AC004980.7

General Information

Gene Name       : AC004980.7
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC004980.7)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC004980.7 is not avaliable on ENCORE database.



Proteins bound to RNA

  • AC004980.7 RNA is bound by 31 proteins.  







eCLIP assay for AC004980.7 is not avaliable on ENCORE database.





31 proteins are bound to AC004980.7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77622112176221196+intron-Distal3.054083.41665HepG2GRWD1
chr77622131476221419+intron-Distal3.766644.22172HepG2SRSF9
chr77622473076224794+intron-Distal4.6930812.61905K562SAFB2
chr77618866276188726+intron-Distal3.123208.52609K562HNRNPL
chr77619501676195077+intron-Distal4.577196.05753HepG2SUGP2
chr77618999676190020+intron-Distal3.9442214.89055K562HNRNPL
chr77622414976224183+intron-Distal3.617794.16915HepG2HLTF
chr77618836876188408+intron-Distal3.153089.02115HepG2HNRNPL
chr77621722576217258+intron-Distal3.315154.03313K562HNRNPL
chr77622670876226779+intron-Distal3.089063.10112K562UCHL5
chr77619008476190115+intron-Distal4.0537515.37843HepG2HNRNPL
chr77618912276189163+intron-Distal4.773268.12733K562HNRNPL
chr77619575876195823+intron-Distal4.251737.51194HepG2MATR3
chr77624827976248381+intron-Distal3.587084.59821K562ILF3
chr77619134276191383+intron-Distal4.042923.24322HepG2MATR3
chr77619988576199999+intron-Distal3.436576.27063HepG2HNRNPL
chr77618900076189042+intron-Distal4.2302519.43078HepG2HNRNPL
chr77622150576221553+intron-Distal3.698717.16053HepG2HLTF
chr77619312476193177+intron-Distal4.862447.38107K562HNRNPM
chr77618957376189621+intron-Distal4.1252912.55079K562HNRNPK
chr77618925776189300+intron-Distal3.069906.73580K562PTBP1
chr77619312776193172+intron-Distal3.816003.39857HepG2HNRNPM
chr77619196676192029+intron-Distal6.4567721.90835K562HNRNPM
chr77618324576183319+intron-Distal3.115554.51517HepG2XRCC6
chr77617905776179166+intron-Distal,intron-Proximal3.015508.14820HepG2SRSF1
chr77621719276217328+intron-Distal5.1192814.73155K562MATR3
chr77618993276189975+intron-Distal3.157223.62826K562HNRNPL
chr77618900276189052+intron-Distal4.0311520.03487K562PTBP1
chr77622226676222307+intron-Distal3.299425.60151HepG2HLTF
chr77618898876189056+intron-Distal3.5742216.82716HepG2PTBP1
chr77623698276237022+intron-Distal3.484725.39438HepG2HNRNPC
chr77623315776233165+intron-Distal3.105408.72471HepG2HNRNPC
chr77619311076193173+intron-Distal3.714543.43829K562EXOSC5
chr77622365976223731+intron-Distal4.5320913.22362K562SAFB2
chr77619310976193179+intron-Distal3.707254.81844HepG2SUGP2
chr77622192276221972+intron-Distal3.287746.74137K562SAFB2
chr77621531776215405+intron-Distal3.221333.36613K562MATR3
chr77619197376192018+intron-Distal4.238198.21325K562EXOSC5
chr77619574376195834+intron-Distal4.9371916.54669HepG2SUGP2
chr77619578376195812+intron-Distal5.209397.12711K562HNRNPM
chr77618926076189309+intron-Distal3.6682610.69805HepG2PTBP1
chr77624757576247663+intron-Distal3.820493.56019HepG2GRWD1
chr77621965976219780+intron-Distal3.375223.33755HepG2RBM22
chr77621657276216623+intron-Distal4.286868.58056HepG2MATR3
chr77622102676221083+intron-Distal3.135123.40562HepG2SRSF9
