AC096559.1

General Information

Gene Name : AC096559.1
Gene ID : ENSG00000223360.1
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AC096559.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Experiment ID
Gm12878	AC096559.1	ENSG00000223360.1	ENCSR000AEF
HepG2	AC096559.1	ENSG00000223360.1	ENCSR985KAT
K562	AC096559.1	ENSG00000223360.1	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AC096559.1 is not avaliable on ENCORE database.

Proteins bound to RNA

AC096559.1 RNA is bound by 12 proteins.

eCLIP assay for AC096559.1 is not avaliable on ENCORE database.

12 proteins are bound to AC096559.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	12702873	12702971	+	intron-Distal	3.11172	3.95154	K562	SAFB2
chr2	12498106	12498180	+	intron-Distal	4.26559	3.57189	K562	ILF3
chr2	12535029	12535100	+	intron-Distal	4.28986	3.42734	K562	PTBP1
chr2	12530822	12530892	+	intron-Distal	4.59718	5.57532	K562	HNRNPM
chr2	12476568	12476625	+	intron-Distal	3.71138	3.19638	K562	SAFB2
chr2	12563850	12563935	+	intron-Distal	4.12594	3.01321	K562	LSM11
chr2	12475288	12475365	+	intron-Distal	4.15218	3.43228	K562	SAFB2
chr2	12535201	12535262	+	intron-Distal	3.72864	3.08314	K562	TARDBP
chr2	12482850	12482949	+	intron-Distal	3.86116	3.50894	K562	SAFB2
chr2	12566149	12566202	+	intron-Distal	5.43469	7.55693	K562	EIF4G2
chr2	12490820	12490870	+	intron-Distal	3.84647	3.12651	K562	SAFB2
chr2	12577358	12577439	+	intron-Distal	4.35261	3.87294	K562	TARDBP
chr2	12464567	12464636	+	intron-Distal	3.27841	3.44195	K562	TARDBP
chr2	12566671	12566758	+	intron-Distal	3.61242	4.90204	K562	TARDBP
chr2	12607571	12607629	+	intron-Distal	5.68556	9.44534	K562	PTBP1
chr2	12491155	12491227	+	intron-Distal	4.75014	7.76000	K562	SAFB2
chr2	12489852	12489913	+	intron-Distal	3.93702	3.86679	K562	SAFB2
chr2	12537439	12537538	+	intron-Distal	6.22056	10.62660	K562	QKI
chr2	12489297	12489376	+	intron-Distal	4.17654	3.74251	K562	SAFB2
chr2	12471576	12471628	+	intron-Distal	3.79015	3.50894	K562	SAFB2
chr2	12492186	12492254	+	intron-Distal	4.33901	4.58306	K562	SAFB2
chr2	12471230	12471272	+	intron-Distal	3.60553	3.01412	K562	SAFB2
chr2	12467010	12467081	+	intron-Distal	4.61115	4.36078	K562	GTF2F1
chr2	12607189	12607229	+	intron-Distal	5.47470	17.49354	K562	PTBP1
chr2	12491265	12491337	+	intron-Distal	3.02618	3.06830	K562	SAFB2
chr2	12492507	12492615	+	intron-Distal	5.29726	10.97454	K562	HNRNPL
chr2	12577187	12577285	+	intron-Distal	4.69119	6.49093	K562	TARDBP
chr2	12489926	12489977	+	intron-Distal	3.80994	3.65589	K562	SAFB2
chr2	12614650	12614685	+	intron-Distal	5.28986	7.41017	K562	PTBP1
chr2	12477991	12478131	+	intron-Distal	3.87665	3.31097	K562	SLTM
chr2	12566322	12566395	+	intron-Distal	3.83403	3.12825	K562	EIF4G2
chr2	12530714	12530822	+	intron-Distal	5.31349	9.21000	K562	HNRNPM
chr2	12474856	12474932	+	intron-Distal	3.24118	3.86112	K562	SAFB2
chr2	12471032	12471099	+	intron-Distal	3.09929	3.26524	K562	SAFB2
chr2	12614455	12614559	+	intron-Distal	5.40747	17.09879	K562	PTBP1
chr2	12704898	12704970	+	intron-Distal	3.60967	3.10466	K562	SAFB2
chr2	12466689	12466775	+	intron-Distal	4.00065	4.24993	K562	HNRNPL
chr2	12487352	12487534	+	intron-Distal	3.16814	6.12546	K562	SAFB2
chr2	12478055	12478125	+	intron-Distal	3.14780	3.55860	K562	SAFB2
chr2	12423444	12423556	+	intron-Distal	3.08097	3.70419	K562	KHDRBS1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for AC096559.1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for AC096559.1 is not available on ENCORE database.
21 RBPs can affect the levels of AC096559.1.

