FAM120B

General Information

Gene Name       : FAM120B
Gene ID             : ENSG00000112584.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM120B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM120BENSG00000112584.1315.5613.3514.46ENCSR000AEF
HepG2FAM120BENSG00000112584.1314.2116.1615.19ENCSR985KAT
K562FAM120BENSG00000112584.1314.4014.3614.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM120B is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM120B RNA is bound by 36 proteins.  







eCLIP assay for FAM120B is not avaliable on ENCORE database.





36 proteins are bound to FAM120B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr6170715118170715230+3'-UTR4.636674.46422K562UPF1
chr6170626457170626514+5'-UTR,CDS,intron-Distal,intron-Proximal4.063405.07098K562DDX3X
chr6170639589170639640+5'-UTR,CDS,intron-Proximal4.403396.64430HepG2PPIG
chr6170615916170615965+5'-UTR,intron-Distal,intron-Proximal4.630258.44604HepG2PRPF8
chr6170639596170639683+5'-UTR,CDS,intron-Proximal4.045398.82110K562PRPF8
chr6170639611170639676+5'-UTR,CDS,intron-Proximal5.7965440.76497HepG2PRPF8
chr6170704577170704709+CDS,intron-Proximal3.788453.40453HepG2SRSF1
chr6170697505170697574+CDS4.127123.49905HepG2PPIG
chr6170704518170704624+CDS,intron-Proximal4.923115.58150K562SF3B4
chr6170626492170626583+CDS,intron-Distal4.401275.97140K562PUM2
chr6170667380170667452+CDS,intron-Proximal6.1274711.80896HepG2PRPF8
chr6170626822170626901+CDS,intron-Distal4.034557.65975HepG2BCLAF1
chr6170632211170632343+CDS,intron-Distal4.910447.92891HepG2GRWD1
chr6170626558170626641+CDS,intron-Distal3.624078.19964HepG2BCLAF1
chr6170700046170700114+CDS,intron-Proximal4.236883.56713HepG2SF3B4
chr6170628100170628182+CDS,intron-Distal5.310058.75808HepG2BCLAF1
chr6170626485170626509+CDS,intron-Distal4.450114.34038HepG2BCLAF1
chr6170627137170627188+CDS,intron-Distal3.266354.00333HepG2EIF3H
chr6170657382170657467+CDS,intron-Proximal5.9449412.94972K562PRPF8
chr6170657386170657453+CDS,intron-Proximal5.5466922.46178HepG2PRPF8
chr6170704553170704621+CDS,intron-Proximal4.503715.55733K562BUD13
chr6170704651170704710+CDS,intron-Proximal3.635576.34662HepG2PRPF8
chr6170626780170626886+CDS,intron-Distal3.059625.71803K562UCHL5
chr6170626544170626593+CDS,intron-Distal4.033015.02066HepG2EIF3H
chr6170686238170686304+intron-Distal6.2967722.10366HepG2DDX6
chr6170695252170695299+intron-Distal3.809943.65589K562SAFB2
chr6170707947170708001+intron-Distal3.881034.02152K562TBRG4
chr6170694605170694677+intron-Distal4.002139.44974HepG2HLTF
chr6170686180170686225+intron-Distal8.4327396.84880HepG2RBFOX2
chr6170686297170686305+intron-Distal8.39583154.32651HepG2RBFOX2
chr6170643631170643777+intron-Distal4.926846.49093K562TARDBP
chr6170686919170686974+intron-Distal7.4032733.45682HepG2DROSHA
chr6170686316170686401+intron-Distal4.767888.06526K562DDX6
chr6170695012170695166+intron-Distal3.841429.05342K562SAFB2
chr6170686323170686376+intron-Distal7.3629214.17368HepG2DDX6
chr6170684787170684916+intron-Distal3.064356.23022HepG2RBFOX2
chr6170677119170677187+intron-Distal3.088783.73266K562KHSRP
chr6170707935170708018+intron-Distal5.1021610.10565HepG2QKI