chr77621741076217465+intron-Distal3.8713911.23561K562HNRNPL
chr77622163876221681+intron-Distal3.015275.55322HepG2HLTF
chr77619809676198150+intron-Distal3.289224.69565K562KHDRBS1
chr77621752876217598+intron-Distal3.405714.51915K562MATR3
chr77619001676190036+intron-Distal3.8685211.34708HepG2HNRNPL
chr77624891676248932+intron-Distal3.357027.29123K562ILF3
chr77622205576222131+intron-Distal4.1646915.88968K562SAFB2
chr77621692576217005+intron-Distal3.6183312.91991HepG2MATR3
chr77622536076225412+intron-Distal4.750147.76000K562SAFB2
chr77618924676189306+intron-Distal3.7079516.55710HepG2HNRNPL
chr77622839276228479+intron-Distal4.056103.91527K562PPIL4
chr77618952376189582+intron-Distal3.445835.88643HepG2RBFOX2
chr77621690076216946+intron-Distal3.411567.90347HepG2SUGP2
chr77621563976215720+intron-Distal3.8095414.70450HepG2SUGP2
chr77621724376217320+intron-Distal3.102375.37771HepG2PTBP1
chr77617908776179149+intron-Distal4.289333.71613K562UCHL5
chr77621984876219915+intron-Distal3.028923.10112K562UCHL5
chr77622452476224570+intron-Distal5.1786510.73655K562SAFB2
chr77622404076224078+intron-Distal3.986356.78672K562SAFB2
chr77622095976220986+intron-Distal3.736875.55255HepG2HLTF
chr77622407876224144+intron-Distal3.518369.27930K562SAFB2
chr77619521676195295+intron-Distal4.689235.04209K562MATR3
chr77619002076190040+intron-Distal3.6631911.10151K562HNRNPL
chr77622060576220665+intron-Distal4.251965.07394K562PPIL4
chr77622582676225887+intron-Distal3.030056.29653HepG2HLTF
chr77622518676225269+intron-Distal5.5525011.26617HepG2HLTF
chr77619815276198267+intron-Distal3.190757.28281HepG2HNRNPL
chr77621694676217017+intron-Distal4.0653420.94332HepG2SUGP2
chr77624600176246090+intron-Distal3.461643.84723K562ILF3
chr77619503076195067+intron-Distal3.659985.28137HepG2MATR3
chr77622828776228392+intron-Distal4.003783.90264K562PPIL4
chr77623696076236982+intron-Distal3.365224.63037HepG2HNRNPC
chr77621947576219535+intron-Distal3.390616.34609K562SAFB2
chr77621953876219590+intron-Distal3.369003.35103HepG2QKI
chr77621595776216011+intron-Distal3.015283.42334K562KHDRBS1
chr77622473976224792+intron-Distal4.395834.44454K562UCHL5
chr77622831876228393+intron-Distal3.3784810.23400K562SAFB2
chr77622243376222463+intron-Distal3.714956.16467K562SAFB2
chr77619575176195839+intron-Distal4.696275.12432K562EXOSC5
chr77621753076217570+intron-Distal3.588028.16357HepG2SUGP2
chr77621760376217648+intron-Distal3.755028.60624HepG2SUGP2
chr77618904276189075+intron-Distal4.0992715.57450HepG2HNRNPL
chr77619524276195293+intron-Distal5.532547.87294HepG2MATR3
chr77619164376191712+intron-Distal4.413468.84871HepG2MATR3
chr77621642776216480+intron-Distal3.402137.90347HepG2SUGP2
chr77622496176225022+intron-Distal3.7497210.38836K562SAFB2
chr77618835576188438+intron-Distal3.376485.15675HepG2CSTF2
chr77622114476221188+intron-Distal3.789335.30520K562UCHL5
chr77621720876217327+intron-Distal3.116529.35587HepG2MATR3
chr77621011676210172+intron-Distal3.809203.45317HepG2HNRNPL
chr77618952876189615+intron-Distal3.081225.27911K562RBFOX2
chr77618924476189302+intron-Distal3.8323713.37908K562HNRNPL
chr77624445576244571+intron-Distal4.592385.62822K562HNRNPK
