LINC01029

General Information

Gene Name       : LINC01029
Gene ID             : ENSG00000265843.2
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LINC01029)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LINC01029ENSG00000265843.20.000.000.00ENCSR000AEF
HepG2LINC01029ENSG00000265843.20.000.000.00ENCSR985KAT
K562LINC01029ENSG00000265843.2113.69133.10123.39ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LINC01029 is not avaliable on ENCORE database.



Proteins bound to RNA

  • LINC01029 RNA is bound by 35 proteins.  







eCLIP assay for LINC01029 is not avaliable on ENCORE database.





35 proteins are bound to LINC01029 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr187570369575703756-intron-Distal3.726264.25794K562HNRNPK
chr187569704075697048-intron-Distal6.39795400.00000K562AGGF1
chr187569784475697925-intron-Distal3.086899.68054K562SAFB
chr187568854975688641-intron-Distal3.8497211.45182K562SAFB
chr187569321075693318-intron-Distal4.5500010.05966K562HNRNPK
chr187568946675689518-intron-Distal4.7232630.29418K562SAFB2
chr187568997475689996-intron-Distal3.5943115.78344K562SLTM
chr187569691275696916-intron-Distal6.91413400.00000K562AGGF1
chr187568364875683683-intron-Distal,intron-Proximal4.814764.34551K562ZC3H11A
chr187569642075696436-intron-Distal7.40002400.00000K562AGGF1
chr187569658975696627-intron-Distal5.3198278.81273K562HNRNPL
chr187568940175689430-intron-Distal4.1239434.98699K562SLTM
chr187568535675685398-intron-Distal3.157757.15027K562SAFB2
chr187569692875696941-intron-Distal6.75544400.00000K562AGGF1
chr187568409475684102-intron-Distal6.5285756.00196K562YBX3
chr187568747875687544-intron-Distal3.466164.17990K562CPSF6
chr187569701575697024-intron-Distal6.1881962.10872K562HNRNPL
chr187568999475690120-intron-Distal3.9733327.23339K562UCHL5
chr187568705975687105-intron-Distal3.0341710.72120K562SAFB2
chr187568938275689479-intron-Distal3.8583319.89582K562UCHL5
chr187569505775695166-intron-Distal3.971548.72457K562RBM15
chr187569832175698384-intron-Distal3.4883710.22393K562CSTF2T
chr187569530275695369-intron-Distal3.229223.73980K562YWHAG
chr187568410675684130-intron-Distal3.629987.42315K562YBX3
chr187568936475689494-intron-Distal4.9048613.23387K562PPIL4
chr187568355875683575-intron-Distal3.938523.02621K562CPSF6
chr187568941875689492-intron-Distal3.164218.50657K562NIPBL
chr187569589375695924-intron-Distal4.59906400.00000K562AGGF1
chr187568610875686155-intron-Distal3.194549.20160K562MATR3
chr187568716475687215-intron-Distal3.387364.22460K562RBM15
chr187569470475694773-intron-Distal3.6999315.49952K562SAFB2
chr187568912475689191-intron-Distal3.212085.01566K562YWHAG
chr187569704875697059-intron-Distal4.8478143.58976K562HNRNPL
chr187568747975687529-intron-Distal5.2719032.37938K562SLTM
chr187569670275696713-intron-Distal7.4155297.41045K562HNRNPL
chr187569641475696420-intron-Distal7.10762400.00000K562AGGF1
chr187568647875686513-intron-Distal6.58854400.00000K562PTBP1
chr187569636175696469-intron-Distal4.5773872.19230K562GTF2F1
chr187568870775688796-intron-Distal3.6972113.26723K562YWHAG
chr187569705975697106-intron-Distal4.7472949.25754K562HNRNPL
chr187569702075697027-intron-Distal6.63312400.00000K562AGGF1
chr187569629075696353-intron-Distal3.031615.50696K562YBX3
chr187569712975697132-intron-Distal7.04878400.00000K562AGGF1
chr187568885775688908-intron-Distal4.6127321.97494K562SLTM
chr187570421275704347-intron-Distal4.0038615.21244K562HNRNPK
chr187569091675690939-intron-Distal3.3568712.41140K562SAFB2
chr187570370675703795-intron-Distal3.632299.50076K562MATR3
chr187569642075696435-intron-Distal5.0776676.58573K562HNRNPL
chr187569726975697277-intron-Distal6.18341400.00000K562AGGF1
chr187569664975696659-intron-Distal8.30111276.31403K562AGGF1
chr187568899075689035-intron-Distal3.3406215.60305K562SLTM
chr187569443575694461-intron-Distal6.5935157.96634K562AQR
chr187569807375698083-intron-Distal5.6767855.51779K562HNRNPL
chr187568974175689794-intron-Distal3.6369116.89582K562SLTM
chr187569812875698200-intron-Distal4.0126148.09849K562HNRNPL
chr187568410275684106-intron-Distal6.4344152.15886K562YBX3
chr187569128275691315-intron-Distal4.1510413.59666K562SLTM
