LINC00534

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LINC00534	ENSG00000253394.5	0.00	0.00	0.00	ENCSR000AEF
HepG2	LINC00534	ENSG00000253394.5	0.00	0.00	0.00	ENCSR985KAT
K562	LINC00534	ENSG00000253394.5	27.82	33.27	30.55	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LINC00534 is not avaliable on ENCORE database.

Proteins bound to RNA

LINC00534 RNA is bound by 26 proteins.

eCLIP assay for LINC00534 is not avaliable on ENCORE database.

26 proteins are bound to LINC00534 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	91268371	91268417	+	intron-Distal	3.73795	5.03277	K562	LARP4
chr8	91493630	91493785	+	intron-Distal	4.99508	17.28254	K562	SAFB2
chr8	91269620	91269642	+	intron-Distal	3.64874	3.03056	K562	PPIL4
chr8	91274974	91274993	+	intron-Distal	3.37198	3.73364	K562	SAFB2
chr8	91304540	91304594	+	intron-Distal	4.71454	6.01663	K562	MATR3
chr8	91264062	91264079	+	intron-Distal	3.60397	5.25672	K562	KHDRBS1
chr8	91283261	91283299	+	intron-Distal	3.75116	3.05019	K562	PPIL4
chr8	91273538	91273584	+	intron-Distal	3.72954	3.69481	K562	UCHL5
chr8	91304611	91304666	+	intron-Distal	4.71454	6.01663	K562	MATR3
chr8	91276879	91276928	+	intron-Distal	4.12391	3.10243	K562	SLTM
chr8	91269794	91269869	+	intron-Distal	4.30945	11.14926	K562	SAFB2
chr8	91363131	91363168	+	intron-Distal	4.79676	3.18981	K562	PTBP1
chr8	91325355	91325470	+	intron-Distal	3.39307	8.99493	K562	SAFB2
chr8	91326443	91326530	+	intron-Distal	3.17220	4.27527	K562	KHDRBS1
chr8	91273520	91273603	+	intron-Distal	3.80611	4.51589	K562	LARP4
chr8	91310194	91310273	+	intron-Distal	4.95891	8.00756	K562	HNRNPK
chr8	91340651	91340730	+	intron-Distal	4.37270	4.95197	K562	SAFB2
chr8	91270011	91270037	+	intron-Distal	4.53993	4.97094	K562	SAFB2
chr8	91270984	91271023	+	intron-Distal	3.54559	4.34612	K562	SAFB2
chr8	91269572	91269646	+	intron-Distal	4.71554	10.61007	K562	LARP4
chr8	91524711	91524806	+	intron-Distal	3.94870	3.10466	K562	SAFB2
chr8	91574990	91575106	+	intron-Distal	5.39496	16.06251	K562	PTBP1
chr8	91384125	91384189	+	intron-Distal	3.01071	5.10412	K562	KHDRBS1
chr8	91265941	91265985	+	intron-Distal	4.38415	5.48602	K562	PPIL4
chr8	91527806	91527911	+	intron-Distal	3.86035	3.26999	K562	KHSRP
chr8	91276441	91276491	+	intron-Distal	3.97137	8.01942	K562	SAFB2
chr8	91269034	91269093	+	intron-Distal	3.85312	8.94059	K562	SAFB2
chr8	91308186	91308275	+	intron-Distal	3.01047	6.28685	K562	KHDRBS1
chr8	91384336	91384419	+	intron-Distal	4.64458	5.86954	K562	UCHL5
chr8	91504988	91505101	+	intron-Distal	3.92580	3.50894	K562	SAFB2
chr8	91376098	91376160	+	intron-Distal	3.25084	3.68431	K562	TARDBP
chr8	91297783	91297859	+	intron-Distal	3.07860	5.67364	K562	ILF3
chr8	91273100	91273170	+	intron-Distal	3.93734	7.40562	K562	SAFB2
chr8	91273992	91274051	+	intron-Distal	4.92420	7.46541	K562	KHDRBS1
chr8	91484719	91484854	+	intron-Distal	3.40302	6.48437	K562	MATR3
chr8	91385697	91385749	+	intron-Distal	3.63796	5.76048	K562	SAFB2
chr8	91262887	91262947	+	intron-Distal	4.21948	13.63285	K562	TARDBP
chr8	91270915	91270961	+	intron-Distal	3.18091	5.75716	K562	SAFB2
chr8	91268734	91268771	+	intron-Distal	3.66248	5.67234	K562	NOLC1
chr8	91376535	91376642	+	intron-Distal	3.34813	10.15283	K562	PTBP1
chr8	91404987	91405070	+	intron-Distal	4.74582	5.59077	K562	ILF3
chr8	91484719	91484870	+	intron-Distal	5.40625	37.35068	K562	PTBP1
chr8	91361759	91361826	+	intron-Distal	3.45855	10.63600	K562	KHSRP
