SENP5

General Information

Gene Name       : SENP5
Gene ID             : ENSG00000119231.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SENP5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SENP5ENSG00000119231.1015.7611.4413.60ENCSR000AEF
HepG2SENP5ENSG00000119231.107.5910.549.06ENCSR985KAT
K562SENP5ENSG00000119231.1017.1817.4817.33ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SENP5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SENP5 RNA is bound by 25 proteins.  







eCLIP assay for SENP5 is not avaliable on ENCORE database.





25 proteins are bound to SENP5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3196661390196661475+3'-UTR4.884935.53111K562LSM11
chr3196657683196657831+3'-UTR,CDS,intron-Proximal3.024786.69553HepG2PPIG
chr3196626536196626645+3'-UTR,CDS,intron-Proximal3.6537610.26109HepG2BCLAF1
chr3196659902196659950+3'-UTR3.283765.59934K562FAM120A
chr3196657768196657841+3'-UTR,CDS,intron-Proximal3.970998.16229HepG2GRWD1
chr3196659631196659683+3'-UTR3.421215.70741K562HNRNPC
chr3196657683196657851+3'-UTR,CDS,intron-Proximal3.312559.81234K562ZNF622
chr3196659620196659631+3'-UTR3.996874.29624K562HNRNPC
chr3196594780196594945+5'-UTR,intron-Proximal3.820427.93865HepG2NCBP2
chr3196594799196594912+5'-UTR4.733265.67784K562FMR1
chr3196594783196594852+5'-UTR4.449306.83552HepG2DDX3X
chr3196594852196594936+5'-UTR3.174025.82217HepG2DDX3X
chr3196594787196594943+5'-UTR4.5181419.29649K562DDX3X
chr3196650421196650505+CDS,intron-Distal,intron-Proximal3.223463.20886K562PRPF8
chr3196613524196613601+CDS,intron-Distal,intron-Proximal4.072513.56873HepG2PRPF8
chr3196626832196626934+CDS,intron-Proximal4.003953.79347HepG2GRWD1
chr3196627243196627283+CDS4.150847.09561HepG2BCLAF1
chr3196630403196630423+CDS,intron-Proximal4.842125.68196HepG2BCLAF1
chr3196630423196630475+CDS4.602548.41475HepG2BCLAF1
chr3196612155196612189+CDS,intron-Distal3.7287710.17756K562YBX3
chr3196657706196657752+CDS3.644584.40383K562UCHL5
chr3196656547196656640+CDS,intron-Proximal3.625854.88100K562AQR
chr3196612107196612149+CDS,intron-Distal4.630114.78529HepG2BCLAF1
chr3196626788196626822+CDS,intron-Proximal4.933204.39274K562GPKOW
chr3196626794196626862+CDS,intron-Proximal4.652308.41475HepG2BCLAF1
chr3196626885196626930+CDS3.788664.51739HepG2BCLAF1
chr3196645852196645912+intron-Distal4.109674.72697K562SAFB2
chr3196642642196642688+intron-Distal3.016283.26524K562SAFB2
chr3196634846196634905+intron-Distal3.861167.60069K562SAFB2
chr3196653384196653429+intron-Distal3.743603.08243K562ILF3
chr3196642811196642925+intron-Distal3.765163.28742K562HLTF
chr3196652245196652339+intron-Distal3.904803.41442HepG2HNRNPK
chr3196641895196641950+intron-Distal3.344764.31726K562SLTM
chr3196630507196630611+intron-Distal,intron-Proximal3.010874.20465K562KHSRP
chr3196642322196642358+intron-Distal3.479163.84914K562SLTM
chr3196642184196642254+intron-Distal3.689203.25633K562PPIL4
chr3196641750196641833+intron-Distal3.425803.86112K562SAFB2
chr3196641258196641335+intron-Distal4.150734.79322K562SAFB2
chr3196646033196646128+intron-Distal4.592996.91685K562SAFB2
chr3196644728196644812+intron-Distal4.435706.25977K562SAFB2
chr3196634907196634982+intron-Distal3.022124.73846K562SAFB2
chr3196642172196642280+intron-Distal4.930446.91685K562SAFB2
chr3196646721196646794+intron-Distal3.309943.67498K562SAFB2
chr3196641530196641579+intron-Distal4.072674.56270K562SAFB2
chr3196644133196644332+intron-Distal5.4680810.74012K562SAFB2
chr3196645279196645327+intron-Distal4.080223.74251K562SAFB2
chr3196644722196644788+intron-Distal3.518823.61820HepG2HLTF
chr3196645784196645836+intron-Distal3.687733.19638K562SAFB2
chr3196635385196635438+intron-Distal4.582107.10192K562SAFB2
chr3196638986196639027+intron-Distal3.883053.24150HepG2HLTF
chr3196642331196642370+intron-Distal3.691423.10466K562SAFB2
chr3196644618196644720+intron-Distal4.806815.84943K562SAFB2
chr3196650179196650255+intron-Distal,intron-Proximal4.651574.12401HepG2U2AF2
chr3196635388196635448+intron-Distal3.347643.60615K562SLTM
chr3196639587196639627+intron-Distal3.714953.43228K562SAFB2
chr3196645799196645881+intron-Distal4.264375.08132K562KHDRBS1
chr3196595024196595097+intron-Distal,intron-Proximal4.255857.46637HepG2XPO5
chr3196642035196642087+intron-Distal3.789904.49353K562SLTM
chr3196634826196634941+intron-Distal3.211336.77895HepG2HLTF
chr3196642091196642305+intron-Distal3.9710811.19696HepG2HLTF
chr3196635341196635385+intron-Distal3.992434.16015K562SAFB2
chr3196641885196641961+intron-Distal3.510394.70071K562SAFB2
chr3196639861196639932+intron-Distal3.714953.43228K562SAFB2
chr3196642145196642235+intron-Distal3.617726.52218K562SLTM
chr3196639341196639424+intron-Distal3.878793.90264K562PPIL4
chr3196633854196633944+intron-Distal3.984293.70663K562PPIL4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SENP5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SENP5 is not available on ENCORE database.