chr187569739175697462-intron-Distal4.508773.60656K562NOLC1
chr187568925475689300-intron-Distal4.2852117.46458K562SLTM
chr187569526875695301-intron-Distal3.465967.59086K562SAFB2
chr187569610675696141-intron-Distal4.3643422.98393K562HNRNPL
chr187568623375686253-intron-Distal5.31995400.00000K562PTBP1
chr187569668275696722-intron-Distal6.1352768.17566K562GTF2F1
chr187569673875696749-intron-Distal6.96905400.00000K562AGGF1
chr187568933875689401-intron-Distal4.2570140.79670K562SLTM
chr187569735975697366-intron-Distal6.19782400.00000K562AGGF1
chr187569710675697130-intron-Distal5.8736646.68580K562HNRNPL
chr187568745475687474-intron-Distal4.5877113.68660K562SLTM
chr187570230975702406-intron-Distal3.478857.27955K562FUS
chr187569694175696949-intron-Distal6.56748400.00000K562AGGF1
chr187569508575695176-intron-Distal3.0941917.86129K562SLTM
chr187569659275696604-intron-Distal7.42239400.00000K562AGGF1
chr187569785875697885-intron-Distal4.8727584.50279K562AGGF1
chr187568943075689457-intron-Distal4.4264837.51046K562SLTM
chr187569699775697008-intron-Distal6.17187400.00000K562AGGF1
chr187569671575696762-intron-Distal7.17895400.00000K562HNRNPL
chr187569692875696946-intron-Distal5.3169050.09899K562HNRNPL
chr187568861075688637-intron-Distal3.6782412.13788K562SAFB2
chr187569736475697391-intron-Distal5.000878.23578K562SAFB2
chr187570116575701201-intron-Distal3.053195.34636K562KHDRBS1
chr187568995575689979-intron-Distal3.840193.13793K562SAFB
chr187569802775698127-intron-Distal4.3991147.76940K562GTF2F1
chr187569714075697149-intron-Distal7.00979400.00000K562AGGF1
chr187569957775699630-intron-Distal3.591063.58549K562NONO
chr187569692175696928-intron-Distal6.82713400.00000K562AGGF1
chr187570350975703624-intron-Distal4.173689.22655K562HNRNPK
chr187568637075686402-intron-Distal7.36899400.00000K562PTBP1
chr187569858675698621-intron-Distal,intron-Proximal3.541957.11119K562KHSRP
chr187570543475705485-intron-Distal3.144354.63722K562MATR3
chr187569022775690290-intron-Distal3.9310010.12651K562YWHAG
chr187568912575689191-intron-Distal4.5682843.06204K562SLTM
chr187568801875688043-intron-Distal4.601754.95501K562YWHAG
chr187570437175704450-intron-Distal4.5862213.98241K562MATR3
chr187569703575697040-intron-Distal6.44189400.00000K562AGGF1
chr187569672975696738-intron-Distal7.37049400.00000K562AGGF1
chr187569714975697171-intron-Distal6.20574400.00000K562HNRNPL
chr187569663275696638-intron-Distal7.33576400.00000K562AGGF1
chr187569037575690427-intron-Distal4.1049714.56073K562SAFB2
chr187569785775697887-intron-Distal4.2620722.15204K562HNRNPL
chr187569806475698119-intron-Distal6.80275400.00000K562AGGF1
chr187569682675696837-intron-Distal6.08170400.00000K562AGGF1
chr187568996375689975-intron-Distal3.411707.37025K562SAFB2
chr187568727075687312-intron-Distal3.8732317.16580K562SLTM
chr187569689875696912-intron-Distal7.02254400.00000K562AGGF1
chr187569720075697228-intron-Distal6.16763400.00000K562AGGF1
chr187569680975696848-intron-Distal4.5294245.38815K562HNRNPL
chr187569717175697198-intron-Distal6.32111400.00000K562HNRNPL
chr187569810975698181-intron-Distal3.606225.29044K562CSTF2T
chr187568938675689491-intron-Distal3.0954010.60227K562XRCC6
chr187569724475697249-intron-Distal6.03253400.00000K562AGGF1
chr187569704175697048-intron-Distal5.3177449.85044K562HNRNPL
chr187568609775686154-intron-Distal6.01402400.00000K562PTBP1
chr187568838775688461-intron-Distal3.053855.42409K562SAFB
chr187569589275695929-intron-Distal3.4044723.30009K562HNRNPL
chr187568737575687418-intron-Distal5.1146123.53744K562SLTM
chr187569694675696966-intron-Distal4.9710340.25856K562HNRNPL
chr187568641675686428-intron-Distal6.5713166.70147K562PTBP1
chr187569656475696626-intron-Distal3.185394.98509K562YBX3
chr187569662775696659-intron-Distal6.88109109.52386K562HNRNPL
chr187569691675696921-intron-Distal6.91952400.00000K562AGGF1
chr187568816475688219-intron-Distal3.223039.62698K562UCHL5
chr187568753975687579-intron-Distal4.1637115.79844K562SLTM
chr187569694775697107-intron-Distal5.6927657.37347K562GTF2F1
chr187568753075687587-intron-Distal3.026628.61748K562SAFB2
chr187569667675696685-intron-Distal10.70266400.00000K562AGGF1