chr77621854076218588+intron-Distal4.747865.72657HepG2MATR3
chr77621739876217471+intron-Distal3.555508.97268HepG2HNRNPL
chr77622053676220584+intron-Distal3.186685.10919K562SLTM
chr77618389576183929+intron-Distal4.066557.58805HepG2HNRNPC
chr77622711976227161+intron-Distal3.618635.53469K562SAFB2
chr77622473676224786+intron-Distal3.883056.43511HepG2HLTF
chr77622839376228465+intron-Distal3.7713212.61020K562SAFB2
chr77619035476190377+intron-Distal3.539139.66830K562KHSRP
chr77619523376195299+intron-Distal5.6548610.83230K562PTBP1
chr77622722476227281+intron-Distal3.375877.14447K562SAFB2
chr77624893276248963+intron-Distal3.357027.29123K562ILF3
chr77619961976199732+intron-Distal3.198607.35634HepG2RBFOX2
chr77618952576189616+intron-Distal4.151409.00665HepG2PCBP2
chr77618953876189573+intron-Distal3.276033.62729K562HNRNPK
chr77618887976188901+intron-Distal4.9524315.29041K562HNRNPL
chr77622804076228096+intron-Distal3.555727.91739K562SAFB2
chr77619312276193173+intron-Distal3.901036.45086HepG2MATR3
chr77618891676188964+intron-Distal4.6186521.34040HepG2HNRNPL
chr77618884076188879+intron-Distal3.858459.71603K562HNRNPL
chr77622073676220781+intron-Distal3.701925.10467K562SAFB2
chr77619320376193273+intron-Distal4.092697.32721HepG2MATR3
chr77619134576191379+intron-Distal4.214543.89080K562EXOSC5
chr77619554276195592+intron-Distal3.735238.25342HepG2HNRNPM
chr77622137076221437+intron-Distal3.960193.82719HepG2RBM22
chr77618934476189410+intron-Distal4.763894.79321K562RBFOX2
chr77618872876188782+intron-Distal3.286306.20894HepG2PTBP1
chr77621514976215215+intron-Distal3.102243.83994HepG2MATR3
chr77622103176221116+intron-Distal3.297029.43215HepG2HLTF
chr77621953576219592+intron-Distal3.5131210.51274K562SAFB2
chr77621984076219917+intron-Distal3.173386.75988K562SAFB2
chr77618971176189742+intron-Distal4.220384.24431HepG2RBFOX2
chr77619522276195292+intron-Distal5.266098.14620HepG2PTBP1
chr77622213176222159+intron-Distal3.053004.96681K562SAFB2
chr77619322376193271+intron-Distal4.014993.30696K562EXOSC5
chr77622416776224244+intron-Distal3.181696.35053K562SAFB2
chr77620918376209253+intron-Distal3.618635.53469K562SAFB2
chr77622680576226870+intron-Distal3.354676.35363K562SAFB2
chr77618913476189185+intron-Distal4.595516.32074HepG2HNRNPK
chr77622670676226771+intron-Distal3.175295.53952K562SAFB2
chr77618890176188928+intron-Distal3.2276910.77773K562HNRNPL
chr77618885176188916+intron-Distal3.9866225.64275HepG2HNRNPL
chr77618954076189604+intron-Distal3.7187910.52957HepG2HNRNPK
chr77621769576217732+intron-Distal3.912043.06015K562MATR3
chr77622137976221421+intron-Distal3.009925.06972HepG2HLTF
chr77619553976195589+intron-Distal4.611194.78076K562HNRNPM
chr77619165576191714+intron-Distal5.1877514.49454K562EXOSC5
chr77621740976217495+intron-Distal4.197665.59811K562LSM11
chr77618873476188785+intron-Distal3.814575.42334HepG2QKI
chr77622200776222055+intron-Distal4.119397.81859K562SAFB2
chr77624979276249841+intron-Distal3.163123.78150HepG2ILF3
chr77619197476192020+intron-Distal3.889755.79523HepG2SUGP2
chr77619573776195783+intron-Distal3.993415.53207K562HNRNPM
chr77622115276221195+intron-Distal4.908216.79841HepG2HLTF