The Knockdown/knockout RNA-Seq assay for AC096559.1 is not available on ENCORE database.

21 RBPs can affect the gene expression of AC096559.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AC096559.1	ENSG00000224184.1	12.15210	0.00000	99999.99990	3.35700	2.82150	HepG2	SRFBP1
AC096559.1	ENSG00000224184.1	13.15980	90.16280	-2.77640	11.53490	10.47050	K562	AGGF1
AC096559.1	ENSG00000224184.1	34.47510	99.06420	-1.52280	6.33770	4.69550	K562	AKAP8
AC096559.1	ENSG00000224184.1	30.76440	93.81580	-1.60860	6.14870	5.14880	K562	AKAP8L
AC096559.1	ENSG00000224184.1	49.02430	98.43020	-1.00560	3.59360	2.54100	K562	ATP5C1
AC096559.1	ENSG00000224184.1	62.13330	107.75840	-0.79440	2.75580	1.58380	K562	CCDC124
AC096559.1	ENSG00000224184.1	46.16700	100.96960	-1.12900	4.35670	3.22280	K562	DKC1
AC096559.1	ENSG00000224184.1	84.34210	46.88650	0.84700	2.32620	1.65830	K562	EIF2S2
AC096559.1	ENSG00000224184.1	82.41960	40.86060	1.01220	2.67250	1.77390	K562	FTO
AC096559.1	ENSG00000224184.1	42.21650	99.57160	-1.23790	4.24650	3.19320	K562	KIF1C
AC096559.1	ENSG00000224184.1	43.78200	95.30670	-1.12220	3.57980	2.30650	K562	MAK16
AC096559.1	ENSG00000224184.1	47.56320	111.54400	-1.22970	4.74060	3.48600	K562	MBNL1
AC096559.1	ENSG00000224184.1	92.34800	42.31180	1.12590	3.72220	2.79470	K562	MTPAP
AC096559.1	ENSG00000224184.1	22.41730	78.18340	-1.80220	4.89320	3.61080	K562	NAA15
AC096559.1	ENSG00000224184.1	14.90670	68.15080	-2.19280	2.98330	1.94470	K562	PABPN1
AC096559.1	ENSG00000224184.1	28.57820	93.05900	-1.70320	5.97810	5.21770	K562	PUS1
AC096559.1	ENSG00000224184.1	27.44100	90.65580	-1.72410	6.50040	5.61700	K562	RBM15
AC096559.1	ENSG00000224184.1	89.61500	46.38450	0.95000	2.91300	2.07920	K562	SF3A3
AC096559.1	ENSG00000224184.1	93.35030	48.26200	0.95170	2.89070	1.69350	K562	SRSF7
AC096559.1	ENSG00000224184.1	114.58970	49.85690	1.20050	5.03490	4.09650	K562	UPF1
AC096559.1	ENSG00000224184.1	37.25050	94.33240	-1.34050	3.80430	2.21040	K562	UTP18
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AC096559.1

General Information

Functions

Localization

Domains (AlphaFold: AC096559.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AC096559.1 is not avaliable on ENCORE database.

12 proteins are bound to AC096559.1 RNA:

eCLIP assay for AC096559.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AC096559.1 is not available on ENCORE database.

21 RBPs can affect the gene expression of AC096559.1 :

The Knockdown/knockout RNA-Seq assay for AC096559.1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of AC096559.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AC096559.1 is not avaliable on ENCORE database.