chr8	91503345	91503433	+	intron-Distal	4.11821	3.59917	K562	EXOSC5
chr8	91331963	91332032	+	intron-Distal	3.80335	3.37809	K562	HNRNPL
chr8	91270177	91270197	+	intron-Distal	3.41636	6.12546	K562	SAFB2
chr8	91509637	91509717	+	intron-Distal	4.01278	3.92684	K562	KHSRP
chr8	91327921	91328009	+	intron-Distal	4.48027	19.71883	K562	TARDBP
chr8	91273940	91273992	+	intron-Distal	3.45845	4.64200	K562	KHDRBS1
chr8	91268919	91268965	+	intron-Distal	3.01783	4.65667	K562	KHDRBS1
chr8	91504147	91504257	+	intron-Distal	3.50802	3.73364	K562	SAFB2
chr8	91270707	91270743	+	intron-Distal	3.29042	6.56297	K562	SAFB2
chr8	91276871	91276912	+	intron-Distal	4.66109	5.50697	K562	UCHL5
chr8	91283106	91283144	+	intron-Distal	3.14975	4.15505	K562	SAFB2
chr8	91317504	91317542	+	intron-Distal	3.69675	3.06411	K562	KHDRBS1
chr8	91536631	91536702	+	intron-Distal	4.78935	7.51195	K562	TARDBP
chr8	91535323	91535383	+	intron-Distal	3.94612	3.50894	K562	SAFB2
chr8	91269511	91269572	+	intron-Distal	4.23397	4.44943	K562	LARP4
chr8	91313216	91313302	+	intron-Distal	3.70294	6.48556	K562	KHDRBS1
chr8	91303924	91304003	+	intron-Distal	3.20845	11.88018	K562	HNRNPL
chr8	91267451	91267513	+	intron-Distal	3.73740	8.91137	K562	KHDRBS1
chr8	91365937	91366020	+	intron-Distal	3.34915	6.87261	K562	KHDRBS1
chr8	91268709	91268734	+	intron-Distal	4.57752	5.70989	K562	NOLC1
chr8	91267986	91268035	+	intron-Distal	3.29042	5.75716	K562	SAFB2
chr8	91306351	91306403	+	intron-Distal	3.67143	4.83972	K562	KHDRBS1
chr8	91361698	91361759	+	intron-Distal	3.09176	5.85121	K562	KHSRP
chr8	91244410	91244447	+	intron-Distal	3.80526	3.66668	K562	KHSRP
chr8	91275712	91275754	+	intron-Distal	5.46592	12.11137	K562	PTBP1
chr8	91362031	91362121	+	intron-Distal	4.26076	8.64076	K562	PTBP1
chr8	91289577	91289626	+	intron-Distal	3.80295	3.37923	K562	KHDRBS1
chr8	91297874	91297898	+	intron-Distal	5.07731	7.98841	K562	ILF3
chr8	91273931	91273992	+	intron-Distal	5.08730	8.17392	K562	SAFB2
chr8	91265704	91265818	+	intron-Distal	3.79147	8.74099	K562	PPIL4
chr8	91488961	91489161	+	intron-Distal	3.93852	3.02621	K562	CPSF6
chr8	91326525	91326643	+	intron-Distal	3.06031	9.07182	K562	KHSRP
chr8	91393931	91394051	+	intron-Distal	3.40899	4.15505	K562	SAFB2
chr8	91416910	91416987	+	intron-Distal	4.02212	4.07784	K562	SAFB2
chr8	91270477	91270542	+	intron-Distal	3.66384	5.41953	K562	PPIL4
chr8	91273067	91273157	+	intron-Distal	6.40101	9.51997	K562	LARP4
chr8	91272057	91272093	+	intron-Distal	3.97404	3.43111	K562	LARP4
chr8	91496082	91496164	+	intron-Distal	3.31072	3.75707	K562	SAFB2
chr8	91323528	91323614	+	intron-Distal	3.69080	9.25156	K562	SAFB2
chr8	91262839	91262887	+	intron-Distal	4.12962	11.61078	K562	TARDBP
chr8	91326959	91327027	+	intron-Distal	3.07013	4.34015	K562	SAFB2
chr8	91351512	91351568	+	intron-Distal	4.99881	7.30165	K562	QKI
chr8	91383313	91383398	+	intron-Distal	3.73966	10.28063	K562	SAFB2
chr8	91446263	91446371	+	intron-Distal	3.80616	5.67631	K562	KHDRBS1
chr8	91273112	91273155	+	intron-Distal	4.00321	3.25633	K562	PPIL4
chr8	91266502	91266546	+	intron-Distal	4.54524	5.89830	K562	PPIL4
chr8	91275923	91275955	+	intron-Distal	3.70305	3.05019	K562	PPIL4
chr8	91500518	91500589	+	intron-Distal	6.44875	22.01717	K562	EXOSC5
chr8	91501707	91501737	+	intron-Distal	4.96046	7.38793	K562	EXOSC5
chr8	91266901	91266973	+	intron-Distal	4.74693	7.73403	K562	PPIL4
chr8	91384324	91384375	+	intron-Distal	4.61326	5.20871	K562	SAFB2
