RP1-283E3.8

General Information

Gene Name : RP1-283E3.8
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP1-283E3.8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP1-283E3.8 is not avaliable on ENCORE database.

Proteins bound to RNA

RP1-283E3.8 RNA is bound by 19 proteins.

CanvasJS.com

eCLIP assay for RP1-283E3.8 is not avaliable on ENCORE database.

19 proteins are bound to RP1-283E3.8 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	1650803	1650884	-	CDS,intron-Distal	4.59520	28.09146	K562	UCHL5
chr1	1635224	1635271	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.96173	21.52046	HepG2	PRPF8
chr1	1647757	1647888	-	CDS,intron-Distal,intron-Proximal	4.60335	20.41928	K562	UCHL5
chr1	1636330	1636456	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.23698	16.40617	K562	UCHL5
chr1	1653084	1653153	-	CDS,intron-Distal,intron-Proximal	5.82431	13.76350	K562	ZNF622
chr1	1650760	1650852	-	CDS,intron-Distal,intron-Proximal	4.04482	13.59989	K562	ZNF622
chr1	1650852	1650897	-	CDS,intron-Distal,intron-Proximal	4.10947	13.18228	K562	ZNF622
chr1	1635940	1635979	-	intron-Distal,intron-Proximal	3.81634	13.02279	HepG2	PRPF8
chr1	1635979	1635990	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90430	12.22234	HepG2	PRPF8
chr1	1653076	1653150	-	CDS,intron-Distal,intron-Proximal	4.82920	11.46466	K562	UCHL5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 81 entries

eCLIP assay for RP1-283E3.8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP1-283E3.8 is not available on ENCORE database.
56 RBPs can affect the levels of RP1-283E3.8.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RP1-283E3.8 is not available on ENCORE database.

56 RBPs can affect the gene expression of RP1-283E3.8 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP1-283E3.8	ENSG00000268575.1	170.44670	601.23390	-1.81860	27.18670	25.47740	K562	PUS1
RP1-283E3.8	ENSG00000268575.1	221.20760	582.68170	-1.39730	23.24780	21.71570	K562	AGGF1
RP1-283E3.8	ENSG00000268575.1	510.03700	176.73630	1.52890	20.54780	18.99890	K562	HNRNPC
RP1-283E3.8	ENSG00000268575.1	232.47650	585.86580	-1.33350	18.64680	17.07020	K562	RBM15
RP1-283E3.8	ENSG00000268575.1	345.90610	720.79820	-1.05920	14.42450	12.10100	K562	MBNL1
RP1-283E3.8	ENSG00000268575.1	345.10750	652.38220	-0.91870	12.84600	10.63870	K562	DKC1
RP1-283E3.8	ENSG00000268575.1	262.50430	90.61010	1.53450	11.47650	10.31930	HepG2	EIF2S1
RP1-283E3.8	ENSG00000268575.1	260.53090	93.72400	1.47490	11.27610	9.97770	HepG2	G3BP1
RP1-283E3.8	ENSG00000268575.1	315.24530	606.31580	-0.94360	9.71610	8.39830	K562	AKAP8L
RP1-283E3.8	ENSG00000268575.1	254.99900	101.08290	1.33490	9.16530	7.98260	HepG2	MAGOH
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 59 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP1-283E3.8 is not available on ENCORE database.

31 RBPs can affect the splicing of RP1-283E3.8 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1643702	1643839	1640917	1641079	1647784	1647917	-0.34500	0.00000	excluded	K562	SF3B4
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1654026	1654073	1653034	1653150	1654146	1654270	-0.14300	0.00015	excluded	K562	SF3B4
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1654026	1654073	1653034	1653150	1654146	1654270	-0.11500	0.00005	excluded	HepG2	U2AF1
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1643702	1643839	1640917	1641079	1647784	1647912	-0.15900	0.00047	excluded	K562	XRCC6
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1654026	1654073	1653034	1653150	1654146	1654270	-0.19100	0.00000	excluded	HepG2	U2AF2
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1654026	1654073	1652942	1653150	1654146	1654270	-0.12700	0.00004	excluded	K562	AQR
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1643702	1643839	1640956	1641079	1647784	1647917	-0.34100	0.00000	excluded	K562	AQR
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1643702	1643866	1640956	1641079	1647784	1647917	-0.26600	0.00553	excluded	K562	BUD13
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1654026	1654073	1653034	1653150	1654146	1654270	-0.14900	0.00010	excluded	K562	U2AF1
SE	RP1-283E3.8	ENSG00000268575.1	chr1	-	1654026	1654073	1653034	1653150	1654146	1654270	-0.17800	0.00000	excluded	K562	U2AF2

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP1-283E3.8

General Information

Functions

Localization

Domains (AlphaFold: RP1-283E3.8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP1-283E3.8 is not avaliable on ENCORE database.

19 proteins are bound to RP1-283E3.8 RNA:

eCLIP assay for RP1-283E3.8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP1-283E3.8 is not available on ENCORE database.

56 RBPs can affect the gene expression of RP1-283E3.8 :

The Knockdown/knockout RNA-Seq assay for RP1-283E3.8 is not available on ENCORE database.

31 RBPs can affect the splicing of RP1-283E3.8 :

The Knockdown/knockout RNA-Seq assay for RP1-283E3.8 is not avaliable on ENCORE database.