chr6170709141170709194+intron-Distal5.016586.32267HepG2DDX52
chr6170686353170686377+intron-Distal7.2830264.40570HepG2DROSHA
chr6170687102170687208+intron-Distal5.7643231.64548HepG2DROSHA
chr6170686194170686210+intron-Distal6.1103610.02975HepG2DDX6
chr6170680846170680957+intron-Distal3.760343.38114HepG2GRWD1
chr6170686966170687043+intron-Distal4.928705.92328K562RBFOX2
chr6170686181170686225+intron-Distal3.317774.35908HepG2STAU2
chr6170707829170707859+intron-Distal3.333803.12625HepG2QKI
chr6170686833170686878+intron-Distal6.4403332.48113HepG2DROSHA
chr6170686784170686835+intron-Distal5.3275411.08143K562RBFOX2
chr6170686317170686352+intron-Distal8.10929265.21333HepG2RBFOX2
chr6170686376170686399+intron-Distal6.7985511.68248HepG2DDX6
chr6170673636170673696+intron-Distal4.849064.82195HepG2XPO5
chr6170682012170682082+intron-Distal3.066615.40388HepG2U2AF2
chr6170686922170686991+intron-Distal3.140363.15160HepG2STAU2
chr6170709137170709207+intron-Distal6.3069713.44723HepG2QKI
chr6170686841170686873+intron-Distal9.37149143.71493HepG2RBFOX2
chr6170685989170686024+intron-Distal5.211189.21495HepG2DDX6
chr6170686974170687029+intron-Distal6.1911810.13433K562DROSHA
chr6170709138170709203+intron-Distal3.467754.37422HepG2EIF3D
chr6170685985170686040+intron-Distal5.8655829.65176HepG2DROSHA
chr6170675474170675545+intron-Distal4.134496.67731HepG2PRPF4
chr6170707139170707231+intron-Distal3.440297.73848HepG2EIF3D
chr6170685904170685920+intron-Distal5.454216.22843K562DROSHA
chr6170693195170693306+intron-Distal5.205999.55954K562SAFB2
chr6170686352170686366+intron-Distal8.81595304.39794HepG2RBFOX2
chr6170709138170709197+intron-Distal5.047746.54684K562TBRG4
chr6170675715170675773+intron-Distal3.479015.62051HepG2PRPF4
chr6170709532170709593+intron-Distal3.159576.60501HepG2EIF3D
chr6170686331170686402+intron-Distal4.7541810.41008K562RBFOX2
chr6170688909170688978+intron-Distal4.601835.89032HepG2QKI
chr6170686784170686831+intron-Distal4.223274.21991K562MTPAP
chr6170686388170686417+intron-Distal8.77787209.72140HepG2RBFOX2
chr6170675484170675621+intron-Distal4.265933.07980HepG2HNRNPM
chr6170653826170654007+intron-Distal5.048485.36996HepG2PCBP2
chr6170686225170686300+intron-Distal4.5953513.02096HepG2STAU2
chr6170706470170706547+intron-Distal4.327369.85085HepG2EIF3D
chr6170668522170668603+intron-Distal5.8046613.73392HepG2ILF3
chr6170693575170693615+intron-Distal3.919123.22483K562SAFB2
chr6170687425170687461+intron-Distal4.257867.57763HepG2DROSHA
chr6170686829170686857+intron-Distal5.9849317.31370HepG2DDX6
chr6170686787170686861+intron-Distal3.975425.86793HepG2STAU2
chr6170686366170686388+intron-Distal9.27866291.33275HepG2RBFOX2
chr6170686377170686410+intron-Distal7.0884861.60024HepG2DROSHA
chr6170686920170686989+intron-Distal9.36378138.66074HepG2RBFOX2
chr6170667168170667244+intron-Distal,intron-Proximal4.604186.49093K562TARDBP
chr6170686378170686401+intron-Distal6.6512511.80331K562DROSHA
chr6170686179170686227+intron-Distal6.5120614.91269HepG2DROSHA
chr6170686927170686974+intron-Distal5.2808110.60960K562DROSHA
chr6170686934170687042+intron-Distal5.695686.37383K562DDX6
chr6170667099170667168+intron-Distal4.228648.74918K562TARDBP