chr8	91494793	91494855	+	intron-Distal	4.20192	4.58306	K562	SAFB2
chr8	91276176	91276203	+	intron-Distal	3.99122	3.43228	K562	SAFB2
chr8	91272856	91272898	+	intron-Distal	4.56284	4.97094	K562	SAFB2
chr8	91347575	91347690	+	intron-Distal	4.67403	4.78571	K562	UCHL5
chr8	91385937	91386007	+	intron-Distal	4.91744	8.58690	K562	SAFB2
chr8	91283996	91284044	+	intron-Distal	3.14874	3.29508	K562	PPIL4
chr8	91273537	91273595	+	intron-Distal	3.49952	5.38982	K562	PPIL4
chr8	91274947	91275040	+	intron-Distal	3.88169	10.71695	K562	PPIL4
chr8	91519677	91519782	+	intron-Distal	4.23356	5.56407	K562	QKI
chr8	91269820	91269906	+	intron-Distal	5.54633	13.36936	K562	KHDRBS1
chr8	91276237	91276304	+	intron-Distal	4.14117	7.60053	K562	SAFB2
chr8	91363365	91363435	+	intron-Distal	4.43683	3.90241	K562	MATR3
chr8	91382334	91382385	+	intron-Distal	3.50921	5.10657	K562	SAFB2
chr8	91377745	91377803	+	intron-Distal	6.69228	400.00000	K562	PTBP1
chr8	91328824	91328925	+	intron-Distal	4.15871	9.86295	K562	SAFB2
chr8	91283187	91283239	+	intron-Distal	3.23575	3.66398	K562	PPIL4
chr8	91268708	91268736	+	intron-Distal	3.90231	14.10943	K562	PPIL4
chr8	91303842	91303924	+	intron-Distal	4.29605	13.92815	K562	HNRNPL
chr8	91305383	91305437	+	intron-Distal	3.61132	4.97279	K562	MATR3
chr8	91326108	91326192	+	intron-Distal	4.05685	7.97140	K562	KHDRBS1
chr8	91299570	91299619	+	intron-Distal	3.43232	3.81669	K562	KHDRBS1
chr8	91269906	91269952	+	intron-Distal	3.43032	6.44180	K562	KHDRBS1
chr8	91296007	91296093	+	intron-Distal	3.98900	7.83467	K562	ILF3
chr8	91270587	91270636	+	intron-Distal	3.30070	11.47142	K562	SAFB2
chr8	91432659	91432777	+	intron-Distal	4.61891	6.76480	K562	HNRNPL
chr8	91501659	91501705	+	intron-Distal	3.98256	6.11008	K562	EXOSC5
chr8	91244447	91244499	+	intron-Distal	3.68960	5.78005	K562	KHSRP
chr8	91421457	91421531	+	intron-Distal	3.66336	3.06150	K562	KHSRP
chr8	91285220	91285293	+	intron-Distal	3.75196	6.21427	K562	PPIL4
chr8	91401217	91401271	+	intron-Distal	3.95334	3.06194	K562	ILF3
chr8	91264182	91264189	+	intron-Distal	7.15614	33.71699	K562	LIN28B
chr8	91521801	91521878	+	intron-Distal	5.21629	22.12948	K562	PTBP1
chr8	91269646	91269763	+	intron-Distal	4.30775	7.51820	K562	LARP4
chr8	91284558	91284620	+	intron-Distal	4.06802	4.19590	K562	HLTF
chr8	91275594	91275640	+	intron-Distal	5.45246	62.18800	K562	PTBP1
chr8	91304850	91304946	+	intron-Distal	4.40380	9.54012	K562	MATR3
chr8	91283680	91283765	+	intron-Distal	3.35810	6.57459	K562	PPIL4
chr8	91265600	91265704	+	intron-Distal	4.61803	13.68394	K562	PPIL4
chr8	91377727	91377794	+	intron-Distal	3.45396	6.48437	K562	MATR3
chr8	91385388	91385478	+	intron-Distal	4.03252	12.03358	K562	SAFB2
chr8	91384787	91384892	+	intron-Distal	3.09812	8.33173	K562	SAFB2
chr8	91283788	91283873	+	intron-Distal	3.21707	8.09604	K562	PPIL4
chr8	91265985	91266039	+	intron-Distal	3.84893	7.60772	K562	PPIL4
chr8	91438721	91438768	+	intron-Distal	3.94945	3.28572	K562	HNRNPM
chr8	91419035	91419129	+	intron-Distal	3.39617	7.52497	K562	SAFB2
chr8	91386753	91386843	+	intron-Distal	4.53008	10.50922	K562	SAFB2
chr8	91270197	91270270	+	intron-Distal	4.09772	16.02574	K562	SAFB2
chr8	91413865	91413915	+	intron-Distal	4.38979	4.80399	K562	EXOSC5
chr8	91385875	91385913	+	intron-Distal	4.20192	4.58306	K562	SAFB2
chr8	91383147	91383234	+	intron-Distal	3.69345	3.46788	K562	HLTF