chr77621531676215433+intron-Distal3.0898019.33292HepG2SUGP2
chr77622623776226270+intron-Distal3.097193.46712K562SAFB2
chr77619003976190084+intron-Distal3.8368418.47356HepG2HNRNPL
chr77619523276195301+intron-Distal5.079008.39510HepG2SUGP2
chr77622406476224149+intron-Distal3.272568.22279HepG2HLTF
chr77618959676189608+intron-Distal4.077104.27660K562HNRNPL
chr77620198176202090+intron-Distal3.124888.36674HepG2QKI
chr77622563876225687+intron-Distal4.794557.11415K562SAFB2
chr77622638076226456+intron-Distal3.599056.02476HepG2HLTF
chr77618958276189630+intron-Distal4.833937.16788HepG2RBFOX2
chr77619175876191804+intron-Distal3.385063.72904K562EXOSC5
chr77621725876217335+intron-Distal3.341599.02719K562HNRNPL
chr77621691076216997+intron-Distal5.5282612.47895K562MATR3
chr77618866476188730+intron-Distal4.8363927.37065HepG2HNRNPL
chr77622206776222109+intron-Distal3.759933.48705K562PPIL4
chr77619196976192025+intron-Distal5.9504012.96579HepG2HNRNPM
chr77622390576223976+intron-Distal4.010988.68660K562SAFB2
chr77621850076218552+intron-Distal4.593465.03450HepG2XRCC6
chr77618900576189076+intron-Distal3.260199.06425K562HNRNPL
chr77618872676188777+intron-Distal3.279177.98995K562HNRNPL
chr77618387976183895+intron-Distal4.035407.58805HepG2HNRNPC
chr77618873676188772+intron-Distal4.3514111.44965HepG2HNRNPL
chr77618996876190016+intron-Distal3.9721616.19572HepG2HNRNPL
chr77621348676213554+intron-Distal3.966673.66349K562LIN28B
chr77620812076208228+intron-Distal3.275923.94728HepG2SAFB
chr77618912576189180+intron-Distal4.2542917.69626HepG2HNRNPL
chr77617904976179178+intron-Distal,intron-Proximal5.031666.40925HepG2SRSF9
chr77619163276191713+intron-Distal4.278329.30950HepG2SUGP2
chr77622637876226421+intron-Distal3.080225.56198K562SAFB2
chr77618874176188779+intron-Distal3.708366.13897K562PTBP1
chr77622516376225256+intron-Distal3.637553.25970K562PPIL4
chr77622133976221436+intron-Distal3.3963812.63922K562SAFB2
chr77618323876183314+intron-Distal4.614143.41592K562XRCC6
chr77618526176185336+intron-Distal4.633987.23320K562KHDRBS1
chr77622451576224566+intron-Distal3.910276.52185HepG2HLTF
chr77622644576226504+intron-Distal4.088768.00568K562SAFB2
chr77622581976225884+intron-Distal3.226657.33834K562SAFB2
chr77620911976209179+intron-Distal3.256483.95154K562SAFB2
chr77618934476189412+intron-Distal3.949053.48223HepG2RBFOX2
chr77617888276179030+intron-Distal,intron-Proximal4.390603.34538K562DGCR8
chr77617898376179068+intron-Distal,intron-Proximal4.156064.07395K562SRSF1
chr77617902276179041+intron-Distal,intron-Proximal4.434589.72826K562RBM15
chr77617904176179070+intron-Distal,intron-Proximal4.378479.04978K562RBM15
chr77617889176178984+intron-Distal,intron-Proximal3.422564.27261HepG2GRWD1
chr77617895276179057+intron-Distal,intron-Proximal3.220265.37770HepG2SRSF1
chr77617888376178982+intron-Distal,intron-Proximal3.056404.18274K562XRCC6
chr77617893676178980+intron-Distal,intron-Proximal4.488445.44815HepG2PRPF4
chr77617887076178975+intron-Distal,intron-Proximal3.289843.54163HepG2DGCR8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC004980.7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC004980.7 is not available on ENCORE database.