chr187568608875686209-intron-Distal3.9984830.80319K562QKI
chr187568971175689766-intron-Distal4.883038.80978K562YWHAG
chr187569122875691262-intron-Distal4.973866.37193K562YWHAG
chr187569665975696687-intron-Distal8.80579144.76560K562HNRNPL
chr187569644575696466-intron-Distal7.14534400.00000K562AGGF1
chr187570349875703534-intron-Distal4.202064.60047K562SAFB
chr187568516375685221-intron-Distal4.3515113.57527K562PUM2
chr187569686575696881-intron-Distal7.31202400.00000K562AGGF1
chr187569803275698062-intron-Distal3.8695826.35328K562HNRNPL
chr187568851775688589-intron-Distal3.3255725.04004K562SAFB2
chr187569737275697401-intron-Distal6.0099139.47705K562HNRNPL
chr187569443175694435-intron-Distal6.9283249.53436K562AQR
chr187569679875696803-intron-Distal6.73109400.00000K562AGGF1
chr187569713075697139-intron-Distal6.4419262.97914K562HNRNPL
chr187568615975686170-intron-Distal7.0257048.99240K562PTBP1
chr187568561475685703-intron-Distal3.675154.14719K562IGF2BP2
chr187569637375696393-intron-Distal5.4313560.76624K562HNRNPL
chr187568684375686898-intron-Distal3.4926614.97551K562SLTM
chr187568625475686313-intron-Distal3.5860015.18469K562MATR3
chr187569686175696947-intron-Distal5.7031748.98544K562GTF2F1
chr187569722575697260-intron-Distal4.8563282.98155K562HNRNPL
chr187568935375689466-intron-Distal4.1633256.77242K562SAFB2
chr187569728575697304-intron-Distal4.2140436.74560K562HNRNPL
chr187569680675696852-intron-Distal4.6010331.39631K562GTF2F1
chr187569529075695353-intron-Distal3.0668210.87054K562UCHL5
chr187569144675691479-intron-Distal,intron-Proximal3.3712312.00190K562SLTM
chr187568336475683377-intron-Distal,intron-Proximal4.751994.02664K562ZC3H11A
chr187569631675696373-intron-Distal4.8192066.81761K562HNRNPL
chr187569670175696714-intron-Distal8.34878400.00000K562AGGF1
chr187569675175696754-intron-Distal6.90628400.00000K562AGGF1
chr187569777475697807-intron-Distal4.2111621.53059K562HNRNPL
chr187569089575690946-intron-Distal3.6407716.91600K562SLTM
chr187569657275696589-intron-Distal4.5436847.13671K562HNRNPL
chr187569714175697205-intron-Distal3.9131013.60526K562YBX3
chr187570424075704322-intron-Distal3.527736.58022K562MATR3
chr187569686375696973-intron-Distal4.8464613.60343K562YBX3
chr187568414575684194-intron-Distal3.050958.43717K562SAFB2
chr187569720575697232-intron-Distal5.1517610.65029K562YBX3
chr187568855975688635-intron-Distal3.9364512.09208K562YWHAG
chr187569665975696671-intron-Distal8.55529293.77877K562AGGF1
chr187569711475697129-intron-Distal6.78934400.00000K562AGGF1
chr187569571975695733-intron-Distal4.1577510.00729K562SAFB2
chr187568620075686220-intron-Distal5.74284400.00000K562PTBP1
chr187569697875696988-intron-Distal5.6003138.84631K562HNRNPL
chr187568402475684041-intron-Distal5.215728.45761K562YBX3
chr187569686575696885-intron-Distal6.6037371.49594K562HNRNPL
chr187569713275697136-intron-Distal7.17333400.00000K562AGGF1
chr187569808375698113-intron-Distal5.9613470.01127K562HNRNPL
chr187569862175698649-intron-Distal,intron-Proximal3.793108.45565K562KHSRP
chr187569154875691633-intron-Distal,intron-Proximal4.1380935.51121K562AQR
chr187568822175688295-intron-Distal3.4627420.95892K562SAFB2
chr187569742475697456-intron-Distal5.9455987.19280K562AGGF1
chr187569699675697035-intron-Distal4.067758.72318K562YBX3
chr187569656175696572-intron-Distal4.0204824.38956K562HNRNPL
chr187569705275697056-intron-Distal6.69024400.00000K562AGGF1
chr187568661075686632-intron-Distal3.558025.06703K562YWHAG
chr187569960475699674-intron-Distal3.0441212.04636K562SAFB2
chr187569688175696888-intron-Distal7.03051400.00000K562AGGF1
chr187568824575688284-intron-Distal3.448745.37099K562SAFB
chr187569812775698220-intron-Distal3.5888226.49830K562GTF2F1
chr187569976175699809-intron-Distal3.106535.01221K562SAFB2
chr187569639375696414-intron-Distal5.2741474.59218K562HNRNPL
chr187568627575686315-intron-Distal5.49614400.00000K562PTBP1
chr187569717875697203-intron-Distal5.1829249.39141K562GTF2F1
chr187569678875696809-intron-Distal5.4119555.16193K562HNRNPL
chr187569824675698258-intron-Distal3.825497.22414K562KHDRBS1
chr187569646675696474-intron-Distal6.2258855.55006K562AGGF1
chr187568937275689493-intron-Distal3.538658.60649K562SAFB