chr8	91418704	91418772	+	intron-Distal	3.87270	3.65589	K562	SAFB2
chr8	91268736	91268781	+	intron-Distal	4.60067	21.17445	K562	PPIL4
chr8	91263956	91264004	+	intron-Distal	3.88749	8.92860	K562	KHDRBS1
chr8	91295543	91295594	+	intron-Distal	4.83480	6.81978	K562	KHDRBS1
chr8	91377724	91377745	+	intron-Distal	6.43634	51.11043	K562	PTBP1
chr8	91271776	91271852	+	intron-Distal	4.02689	9.16406	K562	SAFB2
chr8	91270490	91270555	+	intron-Distal	4.48451	10.91758	K562	SAFB2
chr8	91420743	91420836	+	intron-Distal	3.00921	3.06830	K562	SAFB2
chr8	91297914	91298023	+	intron-Distal	4.38325	15.17191	K562	ILF3
chr8	91502334	91502399	+	intron-Distal	3.91980	5.50914	K562	EXOSC5
chr8	91415298	91415375	+	intron-Distal	3.04223	3.29251	K562	KHSRP
chr8	91302986	91303055	+	intron-Distal	3.29676	5.79981	K562	PTBP1
chr8	91518704	91518805	+	intron-Distal	4.24118	4.72697	K562	SAFB2
chr8	91356353	91356428	+	intron-Distal	3.94223	3.84033	K562	SAFB2
chr8	91284620	91284706	+	intron-Distal	4.23694	4.92751	K562	HLTF
chr8	91383093	91383152	+	intron-Distal	3.88336	7.81859	K562	SAFB2
chr8	91274566	91274619	+	intron-Distal	3.26020	6.26731	K562	KHDRBS1
chr8	91512860	91512937	+	intron-Distal	4.59841	5.79092	K562	TARDBP
chr8	91270411	91270453	+	intron-Distal	3.40519	5.15435	K562	PPIL4
chr8	91321453	91321526	+	intron-Distal	3.41621	4.63993	K562	TARDBP
chr8	91269604	91269669	+	intron-Distal	4.52560	11.14926	K562	SAFB2
chr8	91283768	91283872	+	intron-Distal	4.39748	6.62936	K562	HLTF
chr8	91284619	91284726	+	intron-Distal	5.44268	13.29611	K562	PPIL4
chr8	91384587	91384646	+	intron-Distal	4.04123	4.57557	K562	PPIL4
chr8	91266069	91266131	+	intron-Distal	4.04377	9.05965	K562	PPIL4
chr8	91270073	91270095	+	intron-Distal	3.62082	3.95937	K562	UCHL5
chr8	91497300	91497419	+	intron-Distal	4.16804	3.95960	K562	SAFB2
chr8	91267979	91268009	+	intron-Distal	3.81779	3.65638	K562	PPIL4
chr8	91384589	91384684	+	intron-Distal	4.20096	11.82713	K562	SAFB2
chr8	91324980	91325066	+	intron-Distal	3.21152	5.64519	K562	KHDRBS1
chr8	91385117	91385178	+	intron-Distal	5.38375	3.78444	K562	LARP4
chr8	91303870	91303922	+	intron-Distal	4.20398	21.75498	K562	PTBP1
chr8	91387814	91387858	+	intron-Distal	4.24972	4.16015	K562	SAFB2
chr8	91318324	91318411	+	intron-Distal	4.83058	7.67146	K562	TARDBP
chr8	91331980	91332043	+	intron-Distal	3.93009	3.06617	K562	HNRNPK
chr8	91363007	91363122	+	intron-Distal	3.57199	3.45178	K562	MATR3
chr8	91337008	91337077	+	intron-Distal	3.26150	3.46712	K562	SAFB2
chr8	91264189	91264243	+	intron-Distal	7.53458	50.10522	K562	LIN28B
chr8	91267593	91267624	+	intron-Distal	4.04300	4.28339	K562	KHDRBS1
chr8	91305955	91306024	+	intron-Distal	3.03962	4.63722	K562	MATR3
chr8	91267311	91267361	+	intron-Distal	3.86134	5.35818	K562	SAFB2
chr8	91323970	91324060	+	intron-Distal	3.85376	3.33309	K562	SAFB
chr8	91318441	91318502	+	intron-Distal	3.20499	5.86546	K562	KHDRBS1
chr8	91376034	91376098	+	intron-Distal	4.19738	7.97776	K562	TARDBP
chr8	91270565	91270610	+	intron-Distal	5.27406	9.89718	K562	PPIL4
chr8	91269115	91269135	+	intron-Distal	4.33720	3.96666	K562	LARP4
chr8	91296111	91296159	+	intron-Distal	4.81427	5.33932	K562	ILF3
chr8	91241520	91241577	+	intron-Distal	3.59352	3.06411	K562	KHDRBS1
chr8	91282903	91282975	+	intron-Distal	3.04127	3.91539	K562	HNRNPL
chr8	91254280	91254371	+	intron-Distal	3.99847	3.84033	K562	SAFB2
chr8	91480942	91481036	+	intron-Distal	3.18752	4.05663	K562	HNRNPL