  • 49 RBPs can affect the levels of SENP5.  








The Knockdown/knockout RNA-Seq assay for SENP5 is not available on ENCORE database.





49 RBPs can affect the gene expression of SENP5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SENP5ENSG00000119231.6634.35580954.91370-0.590108.752407.48630HepG2AKAP8L
SENP5ENSG00000119231.6710.898001117.37260-0.652406.260105.10060HepG2ASCC1
SENP5ENSG00000119231.61074.76310708.606400.600906.305605.44350HepG2BOP1
SENP5ENSG00000119231.6720.387001061.57740-0.559404.872703.86180HepG2CIRBP
SENP5ENSG00000119231.6973.582401204.78190-0.307402.801802.15520HepG2CELF1
SENP5ENSG00000119231.6733.90330879.01630-0.260302.492701.69780HepG2DDX19B
SENP5ENSG00000119231.6596.25340744.34800-0.320102.500701.82810HepG2DNAJC21
SENP5ENSG00000119231.6615.14270737.76710-0.262202.223901.62700HepG2DNAJC2
SENP5ENSG00000119231.6424.92030673.19520-0.663805.190503.96250HepG2EEF2
SENP5ENSG00000119231.6704.40160928.76090-0.398903.298102.38700HepG2EWSR1
SENP5ENSG00000119231.6457.03540737.43890-0.690205.440704.56340HepG2GPKOW
SENP5ENSG00000119231.6584.70880751.47900-0.362002.359901.75930HepG2HNRNPA1
SENP5ENSG00000119231.6601.32130835.87880-0.475203.746302.94920HepG2HNRNPC
SENP5ENSG00000119231.6537.11140830.35260-0.628509.519908.44830HepG2HNRNPU
SENP5ENSG00000119231.6765.373801131.43790-0.563903.876802.41630HepG2HSPD1
SENP5ENSG00000119231.6697.98610848.17820-0.281202.831402.09170HepG2ILF2
SENP5ENSG00000119231.6948.450901198.18970-0.337201.888701.36200HepG2MATR3
SENP5ENSG00000119231.6676.29770821.91030-0.281302.301801.52320HepG2PARN
SENP5ENSG00000119231.61271.791301074.523500.243102.287101.72480HepG2PCBP1
SENP5ENSG00000119231.6484.12210740.60870-0.613307.434306.26850HepG2PPIL4
SENP5ENSG00000119231.6843.47250701.180800.266502.072201.39470HepG2PRPF4
SENP5ENSG00000119231.6934.822701301.62620-0.477608.234707.32520HepG2PUM1
SENP5ENSG00000119231.6905.369401300.64040-0.522606.228005.23550HepG2PUM2
SENP5ENSG00000119231.6831.146201324.24020-0.6720011.7444010.83080HepG2RBM22
SENP5ENSG00000119231.61604.007601074.688700.577707.641206.56890HepG2RBM25
SENP5ENSG00000119231.6927.650801216.81060-0.391504.737904.06440HepG2NELFE
SENP5ENSG00000119231.6346.91550531.75550-0.616204.930104.13650HepG2RPS19
SENP5ENSG00000119231.6833.867401120.36390-0.426102.375701.63110HepG2RPS3A
SENP5ENSG00000119231.6617.33410739.46730-0.260402.056301.48760HepG2SAFB2
SENP5ENSG00000119231.61051.97450696.575600.594605.969504.96640HepG2SF3B1
SENP5ENSG00000119231.6495.24080862.34660-0.8001015.8363014.48960HepG2SMN1
SENP5ENSG00000119231.61756.787001495.648100.232102.449001.96740HepG2SRFBP1
SENP5ENSG00000119231.6934.015701188.17800-0.347204.055703.51020HepG2SRSF1
SENP5ENSG00000119231.6926.785501210.67250-0.385504.494003.73030HepG2SRSF5
SENP5ENSG00000119231.61140.68920966.639600.238802.216601.71110HepG2SRSF9
SENP5ENSG00000119231.61075.829701376.81030-0.355904.672803.90200HepG2SUCLG1
SENP5ENSG00000119231.6498.96030639.14700-0.357202.418701.53650HepG2SUPT6H
SENP5ENSG00000119231.61250.44460981.331800.349503.166602.27730HepG2TIA1
SENP5ENSG00000119231.6617.67520814.05470-0.398304.294303.62220HepG2TRIM56
SENP5ENSG00000119231.61032.95900809.640900.351302.402201.81330HepG2U2AF1
SENP5ENSG00000119231.6614.43720425.823300.528904.063403.14350HepG2UCHL5
SENP5ENSG00000119231.63743.425002592.587600.529906.754405.90240K562AQR
SENP5ENSG00000119231.6496.98950674.64800-0.440902.930301.84050K562CCAR1
SENP5ENSG00000119231.6899.037401137.62410-0.339603.063001.94670K562CSTF2
SENP5ENSG00000119231.62586.147802226.604400.215902.483401.86100K562DDX47
SENP5ENSG00000119231.61706.489002345.25800-0.458705.504204.43540K562GRSF1
SENP5ENSG00000119231.61584.956501910.26200-0.269302.709401.82580K562HNRNPU
SENP5ENSG00000119231.61802.207502401.39660-0.414104.085703.12520K562HSPD1
SENP5ENSG00000119231.6671.417201219.30420-0.860804.670503.29110K562PABPN1
SENP5ENSG00000119231.61517.188502010.73340-0.406303.720902.74800K562PPIG
SENP5ENSG00000119231.62494.483201960.466600.347403.073802.50660K562PUS1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SENP5 is not available on ENCORE database.