chr187569685075696865-intron-Distal6.52044400.00000K562AGGF1
chr187569675875696762-intron-Distal6.65410400.00000K562AGGF1
chr187568404675684051-intron-Distal4.127228.08045K562YBX3
chr187569098475691047-intron-Distal3.6070515.42644K562SAFB2
chr187568622075686233-intron-Distal5.39208400.00000K562PTBP1
chr187569019875690319-intron-Distal4.5209543.82892K562SAFB2
chr187569626075696362-intron-Distal3.4160921.03755K562SLTM
chr187568762975687654-intron-Distal3.836774.70608K562YWHAG
chr187569711275697148-intron-Distal3.6742235.72607K562AKAP8L
chr187569796275697989-intron-Distal3.893185.73361K562YBX3
chr187569734575697359-intron-Distal6.50695400.00000K562AGGF1
chr187568873775688784-intron-Distal3.404224.76003K562PPIL4
chr187569382575693888-intron-Distal3.516463.84723K562ILF3
chr187569732875697341-intron-Distal3.8423619.79983K562HNRNPL
chr187569663875696649-intron-Distal7.81554400.00000K562AGGF1
chr187569702475697041-intron-Distal5.5761565.84433K562HNRNPL
chr187568941475689466-intron-Distal3.8533611.88074K562YWHAG
chr187568450075684530-intron-Distal4.204868.40926K562SAFB2
chr187569742075697453-intron-Distal3.327426.97105K562SAFB2
chr187569700675697015-intron-Distal5.9214751.78627K562HNRNPL
chr187569004375690114-intron-Distal3.746608.55009K562PPIL4
chr187568631575686369-intron-Distal6.74799400.00000K562PTBP1
chr187569677575696788-intron-Distal6.0891968.11763K562HNRNPL
chr187569668775696702-intron-Distal7.57986109.92967K562HNRNPL
chr187569680975696826-intron-Distal6.16888400.00000K562AGGF1
chr187569680275696863-intron-Distal4.7987615.90034K562YBX3
chr187569802175698042-intron-Distal5.70001400.00000K562AGGF1
chr187569088675690916-intron-Distal3.1587710.25177K562SAFB2
chr187569372075693798-intron-Distal3.494457.58878K562ILF3
chr187569019875690318-intron-Distal5.1194128.72547K562UCHL5
chr187569005475690154-intron-Distal4.3850863.45316K562SLTM
chr187569005575690080-intron-Distal4.6840027.35584K562SAFB2
chr187569037575690432-intron-Distal3.4064212.68225K562SLTM
chr187569093975690978-intron-Distal3.4211311.08176K562SAFB2
chr187570522575705311-intron-Distal3.4187011.66902K562MATR3
chr187569016475690196-intron-Distal5.0787419.62007K562SAFB2
chr187569636975696414-intron-Distal6.96801400.00000K562AGGF1
chr187569710775697178-intron-Distal5.4241175.64153K562GTF2F1
chr187568858975688610-intron-Distal4.1956523.55510K562SAFB2
chr187568365075683683-intron-Distal,intron-Proximal3.409704.51419K562FUS
chr187569525475695307-intron-Distal4.2704117.77898K562SLTM
chr187568536775685405-intron-Distal4.361265.71236K562FUS
chr187568994675689974-intron-Distal4.3399716.05105K562SLTM
chr187569705975697073-intron-Distal6.34081400.00000K562AGGF1
chr187569676675696775-intron-Distal6.4264875.61493K562HNRNPL
chr187569446875694476-intron-Distal6.9747151.17916K562AQR
chr187568625375686275-intron-Distal5.62224400.00000K562PTBP1
chr187569680475696809-intron-Distal6.30848400.00000K562AGGF1
chr187569630375696366-intron-Distal6.84558400.00000K562AGGF1
chr187568511575685208-intron-Distal3.446824.05532K562CPSF6
chr187569727775697283-intron-Distal6.05940400.00000K562AGGF1
chr187568945775689501-intron-Distal5.1530738.63352K562SLTM
chr187568404075684076-intron-Distal3.449718.34537K562SLTM
chr187569052275690579-intron-Distal3.225916.75486K562UCHL5
chr187569700975697020-intron-Distal6.38421400.00000K562AGGF1
chr187568999675690054-intron-Distal4.4003447.08822K562SLTM
chr187568511075685165-intron-Distal3.745389.01468K562KHSRP
chr187568907575689091-intron-Distal4.0509911.38205K562SLTM
chr187569666175696725-intron-Distal4.8099322.19203K562YBX3
chr187569686075696933-intron-Distal3.0551316.03442K562AKAP8L
chr187568965575689708-intron-Distal4.1814619.08498K562SLTM
chr187568468075684747-intron-Distal3.086287.87079K562SAFB2
chr187568999975690055-intron-Distal4.3891326.58368K562SAFB2
chr187569132775691384-intron-Distal,intron-Proximal3.837507.75215K562YWHAG
chr187569042875690491-intron-Distal3.6508613.05803K562UCHL5
chr187569512975695177-intron-Distal4.062305.51111K562YWHAG
chr187569655075696592-intron-Distal7.09670400.00000K562AGGF1
chr187569688875696893-intron-Distal6.97085400.00000K562AGGF1
chr187569698175696997-intron-Distal6.16023400.00000K562AGGF1