chr8	91540667	91540746	+	intron-Distal	3.06284	3.46712	K562	SAFB2
chr8	91267036	91267089	+	intron-Distal	3.07670	6.48249	K562	KHDRBS1
chr8	91267304	91267350	+	intron-Distal	4.44429	5.66082	K562	PPIL4
chr8	91269669	91269702	+	intron-Distal	4.15751	8.00568	K562	SAFB2
chr8	91323940	91324031	+	intron-Distal	3.84869	7.60053	K562	SAFB2
chr8	91262778	91262825	+	intron-Distal	4.87190	14.53709	K562	TARDBP
chr8	91268994	91269020	+	intron-Distal	4.21829	9.23705	K562	KHDRBS1
chr8	91269599	91269714	+	intron-Distal	5.10959	7.92887	K562	NOLC1
chr8	91562607	91562658	+	intron-Distal	4.25432	3.55787	K562	PTBP1
chr8	91267723	91267774	+	intron-Distal	4.89613	8.77040	K562	KHDRBS1
chr8	91268905	91269034	+	intron-Distal	3.72932	4.65362	K562	RBFOX2
chr8	91444443	91444497	+	intron-Distal	3.69050	3.33164	K562	SAFB2
chr8	91386262	91386295	+	intron-Distal	4.34647	4.37667	K562	SAFB2
chr8	91315662	91315733	+	intron-Distal	3.19792	3.63194	K562	HNRNPL
chr8	91489017	91489074	+	intron-Distal	4.01777	3.90026	K562	KHSRP
chr8	91270555	91270587	+	intron-Distal	4.41890	15.34755	K562	SAFB2
chr8	91484568	91484678	+	intron-Distal	3.87161	10.96533	K562	PTBP1
chr8	91435089	91435180	+	intron-Distal	4.42828	7.56720	K562	PTBP1
chr8	91273520	91273604	+	intron-Distal	4.09330	7.71442	K562	HLTF
chr8	91276237	91276305	+	intron-Distal	4.11876	9.00047	K562	PPIL4
chr8	91244499	91244557	+	intron-Distal	4.92074	5.62258	K562	KHSRP
chr8	91405172	91405322	+	intron-Distal	3.35287	7.12738	K562	ILF3
chr8	91348495	91348590	+	intron-Distal	3.88013	3.25633	K562	PPIL4
chr8	91274914	91274950	+	intron-Distal	4.06284	4.30215	K562	SAFB2
chr8	91362032	91362140	+	intron-Distal	4.75328	7.02715	K562	MATR3
chr8	91269005	91269034	+	intron-Distal	3.65170	5.97050	K562	SAFB2
chr8	91307706	91307760	+	intron-Distal	3.27638	4.08075	K562	SAFB2
chr8	91268582	91268620	+	intron-Distal	3.72419	5.59512	K562	LARP4
chr8	91273992	91274058	+	intron-Distal	4.51760	11.78306	K562	SAFB2
chr8	91282602	91282679	+	intron-Distal	3.63913	7.05032	K562	PTBP1
chr8	91283258	91283293	+	intron-Distal	3.88124	3.84033	K562	SAFB2
chr8	91385133	91385221	+	intron-Distal	5.09140	9.77714	K562	SAFB2
chr8	91303831	91303926	+	intron-Distal	3.71288	6.48437	K562	MATR3
chr8	91302153	91302231	+	intron-Distal	3.09864	7.82408	K562	KHDRBS1
chr8	91266863	91266979	+	intron-Distal	3.40022	6.23049	K562	SAFB2
chr8	91384918	91384981	+	intron-Distal	3.68006	6.16438	K562	SAFB2
chr8	91367999	91368139	+	intron-Distal	3.71785	5.06208	K562	MATR3
chr8	91273005	91273030	+	intron-Distal	4.11275	4.56270	K562	SAFB2
chr8	91385081	91385165	+	intron-Distal	3.74373	3.65130	K562	HLTF
chr8	91332606	91332660	+	intron-Distal	3.12762	3.22514	K562	KHDRBS1
chr8	91523279	91523394	+	intron-Distal	3.39194	9.62771	K562	SAFB2
chr8	91270173	91270222	+	intron-Distal	4.28025	5.23912	K562	PPIL4
chr8	91311145	91311217	+	intron-Distal	4.97287	8.99805	K562	KHDRBS1
chr8	91419858	91419953	+	intron-Distal	5.00008	8.62021	K562	HNRNPL
chr8	91273514	91273601	+	intron-Distal	3.15085	11.40941	K562	SAFB2
chr8	91443394	91443480	+	intron-Distal	3.01334	3.34630	K562	SAFB2
chr8	91395069	91395115	+	intron-Distal	3.73087	3.17740	K562	CSTF2T
chr8	91304058	91304105	+	intron-Distal	3.60748	5.22442	K562	MATR3
chr8	91348455	91348589	+	intron-Distal	3.70114	11.86360	K562	SAFB2
chr8	91303750	91303792	+	intron-Distal	3.38655	4.23794	K562	HNRNPL
chr8	91263650	91263698	+	intron-Distal	3.13624	4.87071	K562	KHDRBS1