16 RBPs can affect the splicing of SENP5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESENP5ENSG00000119231.6chr3+1966546661966547501966502841966504221966565031966565540.184000.000530.01244includedK562SRSF1
SESENP5ENSG00000119231.6chr3+196612021196613565196594726196594944196626536196626642-0.268000.000810.01750excludedK562SRSF1
SESENP5ENSG00000119231.6chr3+196627235196627283196626909196626933196630403196630481-0.121000.000470.01134excludedK562SF3B4
SESENP5ENSG00000119231.6chr3+196612021196613565196594726196594944196626536196626642-0.289000.000040.00115excludedHepG2U2AF1
SESENP5ENSG00000119231.6chr3+196654666196654750196630403196630481196656503196656554-0.357000.000460.01713excludedK562AKAP8L
SESENP5ENSG00000119231.6chr3+196612021196613565196594726196594944196626536196626642-0.390000.000000.00000excludedHepG2U2AF2
SESENP5ENSG00000119231.6chr3+196650284196650422196630403196630481196654666196654750-0.210000.000030.00056excludedK562AQR
SESENP5ENSG00000119231.6chr3+1966546661966547501966304031966304811966565031966565540.303000.000930.03698includedK562FXR1
SESENP5ENSG00000119231.6chr3+196654666196654750196630403196630481196656503196656554-0.664000.000000.00000excludedK562PUS1
SESENP5ENSG00000119231.6chr3+196654666196654750196650284196650422196656503196656554-0.349000.000190.01413excludedK562EFTUD2
SESENP5ENSG00000119231.6chr3+196654666196654750196630403196630481196656503196656554-0.290000.006160.09472excludedK562U2AF1
SESENP5ENSG00000119231.6chr3+196612021196613565196594726196594944196626536196626642-0.325000.000090.00436excludedHepG2SF3A3
SESENP5ENSG00000119231.6chr3+196654666196654750196650195196650422196656503196656554-0.355000.002310.03929excludedK562U2AF2
SESENP5ENSG00000119231.6chr3+196654666196654750196630403196630481196656503196656554-0.409000.000000.00039excludedK562HNRNPU
SESENP5ENSG00000119231.6chr3+196654666196654750196630403196630481196656503196656554-0.464000.000000.00003excludedK562RBM15
SESENP5ENSG00000119231.6chr3+196654666196654750196630403196630481196656503196656554-0.648000.000000.00000excludedK562AGGF1
SESENP5ENSG00000119231.6chr3+196612021196613565196594726196594944196626536196626642-0.185000.000100.00656excludedK562SF3B1
SESENP5ENSG00000119231.6chr3+196654666196654750196630403196630481196656503196656554-0.354000.000400.02280excludedK562HNRNPK
SESENP5ENSG00000119231.6chr3+196654637196654750196630403196630481196656503196656554-0.369000.000390.06621excludedK562NPM1
A3SSSENP5ENSG00000119231.6chr3+1966576571966578391966576831966578391966565031966565540.074000.000500.00372longerK562AQR
A3SSSENP5ENSG00000119231.6chr3+1966501951966504221966502841966504221966303461966304810.095000.000190.00159longerK562AQR
MXESENP5ENSG00000119231.6chr3+1966501951966504221966546661966547501966304031966304811966565031966565540.315000.002520.089761includedK562SF3B1
MXESENP5ENSG00000119231.6chr3+1966501951966504221966546661966547501966304031966304811966565031966565540.154000.001030.008321includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SENP5 is not avaliable on ENCORE database.