chr6170686787170686829+intron-Distal7.0545038.82604HepG2DDX6
chr6170686299170686378+intron-Distal7.7263732.12437K562DROSHA
chr6170685969170685975+intron-Distal4.399289.81562HepG2DROSHA
chr6170685577170685648+intron-Distal4.006663.57264HepG2GTF2F1
chr6170693891170693951+intron-Distal3.659703.34920HepG2HLTF
chr6170693245170693305+intron-Distal3.151914.84290HepG2HLTF
chr6170686314170686352+intron-Distal6.8695245.13283HepG2DROSHA
chr6170686317170686401+intron-Distal3.978207.59555HepG2STAU2
chr6170707941170707991+intron-Distal4.006193.99290K562DHX30
chr6170693676170693728+intron-Distal3.837513.74251K562SAFB2
chr6170686305170686317+intron-Distal7.63399147.10989HepG2RBFOX2
chr6170686835170686872+intron-Distal4.458765.03203K562RBFOX2
chr6170686989170687028+intron-Distal8.2252766.64860HepG2RBFOX2
chr6170686927170686991+intron-Distal5.2039112.45173HepG2DDX6
chr6170706097170706137+intron-Distal3.508213.51824HepG2EIF3D
chr6170686253170686297+intron-Distal8.97077400.00000HepG2RBFOX2
chr6170685952170686031+intron-Distal4.086456.88394K562RBFOX2
chr6170706952170707036+intron-Distal3.135034.66798HepG2EIF3D
chr6170686232170686296+intron-Distal6.3225610.88928K562DDX6
chr6170686974170687075+intron-Distal6.5099337.86320HepG2DROSHA
chr6170686235170686284+intron-Distal5.8462714.01891K562RBFOX2
chr6170671785170671849+intron-Distal4.853148.42193HepG2HNRNPC
chr6170686785170686871+intron-Distal7.4449022.76834K562DROSHA
chr6170686297170686314+intron-Distal6.3536028.73156HepG2DROSHA
chr6170675545170675625+intron-Distal3.794515.18989HepG2PRPF4
chr6170680211170680304+intron-Distal4.280834.07750HepG2HNRNPK
chr6170675349170675430+intron-Distal3.402894.36184HepG2PRPF4
chr6170694593170694694+intron-Distal3.300908.20017K562SAFB2
chr6170686227170686297+intron-Distal7.7738485.40074HepG2DROSHA
chr6170675490170675552+intron-Distal3.416373.66710HepG2GTF2F1
chr6170686833170686841+intron-Distal7.76608132.66463HepG2RBFOX2
chr6170686013170686035+intron-Distal7.5980144.89202HepG2RBFOX2
chr6170706369170706414+intron-Distal4.464784.95190HepG2EIF3D
chr6170646369170646420+intron-Distal5.7323512.65719K562EXOSC5
chr6170707924170708000+intron-Distal3.400293.00074HepG2EIF3D
chr6170686787170686833+intron-Distal6.3285145.29736HepG2DROSHA
chr6170686784170686857+intron-Distal6.4277810.13101K562DDX6
chr6170686232170686292+intron-Distal6.4615024.15972K562DROSHA
chr6170707086170707139+intron-Distal5.043416.72766HepG2EIF3D
chr6170709391170709450+intron-Distal4.383784.70703HepG2EIF3D
chr6170695091170695157+intron-Distal3.016555.33826HepG2HLTF
chr6170633914170634059+intron-Distal4.631306.58261K562KHSRP
chr6170686784170686833+intron-Distal8.01515400.00000HepG2RBFOX2
chr6170675489170675565+intron-Distal3.465345.03137K562GTF2F1
chr6170686225170686253+intron-Distal8.58972282.98988HepG2RBFOX2
chr6170697317170697347+intron-Proximal4.701103.56713HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM120B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM120B is not available on ENCORE database.

  • 59 RBPs can affect the levels of FAM120B.  








The Knockdown/knockout RNA-Seq assay for FAM120B is not available on ENCORE database.