chr8	91305704	91305767	+	intron-Distal	3.15189	3.45841	K562	HNRNPK
chr8	91270270	91270329	+	intron-Distal	3.43044	9.49874	K562	SAFB2
chr8	91520797	91520883	+	intron-Distal	3.14092	3.87218	K562	SAFB2
chr8	91274906	91274947	+	intron-Distal	3.04444	3.29508	K562	PPIL4
chr8	91269525	91269604	+	intron-Distal	5.50296	11.60972	K562	SAFB2
chr8	91494960	91495059	+	intron-Distal	3.17424	5.17158	K562	SAFB2
chr8	91263884	91263935	+	intron-Distal	3.04811	5.70556	K562	KHDRBS1
chr8	91273729	91273797	+	intron-Distal	5.13199	10.31688	K562	SAFB2
chr8	91284629	91284727	+	intron-Distal	3.06533	12.65797	K562	SAFB2
chr8	91269014	91269074	+	intron-Distal	3.98582	6.98894	K562	LARP4
chr8	91276158	91276219	+	intron-Distal	3.21805	6.57459	K562	PPIL4
chr8	91269347	91269389	+	intron-Distal	4.03368	4.26198	K562	PPIL4
chr8	91254061	91254172	+	intron-Distal	3.56030	3.03056	K562	PPIL4
chr8	91538670	91538823	+	intron-Distal	4.22280	5.35296	K562	KHDRBS1
chr8	91308685	91308752	+	intron-Distal	3.19874	3.67498	K562	SAFB2
chr8	91271803	91271844	+	intron-Distal	3.80970	3.25633	K562	PPIL4
chr8	91402398	91402499	+	intron-Distal	4.22436	3.31709	K562	ILF3
chr8	91318746	91318824	+	intron-Distal	3.12635	5.66852	K562	KHDRBS1
chr8	91318554	91318580	+	intron-Distal	3.67143	3.29026	K562	KHDRBS1
chr8	91273752	91273828	+	intron-Distal	4.58773	7.00566	K562	PPIL4
chr8	91266511	91266579	+	intron-Distal	3.03282	3.80951	K562	HLTF
chr8	91275775	91275884	+	intron-Distal	5.71885	88.08906	K562	PTBP1
chr8	91325170	91325355	+	intron-Distal	4.33767	15.87952	K562	SAFB2
chr8	91484804	91484914	+	intron-Distal	3.38931	8.40144	K562	ILF3
chr8	91264079	91264134	+	intron-Distal	3.60397	10.31525	K562	KHDRBS1
chr8	91376469	91376530	+	intron-Distal	3.81124	3.37631	K562	HNRNPL
chr8	91338531	91338640	+	intron-Distal	3.71868	14.37840	K562	QKI
chr8	91282796	91282861	+	intron-Distal	3.65843	5.85304	K562	KHDRBS1
chr8	91282701	91282777	+	intron-Distal	4.83923	7.46541	K562	KHDRBS1
chr8	91266912	91266986	+	intron-Distal	3.43801	4.12254	K562	LARP4
chr8	91385523	91385594	+	intron-Distal	3.42779	7.13209	K562	SAFB2
chr8	91493451	91493527	+	intron-Distal	3.22116	7.54090	K562	SAFB2
chr8	91275513	91275594	+	intron-Distal	5.07607	63.48108	K562	PTBP1
chr8	91304671	91304750	+	intron-Distal	5.49756	12.47895	K562	MATR3
chr8	91394655	91394758	+	intron-Distal	3.63274	5.35818	K562	SAFB2
chr8	91268669	91268695	+	intron-Distal	3.31633	4.63052	K562	PPIL4
chr8	91480838	91480913	+	intron-Distal	3.29689	4.20477	K562	HNRNPL
chr8	91261658	91261733	+	intron-Distal	4.19602	7.71869	K562	LIN28B
chr8	91270037	91270069	+	intron-Distal	4.64682	5.63023	K562	SAFB2
chr8	91284898	91284955	+	intron-Distal	4.51833	6.10381	K562	PPIL4
chr8	91273302	91273373	+	intron-Distal	4.88915	8.00579	K562	SAFB2
chr8	91368008	91368104	+	intron-Distal	4.12426	6.84523	K562	PTBP1
chr8	91264156	91264182	+	intron-Distal	5.22620	14.37500	K562	LIN28B
chr8	91276328	91276365	+	intron-Distal	4.18773	4.79322	K562	SAFB2
chr8	91305300	91305451	+	intron-Distal	3.87608	9.94568	K562	HNRNPK
chr8	91273718	91273771	+	intron-Distal	4.46391	6.17494	K562	KHDRBS1
chr8	91276448	91276504	+	intron-Distal	4.40971	5.90477	K562	PPIL4
chr8	91578323	91578368	+	intron-Distal	4.39308	3.92866	K562	PTBP1
chr8	91363122	91363214	+	intron-Distal	4.69861	5.90588	K562	MATR3
chr8	91283897	91283951	+	intron-Distal	3.44180	7.59221	K562	SAFB2
chr8	91269514	91269573	+	intron-Distal	4.35567	3.28462	K562	TAF15