chr187569736675697404-intron-Distal7.52234400.00000K562AGGF1
chr187569416875694239-intron-Distal3.135383.63710K562HNRNPK
chr187568429775684361-intron-Distal3.046909.14495K562SLTM
chr187569005375690110-intron-Distal4.333127.42912K562YWHAG
chr187569003275690134-intron-Distal3.102197.53612K562GTF2F1
chr187569000575690052-intron-Distal3.6671615.61762K562NIPBL
chr187569660475696619-intron-Distal6.89667400.00000K562AGGF1
chr187569643575696476-intron-Distal4.9525187.41796K562HNRNPL
chr187569688575696895-intron-Distal7.0094598.77080K562HNRNPL
chr187569672375696806-intron-Distal6.04315400.00000K562GTF2F1
chr187569705675697059-intron-Distal6.21334400.00000K562AGGF1
chr187568691575686970-intron-Distal3.4664614.01530K562SAFB2
chr187569818775698228-intron-Distal3.193718.80922K562SAFB2
chr187569846375698531-intron-Distal4.2440630.46843K562PABPC4
chr187568631675686423-intron-Distal4.6378857.61363K562MATR3
chr187569666275696682-intron-Distal5.6062938.63902K562GTF2F1
chr187569689375696898-intron-Distal7.26194400.00000K562AGGF1
chr187569002475690104-intron-Distal3.941847.97866K562FUS
chr187569612275696154-intron-Distal3.139433.11089K562PPIL4
chr187569662675696661-intron-Distal3.616419.26008K562YBX3
chr187569466775694721-intron-Distal3.237637.41391K562RBM15
chr187568510175685159-intron-Distal3.163805.25539K562PABPC4
chr187569670275696817-intron-Distal3.1794743.02827K562AKAP8L
chr187569711075697114-intron-Distal6.61522400.00000K562AGGF1
chr187568642375686523-intron-Distal4.5853159.90149K562MATR3
chr187569667175696676-intron-Distal9.37492264.82405K562AGGF1
chr187569724975697258-intron-Distal5.67882400.00000K562AGGF1
chr187569728375697305-intron-Distal6.30205400.00000K562AGGF1
chr187569694975696965-intron-Distal6.44666400.00000K562AGGF1
chr187569684475696850-intron-Distal6.29954400.00000K562AGGF1
chr187569683775696844-intron-Distal6.14880400.00000K562AGGF1
chr187569679275696797-intron-Distal6.52916400.00000K562AGGF1
chr187568690175686964-intron-Distal3.6154622.90900K562SLTM
chr187569715075697200-intron-Distal6.73421400.00000K562AGGF1
chr187568946675689514-intron-Distal3.130976.61606K562YWHAG
chr187569530275695359-intron-Distal4.3881615.00498K562SAFB2
chr187569707375697090-intron-Distal6.33488400.00000K562AGGF1
chr187568913075689179-intron-Distal3.192629.59640K562SAFB2
chr187569811975698181-intron-Distal5.77917400.00000K562AGGF1
chr187569676275696788-intron-Distal6.62947400.00000K562AGGF1
chr187568745575687477-intron-Distal3.460067.59221K562SAFB2
chr187570549475705560-intron-Distal7.0031033.87775K562TIA1
chr187569702775697035-intron-Distal6.43640400.00000K562AGGF1
chr187569020075690302-intron-Distal4.8952045.62177K562SLTM
chr187569726075697285-intron-Distal4.7070462.70890K562HNRNPL
chr187569962975699711-intron-Distal3.510533.11089K562PPIL4
chr187569522375695265-intron-Distal3.016906.29223K562UCHL5
chr187569051975690574-intron-Distal3.3291313.53009K562SLTM
chr187569099775691036-intron-Distal3.117939.73895K562SLTM
chr187569726075697282-intron-Distal3.555428.50021K562YBX3
chr187568821175688279-intron-Distal3.1922222.75582K562SLTM
chr187569626875696356-intron-Distal4.0174738.66839K562GTF2F1
chr187569530775695346-intron-Distal4.9062312.76990K562SLTM
chr187568801575688042-intron-Distal3.834003.33309K562SAFB
chr187569573375695783-intron-Distal3.117868.90319K562SAFB2
chr187569684875696865-intron-Distal4.2980424.62884K562HNRNPL
chr187568952075689558-intron-Distal3.064963.50312K562YWHAG
chr187568446275684510-intron-Distal3.358993.21497K562NOLC1
chr187568511775685163-intron-Distal5.4171317.98612K562PUM2
chr187569698875696996-intron-Distal5.5726737.72614K562HNRNPL
chr187568534575685404-intron-Distal3.028197.19906K562ZC3H11A
chr187569611175696126-intron-Distal3.438608.13669K562GTF2F1
chr187568835175688444-intron-Distal3.3165612.40150K562SAFB2
chr187569722275697306-intron-Distal4.4042442.19537K562GTF2F1
chr187569669075696701-intron-Distal8.75220400.00000K562AGGF1
chr187569699675697006-intron-Distal5.6716752.24592K562HNRNPL
chr187568919775689254-intron-Distal4.4175922.43659K562SLTM
chr187568867875688724-intron-Distal3.469529.83902K562SAFB2