59 RBPs can affect the gene expression of FAM120B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM120BENSG00000112584.9974.00700752.874300.371404.357403.62750HepG2ACO1
FAM120BENSG00000112584.91630.61300841.655100.9540011.4483010.43800HepG2AKAP1
FAM120BENSG00000112584.91279.041401026.773500.316803.506702.75050HepG2AUH
FAM120BENSG00000112584.9944.87450752.681600.328003.642102.89700HepG2CKAP4
FAM120BENSG00000112584.9600.08370891.21120-0.570604.910204.01690HepG2CPSF6
FAM120BENSG00000112584.9604.24900744.16830-0.300502.226901.31580HepG2YBX3
FAM120BENSG00000112584.91213.36930902.245800.427305.168904.33960HepG2CELF1
FAM120BENSG00000112584.9788.92460970.22250-0.298403.308402.51030HepG2DAZAP1
FAM120BENSG00000112584.91019.05200806.234100.337901.975901.43880HepG2DDX3X
FAM120BENSG00000112584.9860.15000655.876800.391102.085501.40450HepG2DDX55
FAM120BENSG00000112584.9919.82590661.771500.474903.424502.40610HepG2EEF2
FAM120BENSG00000112584.91081.69460735.762400.555904.281603.49070HepG2EIF4A3
FAM120BENSG00000112584.9609.920701178.86280-0.9507021.9251020.50990HepG2ETF1
FAM120BENSG00000112584.91338.07820907.165900.560604.779703.79050HepG2FIP1L1
FAM120BENSG00000112584.9444.37420688.65240-0.632004.746303.88580HepG2G3BP1
FAM120BENSG00000112584.9433.79470737.68880-0.766008.100907.07950HepG2HNRNPA1
FAM120BENSG00000112584.9526.89640697.35580-0.404402.508301.84130HepG2HNRNPK
FAM120BENSG00000112584.91257.35870903.809500.476202.948501.65990HepG2KRR1
FAM120BENSG00000112584.91113.99940742.639500.584905.094404.21300HepG2MAGOH
FAM120BENSG00000112584.91224.40090746.791600.713206.651605.70480HepG2MATR3
FAM120BENSG00000112584.9962.42720806.821900.254302.146501.39290HepG2PARN
FAM120BENSG00000112584.91160.25430974.843100.251102.551001.97640HepG2PUM1
FAM120BENSG00000112584.91568.30850985.313300.6705012.7250011.77640HepG2RBM22
FAM120BENSG00000112584.91028.92040841.336500.290302.489201.97140HepG2NELFE
FAM120BENSG00000112584.9935.943601132.32690-0.274801.907101.32810HepG2RPLP0
FAM120BENSG00000112584.9725.04040522.732000.471903.818303.10680HepG2RPS19
FAM120BENSG00000112584.91563.207401061.802900.557903.370202.50320HepG2SNRNP70
FAM120BENSG00000112584.91319.115801112.879100.245202.572602.08280HepG2SRFBP1
FAM120BENSG00000112584.91160.32950966.249300.264002.685102.17730HepG2SSB
FAM120BENSG00000112584.9743.36500939.70090-0.338102.150901.49980HepG2TARDBP
FAM120BENSG00000112584.9263.49370437.61980-0.731904.657303.41280HepG2TFIP11
FAM120BENSG00000112584.9579.02080791.99830-0.451904.173403.58670HepG2TIAL1
FAM120BENSG00000112584.9479.23480749.39010-0.645008.589907.51570HepG2ZC3H8
FAM120BENSG00000112584.91301.19020965.188200.430807.421306.63770HepG2ZNF622
FAM120BENSG00000112584.9714.344901125.58570-0.656008.521307.59860K562AGGF1
FAM120BENSG00000112584.9752.706801171.22830-0.637907.265406.16160K562AKAP8L
FAM120BENSG00000112584.9721.83270928.76250-0.363602.826702.03620K562CPSF6
FAM120BENSG00000112584.9565.16380770.50540-0.447104.691702.96000K562DDX27
FAM120BENSG00000112584.91119.573401522.21050-0.443206.776405.82170K562DDX47
FAM120BENSG00000112584.9316.57610544.20790-0.781604.156502.89810K562EIF3A
FAM120BENSG00000112584.9558.05060824.69370-0.563503.953202.68880K562EIF3D
FAM120BENSG00000112584.9523.23750767.33330-0.552405.967604.81140K562EIF3G
FAM120BENSG00000112584.91057.73350725.735200.543405.459204.30900K562EIF4A3
FAM120BENSG00000112584.9933.74520754.731600.307002.590402.00090K562FXR1
FAM120BENSG00000112584.9603.31950841.36050-0.479804.336302.51260K562G3BP1
FAM120BENSG00000112584.9491.69190972.67290-0.9842012.6449010.60990K562HNRNPA1
FAM120BENSG00000112584.9742.14150964.76070-0.378502.932202.31990K562HNRNPC
FAM120BENSG00000112584.91126.384501535.13070-0.446704.074803.11530K562HSPD1
FAM120BENSG00000112584.9936.388101242.94730-0.408603.338502.42280K562KIF1C