  • 45 RBPs can affect the levels of AC004980.7.  








The Knockdown/knockout RNA-Seq assay for AC004980.7 is not available on ENCORE database.





45 RBPs can affect the gene expression of AC004980.7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC004980.7ENSG00000205485.964.71960109.47960-0.758401.872001.42470HepG2AKAP1
AC004980.7ENSG00000205485.970.11450109.38220-0.641602.041801.36960HepG2AKAP8L
AC004980.7ENSG00000205485.9190.0557091.510001.054306.582005.59310HepG2AUH
AC004980.7ENSG00000205485.9166.6068069.829401.254406.421505.55360HepG2BOP1
AC004980.7ENSG00000205485.9160.6476098.930600.699302.857502.20620HepG2CELF1
AC004980.7ENSG00000205485.9139.5604072.792800.938902.464901.54280HepG2DDX59
AC004980.7ENSG00000205485.9173.3904090.079300.944703.845103.12670HepG2DDX6
AC004980.7ENSG00000205485.959.58610104.15040-0.805602.527701.87640HepG2DKC1
AC004980.7ENSG00000205485.934.5397075.97530-1.137302.669401.76080HepG2EEF2
AC004980.7ENSG00000205485.9293.26780105.070401.4808014.7064013.49750HepG2ETF1
AC004980.7ENSG00000205485.995.7524059.070300.696802.052601.37830HepG2PRPF4
AC004980.7ENSG00000205485.965.13290110.87970-0.767502.707702.09640HepG2PUS1
AC004980.7ENSG00000205485.9205.6953099.186001.052206.555705.87450HepG2SRFBP1
AC004980.7ENSG00000205485.944.9257096.49290-1.102903.539703.02150HepG2SRSF1
AC004980.7ENSG00000205485.972.66900113.08060-0.637902.148201.58720HepG2SUCLG1
AC004980.7ENSG00000205485.9122.8114070.215500.806503.259202.65840HepG2TRIM56
AC004980.7ENSG00000205485.9102.3967058.299100.812502.647001.98890HepG2ZC3H8
AC004980.7ENSG00000205485.957.56820109.57110-0.928503.121202.52430K562AGGF1
AC004980.7ENSG00000205485.956.10400114.01190-1.023003.736202.97470K562AKAP8L
AC004980.7ENSG00000205485.9411.18040191.738301.1005013.4070012.08350K562DDX47
AC004980.7ENSG00000205485.974.94170122.69610-0.711202.564701.72590K562DKC1
AC004980.7ENSG00000205485.9224.55640100.989101.152806.541504.85690K562EIF3D
AC004980.7ENSG00000205485.981.6947046.153000.823702.246401.52380K562EIF3G
AC004980.7ENSG00000205485.996.1359044.036201.126303.795402.83810K562EIF4A3
AC004980.7ENSG00000205485.993.13540176.29850-0.920604.403903.31730K562FIP1L1
AC004980.7ENSG00000205485.9133.1041045.794401.539207.849906.89840K562FXR1
AC004980.7ENSG00000205485.9207.4068064.706401.6804012.1344010.95860K562HNRNPC
AC004980.7ENSG00000205485.9264.02750173.268000.607603.301102.13530K562HNRNPL
AC004980.7ENSG00000205485.9257.43140145.012700.827904.443703.24420K562HNRNPM
AC004980.7ENSG00000205485.9128.7136083.297400.627702.203901.40800K562HNRNPU
AC004980.7ENSG00000205485.964.87240121.00130-0.899303.542702.59640K562KIF1C
AC004980.7ENSG00000205485.9136.3524048.708401.485008.379306.88090K562MAGOH
AC004980.7ENSG00000205485.965.80240135.55120-1.042603.946702.82940K562MBNL1
AC004980.7ENSG00000205485.929.0380095.01100-1.710205.340403.97460K562NAA15
AC004980.7ENSG00000205485.915.3613065.53480-2.093004.427803.09740K562PABPN1
AC004980.7ENSG00000205485.9124.1286047.323801.391107.188206.15540K562PTBP1
AC004980.7ENSG00000205485.9325.85620199.116500.710504.547203.50450K562PUF60
AC004980.7ENSG00000205485.952.97900113.08120-1.093903.909303.27960K562PUS1
AC004980.7ENSG00000205485.939.29730110.17010-1.487206.236905.37180K562RBM15
AC004980.7ENSG00000205485.928.6837080.63160-1.491103.113301.45410K562RBM39
AC004980.7ENSG00000205485.993.9430047.749700.976202.294001.31990K562NELFE
AC004980.7ENSG00000205485.9220.83550116.952500.916903.746101.89410K562RPS3A
AC004980.7ENSG00000205485.983.0100033.626601.303603.117102.04700K562RPS3
AC004980.7ENSG00000205485.9173.94680108.127500.685802.960702.10860K562SYNCRIP
AC004980.7ENSG00000205485.9103.4652046.951901.139804.223403.34280K562TARDBP
AC004980.7ENSG00000205485.9231.22770152.736800.598203.110202.35000K562UPF1
AC004980.7ENSG00000205485.9282.52460135.898001.055809.842208.35560K562WDR43
AC004980.7ENSG00000205485.9190.2052061.522601.628308.280505.17260K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC004980.7 is not available on ENCORE database.





1 RBPs can affect the splicing of AC004980.7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEAC004980.7ENSG00000205485.9chr7+7624481076244980762475127624765376180780761808397625523776257299-0.424000.000200.051722includedK562EIF4G2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AC004980.7 is not avaliable on ENCORE database.