chr187570419775704343-intron-Distal3.6057339.18150K562HNRNPL
chr187569742275697462-intron-Distal4.5978922.04569K562HNRNPL
chr187569710475697110-intron-Distal6.22801400.00000K562AGGF1
chr187570410275704197-intron-Distal3.7432019.92343K562HNRNPL
chr187568406875684077-intron-Distal6.3465478.89853K562YBX3
chr187570223675702297-intron-Distal4.155094.38053K562SRSF7
chr187569522275695247-intron-Distal3.213965.74046K562SAFB2
chr187569627375696316-intron-Distal5.7413554.77145K562HNRNPL
chr187568642875686478-intron-Distal6.22561400.00000K562PTBP1
chr187569730575697327-intron-Distal6.37979400.00000K562AGGF1
chr187570057475700619-intron-Distal3.923403.34601K562HNRNPK
chr187569818675698243-intron-Distal4.144343.96304K562CSTF2T
chr187569008475690164-intron-Distal5.2100441.00324K562SAFB2
chr187569696675696978-intron-Distal5.2708635.58231K562HNRNPL
chr187569440175694431-intron-Distal4.623638.01338K562AQR
chr187569655975696615-intron-Distal4.4996633.16916K562GTF2F1
chr187570531175705427-intron-Distal5.2024215.02271K562MATR3
chr187569725875697264-intron-Distal5.86554400.00000K562AGGF1
chr187569103175691055-intron-Distal4.170125.66960K562NIPBL
chr187569536875695429-intron-Distal3.2641514.76163K562SLTM
chr187569671475696729-intron-Distal7.77958400.00000K562AGGF1
chr187569523275695261-intron-Distal4.338135.20612K562SAFB
chr187569668575696690-intron-Distal9.61788400.00000K562AGGF1
chr187568747775687528-intron-Distal3.1953110.72052K562SAFB2
chr187568634475686394-intron-Distal3.859443.19904K562TIA1
chr187569696575696969-intron-Distal6.06884400.00000K562AGGF1
chr187568824275688296-intron-Distal3.626776.69689K562YWHAG
chr187569153975691605-intron-Distal,intron-Proximal3.233513.28108K562U2AF2
chr187569641475696420-intron-Distal4.8497257.44044K562HNRNPL
chr187569696975696981-intron-Distal6.20956400.00000K562AGGF1
chr187569674975696751-intron-Distal6.78213400.00000K562AGGF1
chr187568616675686254-intron-Distal3.8275323.51285K562MATR3
chr187568885575688928-intron-Distal3.9881417.97383K562SAFB2
chr187568405175684068-intron-Distal6.3162476.84576K562YBX3
chr187569826075698290-intron-Distal3.593284.48632K562KHDRBS1
chr187569720375697219-intron-Distal5.3875469.65969K562HNRNPL
chr187568937075689414-intron-Distal3.745338.01290K562YWHAG
chr187569661575696662-intron-Distal5.3156543.80682K562GTF2F1
chr187570439275704425-intron-Distal3.502236.87839K562HNRNPL
chr187569661975696632-intron-Distal7.76572163.71127K562AGGF1
chr187569023375690289-intron-Distal3.881686.37184K562RBM15
chr187569704875697052-intron-Distal6.50778400.00000K562AGGF1
chr187569547575695515-intron-Distal3.657675.32489K562YWHAG
chr187569678875696792-intron-Distal6.58072400.00000K562AGGF1
chr187569466175694704-intron-Distal3.028306.65033K562SAFB2
chr187569033575690363-intron-Distal4.482369.30180K562UCHL5
chr187569709275697097-intron-Distal6.29261400.00000K562AGGF1
chr187568536575685407-intron-Distal4.180474.51210K562NOLC1
chr187569723275697260-intron-Distal3.7554410.40629K562YBX3
chr187568617075686200-intron-Distal6.48767400.00000K562PTBP1
chr187569643675696445-intron-Distal7.03539400.00000K562AGGF1
chr187569713675697140-intron-Distal7.15850400.00000K562AGGF1
chr187569804275698064-intron-Distal5.76551400.00000K562AGGF1
chr187569135175691398-intron-Distal,intron-Proximal4.0288719.38116K562SLTM
chr187568997075690043-intron-Distal3.502645.62027K562PPIL4
chr187568640275686416-intron-Distal6.57746400.00000K562PTBP1
chr187569672575696802-intron-Distal4.6033221.94366K562YBX3
chr187568407775684094-intron-Distal6.9795980.69490K562YBX3
chr187569042775690481-intron-Distal3.5845014.48332K562SAFB2
chr187568950175689561-intron-Distal4.7585231.58130K562SLTM
chr187570442575704467-intron-Distal3.099797.69609K562HNRNPL
chr187569211675692244-intron-Distal3.727653.59301K562HNRNPM
chr187569709775697104-intron-Distal6.07663400.00000K562AGGF1
chr187569689575696928-intron-Distal6.36529400.00000K562HNRNPL
chr187569675475696758-intron-Distal6.79807400.00000K562AGGF1
chr187569713975697148-intron-Distal6.22877400.00000K562HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LINC01029 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LINC01029 is not available on ENCORE database.