chr8	91386377	91386481	+	intron-Distal	3.82719	3.82290	K562	HLTF
chr8	91270563	91270620	+	intron-Distal	6.32995	9.07163	K562	LARP4
chr8	91303543	91303643	+	intron-Distal	3.44256	6.49608	K562	HNRNPK
chr8	91267130	91267167	+	intron-Distal	3.07376	3.28005	K562	PPIL4
chr8	91305980	91306022	+	intron-Distal	3.79752	22.07110	K562	PTBP1
chr8	91504022	91504093	+	intron-Distal	3.29788	3.31097	K562	SLTM
chr8	91269669	91269729	+	intron-Distal	4.91676	9.02090	K562	PPIL4
chr8	91283792	91283865	+	intron-Distal	3.08569	6.88921	K562	SAFB2
chr8	91384465	91384551	+	intron-Distal	4.04888	7.91406	K562	KHDRBS1
chr8	91276753	91276839	+	intron-Distal	3.20944	6.21345	K562	SLTM
chr8	91493891	91493947	+	intron-Distal	3.06722	3.67498	K562	SAFB2
chr8	91305547	91305616	+	intron-Distal	4.12607	9.70086	K562	PTBP1
chr8	91267099	91267172	+	intron-Distal	3.50446	9.10739	K562	SAFB2
chr8	91400909	91401022	+	intron-Distal	4.23911	10.31493	K562	ILF3
chr8	91394796	91394923	+	intron-Distal	3.63927	9.52927	K562	KHSRP
chr8	91421052	91421110	+	intron-Distal	3.06853	3.68839	K562	KHSRP
chr8	91268367	91268410	+	intron-Distal	3.53503	5.18925	K562	PPIL4
chr8	91269702	91269738	+	intron-Distal	4.22016	6.96497	K562	SAFB2
chr8	91506869	91506962	+	intron-Distal	4.29335	5.42824	K562	SAFB2
chr8	91328520	91328634	+	intron-Distal	5.57547	28.33439	K562	QKI
chr8	91267466	91267542	+	intron-Distal	3.30803	4.50730	K562	HLTF
chr8	91265407	91265481	+	intron-Distal	4.73575	6.52585	K562	PPIL4
chr8	91304319	91304367	+	intron-Distal	3.73535	5.84939	K562	HNRNPL
chr8	91270559	91270632	+	intron-Distal	3.35130	4.17302	K562	UCHL5
chr8	91268288	91268351	+	intron-Distal	3.78523	9.16406	K562	SAFB2
chr8	91282915	91282962	+	intron-Distal	3.05188	3.51543	K562	PPIL4
chr8	91422628	91422700	+	intron-Distal	3.00065	3.42428	K562	HNRNPL
chr8	91339262	91339393	+	intron-Distal	3.87687	6.13897	K562	PTBP1
chr8	91418134	91418212	+	intron-Distal	3.06722	3.26524	K562	SAFB2
chr8	91421353	91421435	+	intron-Distal	3.35858	4.30679	K562	KHSRP
chr8	91259308	91259374	+	intron-Distal	3.85312	6.30077	K562	HNRNPL
chr8	91417964	91418019	+	intron-Distal	3.85970	3.84033	K562	SAFB2
chr8	91268974	91268994	+	intron-Distal	4.37959	5.09407	K562	KHDRBS1
chr8	91508473	91508541	+	intron-Distal	3.79015	3.50894	K562	SAFB2
chr8	91283892	91283958	+	intron-Distal	4.69767	7.55460	K562	PPIL4
chr8	91274782	91274826	+	intron-Distal	3.33299	4.52961	K562	PPIL4
chr8	91386843	91386907	+	intron-Distal	4.88406	8.60725	K562	SAFB2
chr8	91322178	91322211	+	intron-Distal	3.79892	3.19638	K562	SAFB2
chr8	91269700	91269774	+	intron-Distal	3.09165	4.17702	K562	HLTF
chr8	91448576	91448682	+	intron-Distal	4.96728	6.40067	K562	PTBP1
chr8	91270695	91270779	+	intron-Distal	3.19123	6.02829	K562	PPIL4
chr8	91289426	91289492	+	intron-Distal	4.00832	8.60380	K562	KHDRBS1
chr8	91278585	91278664	+	intron-Distal	4.27832	4.07072	K562	UCHL5
chr8	91303836	91303870	+	intron-Distal	3.08924	7.65418	K562	PTBP1
chr8	91304541	91304607	+	intron-Distal	4.02460	10.47773	K562	PTBP1
chr8	91244557	91244607	+	intron-Distal	3.41768	3.48890	K562	KHSRP
chr8	91258522	91258580	+	intron-Proximal	3.11498	5.08959	K562	TIA1
chr8	91233874	91233884	+	intron-Proximal	4.02172	5.63961	K562	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for LINC00534 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LINC00534 is not available on ENCORE database.
39 RBPs can affect the levels of LINC00534.

