPAP2AENSG00000067113.12147.35180103.336500.511801.716501.30270HepG2TIAL1
PPAP2AENSG00000067113.12156.94090104.225000.590402.362401.83290HepG2TRIM56
PPAP2AENSG00000067113.12228.37450133.665700.772703.472202.77350HepG2U2AF1
PPAP2AENSG00000067113.12211.03130140.515900.586603.070102.34260HepG2UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPAP2A is not available on ENCORE database.





2 RBPs can affect the splicing of PPAP2A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPPAP2AENSG00000067113.12chr5-5477112654771278547636965476397754830399548308780.317000.000120.01612includedHepG2PRPF8
SEPPAP2AENSG00000067113.12chr5-5477112654771278547636965476397754830399548308780.291000.000010.00218includedHepG2SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PPAP2A is not avaliable on ENCORE database.