  • 59 RBPs can affect the levels of LINC01029.  








The Knockdown/knockout RNA-Seq assay for LINC01029 is not available on ENCORE database.





59 RBPs can affect the gene expression of LINC01029 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LINC01029ENSG00000265843.21421.985402316.62030-0.7041015.7034014.46540K562AGGF1
LINC01029ENSG00000265843.21849.711002545.39400-0.460605.567304.05340K562AKAP8
LINC01029ENSG00000265843.21622.672902410.49400-0.571007.986206.82110K562AKAP8L
LINC01029ENSG00000265843.22196.189502966.11830-0.433603.629602.97540K562AQR
LINC01029ENSG00000265843.21437.669702128.99940-0.5664011.174408.50670K562BCCIP
LINC01029ENSG00000265843.21374.720802154.96660-0.648502.497201.67080K562BOP1
LINC01029ENSG00000265843.22266.058703009.13510-0.409203.503501.86920K562BUD13
LINC01029ENSG00000265843.21084.699102291.07080-1.078705.383304.29810K562CPSF6
LINC01029ENSG00000265843.21836.479901286.077800.513904.015001.77500K562YBX3
LINC01029ENSG00000265843.25691.362804885.406600.220202.659801.70350K562CELF1
LINC01029ENSG00000265843.21365.780501803.97660-0.401506.175304.19950K562DDX27
LINC01029ENSG00000265843.2803.107701256.46850-0.645703.026701.93540K562DDX3X
LINC01029ENSG00000265843.23137.557603987.45960-0.345803.301402.60010K562DDX47
LINC01029ENSG00000265843.23061.980802594.206000.239102.270401.48780K562DKC1
LINC01029ENSG00000265843.2991.466501708.83690-0.7854010.926909.00060K562EFTUD2
LINC01029ENSG00000265843.21088.118603004.30310-1.4652045.6168043.42050K562EIF2S2
LINC01029ENSG00000265843.22004.734601312.574200.610905.038603.92930K562EIF4A3
LINC01029ENSG00000265843.22331.153503105.36690-0.413704.501203.39980K562FIP1L1
LINC01029ENSG00000265843.21316.384502331.64650-0.824803.799302.79230K562FMR1
LINC01029ENSG00000265843.21339.383701976.51360-0.561402.255401.43470K562FTO
LINC01029ENSG00000265843.21749.532301365.000500.358001.829901.31780K562FXR1
LINC01029ENSG00000265843.23314.254304003.80410-0.272702.213501.53330K562GRSF1
LINC01029ENSG00000265843.22659.188102123.682200.324303.348902.16470K562HNRNPA1
LINC01029ENSG00000265843.2795.172001361.33330-0.775709.387707.06440K562HNRNPK
LINC01029ENSG00000265843.21841.108602351.79040-0.353204.624903.46490K562HNRNPU
LINC01029ENSG00000265843.22252.536804210.36670-0.9024018.5652016.64580K562HSPD1
LINC01029ENSG00000265843.21031.183601386.69210-0.427304.019802.52490K562IGF2BP3
LINC01029ENSG00000265843.22036.638302558.32760-0.329003.828402.83570K562KIF1C
LINC01029ENSG00000265843.21608.928902189.46140-0.444503.530001.81990K562LIN28B
LINC01029ENSG00000265843.21724.203801432.593700.267202.079401.34540K562MAGOH
LINC01029ENSG00000265843.21900.219602448.79410-0.365903.911802.56160K562MAK16
LINC01029ENSG00000265843.21734.099001429.631700.278402.296001.46220K562MATR3
LINC01029ENSG00000265843.22105.830802865.94650-0.444604.918403.63700K562MBNL1
LINC01029ENSG00000265843.2735.399501310.85530-0.833904.295602.74870K562NCBP2
LINC01029ENSG00000265843.2934.468401274.58670-0.447804.172702.96640K562PCBP2
LINC01029ENSG00000265843.21411.612202773.17810-0.9742015.9238013.97960K562PCBP3
LINC01029ENSG00000265843.21009.817402127.10460-1.0748027.3354025.04360K562POLR2G
LINC01029ENSG00000265843.22656.256003525.05300-0.408304.260103.21170K562PPIG
LINC01029ENSG00000265843.2969.755101662.89670-0.7780010.563709.09050K562PRPF8
LINC01029ENSG00000265843.21551.367201934.65740-0.318502.687701.79950K562PSIP1
LINC01029ENSG00000265843.21890.132802329.28630-0.301402.101001.57110K562RBM15
