RP5-964N17.1

General Information

Gene Name       : RP5-964N17.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP5-964N17.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP5-964N17.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP5-964N17.1 RNA is bound by 14 proteins.  







eCLIP assay for RP5-964N17.1 is not avaliable on ENCORE database.





14 proteins are bound to RP5-964N17.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX113136929113136996-intron-Distal3.422473.55860K562SAFB2
chrX112897454112897620-intron-Distal4.385566.64835K562QKI
chrX113135998113136102-intron-Distal5.5174510.53786K562SAFB2
chrX113170205113170247-intron-Distal4.246324.37667K562SAFB2
chrX113108294113108362-intron-Distal4.617455.18738K562TARDBP
chrX112986508112986599-intron-Distal3.783703.12651K562SAFB2
chrX113102043113102148-intron-Distal4.696234.97094K562SAFB2
chrX113106594113106680-intron-Distal4.110957.81859K562SAFB2
chrX113138854113138918-intron-Distal3.842004.95618K562SAFB2
chrX113101175113101242-intron-Distal4.118755.97050K562SAFB2
chrX113173388113173473-intron-Distal4.413399.68574K562SAFB2
chrX113137597113137650-intron-Distal4.189574.16015K562SAFB2
chrX113100207113100280-intron-Distal3.306814.20097K562SAFB2
chrX113172446113172510-intron-Distal4.891777.97284K562SAFB2
chrX113169480113169530-intron-Distal4.574024.97094K562SAFB2
chrX113143494113143595-intron-Distal3.469166.12546K562SAFB2
chrX113069704113069764-intron-Distal3.974023.33164K562SAFB2
chrX113128534113128615-intron-Distal5.480468.34301K562TARDBP
chrX113108096113108184-intron-Distal3.189784.01238K562SAFB2
chrX112982098112982137-intron-Distal4.185563.18981K562PTBP1
chrX113169311113169384-intron-Distal4.095099.33672K562SAFB2
chrX113173545113173636-intron-Distal3.487705.56198K562SAFB2
chrX113171320113171370-intron-Distal3.411703.73364K562SAFB2
chrX113171611113171692-intron-Distal4.159436.99206K562SAFB2
chrX113172945113172981-intron-Distal4.269814.56270K562SAFB2
chrX113080425113080535-intron-Distal3.022183.62826K562HNRNPL
chrX113062557113062637-intron-Distal4.255783.71613K562UCHL5
chrX113029232113029361-intron-Distal3.526835.02933K562CSTF2T
chrX113120407113120534-intron-Distal3.848696.99206K562SAFB2
chrX113147832113147896-intron-Distal5.109563.91475K562PTBP1
chrX113063747113063842-intron-Distal3.385473.73364K562SAFB2
chrX113171752113171781-intron-Distal4.090873.50894K562SAFB2
chrX113174163113174268-intron-Distal4.215124.75225K562ILF3
chrX113094027113094115-intron-Distal4.124447.62589K562PTBP1
chrX113105268113105358-intron-Distal5.084506.68667K562SAFB2
chrX113108204113108260-intron-Distal3.756063.34630K562SAFB2
chrX113172019113172062-intron-Distal3.242473.16798K562SAFB2
chrX113129348113129403-intron-Distal3.223154.79074K562KHSRP
chrX113173350113173436-intron-Distal3.787163.70663K562PPIL4
chrX113079427113079535-intron-Distal4.672097.90174K562AGGF1
chrX113129062113129123-intron-Distal5.111795.89856K562PTBP1
chrX113141837113141933-intron-Distal5.8987013.53269K562PTBP1
chrX113181233113181321-intron-Distal5.4676610.23897K562LIN28B
chrX113107689113107794-intron-Distal4.6611212.41098K562SAFB2
chrX113135927113135998-intron-Distal3.694405.15509K562SAFB2
chrX113150878113150950-intron-Distal3.614106.23199K562HNRNPL
chrX112889352112889419-intron-Distal3.738603.12651K562SAFB2
chrX113173207113173318-intron-Distal4.3470412.24291K562SAFB2
chrX113170762113170810-intron-Distal3.608384.55496K562SAFB2
chrX113132095113132157-intron-Distal4.705544.97094K562SAFB2
chrX113027280113027342-intron-Distal3.588783.11628K562KHSRP
chrX113107700113107800-intron-Distal3.764635.65349K562UCHL5
chrX113099243113099287-intron-Distal3.745363.26015K562PTBP1
chrX113173038113173106-intron-Distal3.771455.13780K562SAFB2
chrX113106436113106521-intron-Distal3.465893.75707K562SAFB2
chrX113054038113054104-intron-Distal3.843293.06015K562MATR3
chrX113172710113172743-intron-Distal4.285324.56270K562SAFB2
chrX113056348113056478-intron-Distal3.921353.26999K562KHSRP
chrX113132157113132198-intron-Distal4.165183.12651K562SAFB2
chrX113099180113099219-intron-Distal7.0966518.74271K562PTBP1
chrX113160829113160930-intron-Distal3.380243.12997K562KHDRBS1
chrX113147896113147953-intron-Distal3.620373.26015K562PTBP1
chrX113132907113132960-intron-Distal4.067223.95960K562SAFB2
chrX113172543113172594-intron-Distal3.462176.73902K562SAFB2
chrX113165934113166004-intron-Distal4.573754.58306K562SAFB2
chrX113105454113105532-intron-Distal3.581814.76274K562UCHL5
chrX113128421113128531-intron-Distal3.993073.72005K562MATR3
chrX113062573113062641-intron-Distal3.284913.34630K562SAFB2
chrX113100360113100442-intron-Distal3.717175.56248K562SAFB2
chrX113132619113132704-intron-Distal3.785325.15509K562SAFB2
chrX113027096113027243-intron-Distal5.241715.68841K562KHSRP
chrX113134847113134917-intron-Distal4.587165.84943K562SAFB2
chrX113166904113166961-intron-Distal4.237744.56270K562SAFB2
chrX113172594113172702-intron-Distal5.2217918.34784K562SAFB2
chrX113100927113101019-intron-Distal4.522704.16015K562SAFB2
chrX113131959113132045-intron-Distal4.711605.42824K562SAFB2
chrX113106260113106398-intron-Distal3.285225.51984K562UCHL5
chrX113133095113133147-intron-Distal3.228193.16798K562SAFB2
chrX113079461113079538-intron-Distal4.714084.70117K562HNRNPL
chrX113135864113135909-intron-Distal4.016283.54264K562SAFB2
chrX113150756113150829-intron-Distal4.211594.05919K562AGGF1
chrX113144741113144878-intron-Distal4.392464.58306K562SAFB2
chrX113110536113110652-intron-Distal3.570294.48570K562HNRNPL
chrX113172786113172870-intron-Distal3.673937.52497K562SAFB2
chrX113170893113170971-intron-Distal4.930446.68667K562SAFB2
chrX113150894113150943-intron-Distal3.755347.02525K562AGGF1
chrX113171004113171071-intron-Distal4.875387.54438K562SAFB2
chrX113029544113029683-intron-Distal4.813804.79379K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP5-964N17.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP5-964N17.1 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP5-964N17.1 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP5-964N17.1 is not available on ENCORE database.






No RBPs affect the gene expression of RP5-964N17.1 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP5-964N17.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP5-964N17.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP5-964N17.1 is not avaliable on ENCORE database.