The Knockdown/knockout RNA-Seq assay for LINC00534 is not available on ENCORE database.

39 RBPs can affect the gene expression of LINC00534 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LINC00534	ENSG00000253394.1	202.49940	92.37360	1.13230	6.60920	4.73270	K562	AARS
LINC00534	ENSG00000253394.1	141.28020	306.06440	-1.11530	4.96160	4.07640	K562	AKAP8L
LINC00534	ENSG00000253394.1	32.72290	137.27690	-2.06870	6.39540	5.56410	K562	AQR
LINC00534	ENSG00000253394.1	198.56810	321.10510	-0.69340	2.79540	1.87730	K562	ATP5C1
LINC00534	ENSG00000253394.1	116.36790	67.97850	0.77540	2.70090	1.66150	K562	CCAR1
LINC00534	ENSG00000253394.1	233.35130	132.86220	0.81250	4.67720	3.21350	K562	CPEB4
LINC00534	ENSG00000253394.1	234.74560	137.56320	0.77090	4.28650	3.50030	K562	DDX47
LINC00534	ENSG00000253394.1	253.47180	87.16070	1.54000	14.44690	12.99940	K562	EIF2S2
LINC00534	ENSG00000253394.1	157.64330	88.63950	0.83050	3.11950	2.01820	K562	EIF3D
LINC00534	ENSG00000253394.1	73.96980	117.66690	-0.66970	2.06250	1.32670	K562	FIP1L1
LINC00534	ENSG00000253394.1	171.00130	87.72270	0.96290	4.42940	2.94250	K562	FKBP4
LINC00534	ENSG00000253394.1	269.50030	148.89830	0.85590	4.90460	3.75830	K562	FMR1
LINC00534	ENSG00000253394.1	246.54060	96.78350	1.34890	9.45220	7.52060	K562	HNRNPM
LINC00534	ENSG00000253394.1	526.15650	159.53010	1.72160	23.97400	21.85030	K562	HSPD1
LINC00534	ENSG00000253394.1	29.18580	71.01500	-1.28290	3.64470	1.91760	K562	ILF3
LINC00534	ENSG00000253394.1	173.22020	324.86690	-0.90720	2.91760	2.06810	K562	KIF1C
LINC00534	ENSG00000253394.1	208.84000	119.30430	0.80770	3.17250	2.16470	K562	KRR1
LINC00534	ENSG00000253394.1	185.73360	102.51670	0.85730	4.17610	2.30010	K562	LIN28B
LINC00534	ENSG00000253394.1	82.72740	186.46470	-1.17250	4.13510	2.98930	K562	MATR3
LINC00534	ENSG00000253394.1	131.09410	255.08020	-0.96030	3.37250	2.37980	K562	NAA15
LINC00534	ENSG00000253394.1	71.96870	163.81830	-1.18670	5.66410	4.46730	K562	PCBP3
LINC00534	ENSG00000253394.1	36.52530	125.65470	-1.78250	8.93330	7.52600	K562	POLR2G
LINC00534	ENSG00000253394.1	112.07020	189.02960	-0.75420	3.42840	2.52140	K562	PUF60
LINC00534	ENSG00000253394.1	304.66440	201.11160	0.59910	3.28060	2.11380	K562	PUM1
LINC00534	ENSG00000253394.1	209.74960	103.42520	1.02000	4.11880	2.32560	K562	RAVER1
LINC00534	ENSG00000253394.1	112.82900	295.76280	-1.39030	6.25010	5.38370	K562	RBM15
LINC00534	ENSG00000253394.1	418.80210	185.06980	1.17810	5.45340	2.52600	K562	DROSHA
LINC00534	ENSG00000253394.1	45.76150	111.95980	-1.29080	4.92400	3.47870	K562	SAFB
LINC00534	ENSG00000253394.1	55.98020	150.51030	-1.42690	5.18250	3.16690	K562	SFPQ
LINC00534	ENSG00000253394.1	246.34090	132.97560	0.88940	4.01030	1.88980	K562	SMN1
LINC00534	ENSG00000253394.1	163.12360	78.38880	1.05710	4.90830	3.42290	K562	SRFBP1
LINC00534	ENSG00000253394.1	69.23830	178.02920	-1.36250	4.58950	3.68240	K562	SRSF1
LINC00534	ENSG00000253394.1	111.64530	180.12680	-0.69010	2.05200	1.43670	K562	TARDBP
LINC00534	ENSG00000253394.1	173.96230	92.61120	0.90940	4.10550	2.90570	K562	TRIM56
LINC00534	ENSG00000253394.1	65.79190	108.57830	-0.72280	2.27210	1.54540	K562	U2AF2
LINC00534	ENSG00000253394.1	228.69610	114.45930	0.99850	4.78330	3.86500	K562	UPF1
LINC00534	ENSG00000253394.1	169.53270	307.75000	-0.86020	3.59900	2.06300	K562	UTP18
LINC00534	ENSG00000253394.1	149.45930	97.93820	0.60970	2.27560	1.48110	K562	WDR3
LINC00534	ENSG00000253394.1	178.01340	101.85170	0.80540	4.44170	3.38820	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LINC00534 is not available on ENCORE database.

2 RBPs can affect the splicing of LINC00534 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	LINC00534	ENSG00000253394.1	chr8	+	91363768	91363894			91258407	91258498	91399794	91400180	0.23200	0.00007	0.02949	included	K562	PUM1
SE	LINC00534	ENSG00000253394.1	chr8	+	91363768	91363894			91258407	91258498	91399794	91400180	0.20900	0.00101	0.09010	included	K562	CPSF6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LINC00534

General Information

Functions

Localization

Domains (AlphaFold: LINC00534)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LINC00534 is not avaliable on ENCORE database.

26 proteins are bound to LINC00534 RNA:

eCLIP assay for LINC00534 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LINC00534 is not available on ENCORE database.

39 RBPs can affect the gene expression of LINC00534 :

The Knockdown/knockout RNA-Seq assay for LINC00534 is not available on ENCORE database.

2 RBPs can affect the splicing of LINC00534 :

The Knockdown/knockout RNA-Seq assay for LINC00534 is not avaliable on ENCORE database.