LINC01029ENSG00000265843.24670.035403796.389200.298703.273301.52020K562RBM17
LINC01029ENSG00000265843.21378.899202292.13250-0.733203.303201.59130K562RBM39
LINC01029ENSG00000265843.2620.352801404.34020-1.1787021.0715018.26290K562NELFE
LINC01029ENSG00000265843.2847.500901693.80060-0.9990013.6686011.82920K562RPS19
LINC01029ENSG00000265843.2885.597401703.92680-0.944104.282902.69290K562SF1
LINC01029ENSG00000265843.2977.460201207.04900-0.304402.608801.78090K562SF3B4
LINC01029ENSG00000265843.21695.869601296.829100.386903.362701.95690K562SLBP
LINC01029ENSG00000265843.2751.708201364.54950-0.8602014.8372013.19590K562SRSF1
LINC01029ENSG00000265843.22426.374102860.25540-0.237302.767701.60280K562SRSF7
LINC01029ENSG00000265843.21200.791001609.95960-0.423003.148302.06310K562SUPV3L1
LINC01029ENSG00000265843.21504.610801860.72690-0.306502.117901.31030K562TIAL1
LINC01029ENSG00000265843.21041.825601307.37740-0.327602.333601.34730K562TRA2A
LINC01029ENSG00000265843.23165.165603922.60380-0.309505.500903.69270K562TROVE2
LINC01029ENSG00000265843.25803.265904888.123000.247502.863501.43470K562UBE2L3
LINC01029ENSG00000265843.21316.467101703.98590-0.372202.894101.84750K562UCHL5
LINC01029ENSG00000265843.21863.464002529.53290-0.440903.422702.08240K562UTP3
LINC01029ENSG00000265843.22819.417003513.58990-0.317502.595901.35110K562WRN
LINC01029ENSG00000265843.21222.217701992.51440-0.705103.229101.30930K562XPO5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LINC01029 is not available on ENCORE database.





11 RBPs can affect the splicing of LINC01029 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELINC01029ENSG00000265843.2chr18-756987567569895375698512756985677570177475701870-0.311000.005800.08507excludedK562SRSF1
SELINC01029ENSG00000265843.2chr18-7570204875702130756834597568446975705590757056540.159000.002300.04438includedK562U2AF1
SELINC01029ENSG00000265843.2chr18-7569886875698953756944757569466975701774757018700.103000.000000.00024includedK562HNRNPUL1
SELINC01029ENSG00000265843.2chr18-7570204875702130756834597568446975705590757056540.167000.003870.05904includedK562U2AF2
SELINC01029ENSG00000265843.2chr18-7569875675698953756985127569856775701774757018700.070000.006070.08085includedK562HNRNPC
A3SSLINC01029ENSG00000265843.2chr18-7570170475701906757017047570187075702048757021300.181000.000120.02772longerK562RBM22
A3SSLINC01029ENSG00000265843.2chr18-757017047570190675701704757018707570204875702130-0.056000.000880.00617shorterK562AQR
A5SSLINC01029ENSG00000265843.2chr18-757017047570187075701774757018707569886875698953-0.052000.000260.02507shorterK562HNRNPC
A5SSLINC01029ENSG00000265843.2chr18-7570170475701870757017747570187075698829756989530.103000.001400.07040longerK562U2AF2
MXELINC01029ENSG00000265843.2chr18-75694475756946697570170475701870756914507569158575702048757021300.286000.000000.000001includedK562CPSF6
MXELINC01029ENSG00000265843.2chr18-7569851275698567756987107569895375694475756946697570177475701870-0.060000.002750.058662includedK562PPIL4
MXELINC01029ENSG00000265843.2chr18-75694475756946697570170475701870756914507569158575702048757021300.182000.000280.064391includedK562FTO
MXELINC01029ENSG00000265843.2chr18-75694475756946697570170475701870756914507569158575702048757021300.184000.000000.000001includedK562AKAP8L
MXELINC01029ENSG00000265843.2chr18-75697521756976217569886875698953756944757569466975701704757018700.115000.000430.013841includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LINC01029 is not avaliable on ENCORE database.