FAM120BENSG00000112584.9680.57990975.98550-0.520103.163402.20860K562NAA15
FAM120BENSG00000112584.9668.09650991.03830-0.568902.206901.34310K562PABPN1
FAM120BENSG00000112584.9647.46000822.86340-0.345902.239101.36380K562PCBP2
FAM120BENSG00000112584.91749.285501129.219900.631306.467605.19500K562PCBP3
FAM120BENSG00000112584.91430.53790866.168900.7237011.9405010.33460K562POLR2G
FAM120BENSG00000112584.91036.064901285.46050-0.311202.172801.44990K562PPIG
FAM120BENSG00000112584.9554.06150749.62980-0.436102.916702.14780K562PRPF8
FAM120BENSG00000112584.9592.20160864.99790-0.546604.933503.67880K562PSIP1
FAM120BENSG00000112584.92575.439601847.963000.478805.407804.27010K562PUF60
FAM120BENSG00000112584.9562.805501161.49920-1.0453015.9060014.64480K562PUS1
FAM120BENSG00000112584.9724.041501131.73740-0.644408.270807.27390K562RBM15
FAM120BENSG00000112584.91163.14660906.635700.359302.530801.49050K562NELFE
FAM120BENSG00000112584.9537.57370763.50650-0.506203.303002.40780K562RPS19
FAM120BENSG00000112584.9615.02590831.98980-0.435902.839301.89080K562TIAL1
FAM120BENSG00000112584.9699.48700883.82150-0.337502.189901.36310K562TRIM56
FAM120BENSG00000112584.9891.62400690.409300.368903.138802.28400K562U2AF2
FAM120BENSG00000112584.91015.574501231.92630-0.278603.086502.19440K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM120B is not available on ENCORE database.





9 RBPs can affect the splicing of FAM120B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFAM120BENSG00000112584.9chr6+1706997311706997731706973741706975811707001001707002090.131000.000010.00047includedHepG2U2AF1
SEFAM120BENSG00000112584.9chr6+170639536170639638170632166170632347170657238170657411-0.084000.011190.08876excludedK562AQR
SEFAM120BENSG00000112584.9chr6+170667313170667406170657238170657411170697374170697581-0.294000.000370.00737excludedK562PUS1
SEFAM120BENSG00000112584.9chr6+170667313170667406170657238170657411170697374170697581-0.216000.002170.05584excludedHepG2SF3A3
SEFAM120BENSG00000112584.9chr6+170639536170639638170632166170632347170657238170657411-0.195000.001280.05613excludedHepG2SF3B4
A5SSFAM120BENSG00000112584.9chr6+1706673131706675081706673131706674061706973741706975810.298000.000170.00896longerK562PUS1
A5SSFAM120BENSG00000112584.9chr6+1706673131706675081706673131706674061706973741706975810.256000.000260.01871longerK562SRSF1
MXEFAM120BENSG00000112584.9chr6+170639536170639638170657238170657411170632166170632347170667313170667406-0.309000.000480.038292includedHepG2IGF2BP3
MXEFAM120BENSG00000112584.9chr6+1706572381706574111706673131706674061706395361706396381706973741706975810.284000.001230.023931includedK562PUS1
MXEFAM120BENSG00000112584.9chr6+1706395361706396381706572381706574111706321661706323471706673131706674060.204000.003270.047781includedK562SRSF1
MXEFAM120BENSG00000112584.9chr6+1706673131706674061706973741706975811706395361706396381707001001707002090.110000.014110.083411includedK562AQR
MXEFAM120BENSG00000112584.9chr6+1706572381706574111706973741706975811706321661706323471707001001707002090.090000.013790.081871includedK562AQR
MXEFAM120BENSG00000112584.9chr6+170700100170700209170704574170704667170697374170697581170713637170713689-0.161000.003820.028672includedK562AQR
MXEFAM120BENSG00000112584.9chr6+1706973741706975811707001001707002091706572381706574111707045741707046670.115000.001600.051001includedHepG2SF3A3
MXEFAM120BENSG00000112584.9chr6+170639536170639638170657238170657411170632166170632347170667313170667406-0.241000.000830.053362includedHepG2AKAP1
MXEFAM120BENSG00000112584.9chr6+170639536170639638170657238170657411170632166170632347170667313170667406-0.257000.001470.049742includedHepG2NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAM120B is not avaliable on ENCORE database.