TPTE2P2

General Information

Gene Name       : TPTE2P2
Gene ID             : ENSG00000272281.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TPTE2P2)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TPTE2P2ENSG00000272281.60.000.000.00ENCSR000AEF
HepG2TPTE2P2ENSG00000272281.60.000.000.00ENCSR985KAT
K562TPTE2P2ENSG00000272281.61.040.820.93ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TPTE2P2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • TPTE2P2 RNA is bound by 5 proteins.  







eCLIP assay for TPTE2P2 is not avaliable on ENCORE database.





5 proteins are bound to TPTE2P2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr135285791152857998-intron-Distal3.917783.86679K562SAFB2
chr135285886252858952-intron-Distal4.111724.37667K562SAFB2
chr135285749652857547-intron-Distal,intron-Proximal4.972875.58150K562SF3B4
chr135281403052814074-intron-Distal5.6117511.33143K562EXOSC5
chr135285764952857745-intron-Distal4.090074.54401K562KHSRP
chr135286206452862175-intron-Distal4.438325.84943K562SAFB2
chr135281354752813594-intron-Distal4.894496.41304K562EXOSC5
chr135286638652866481-intron-Distal4.651324.76017K562DGCR8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TPTE2P2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TPTE2P2 is not available on ENCORE database.

  • 6 RBPs can affect the levels of TPTE2P2.  








The Knockdown/knockout RNA-Seq assay for TPTE2P2 is not available on ENCORE database.





6 RBPs can affect the gene expression of TPTE2P2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TPTE2P2ENSG00000272281.259.2419095.26460-0.685301.838601.30170K562AKAP8L
TPTE2P2ENSG00000272281.210.8839041.68110-1.937203.516702.45460K562HNRNPM
TPTE2P2ENSG00000272281.259.89620113.26290-0.919103.268902.26660K562MBNL1
TPTE2P2ENSG00000272281.235.2074074.89420-1.089002.685901.88100K562PUF60
TPTE2P2ENSG00000272281.242.1329094.48860-1.165203.319902.73360K562PUS1
TPTE2P2ENSG00000272281.245.5362092.05470-1.015503.122602.49830K562RBM15
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TPTE2P2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TPTE2P2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TPTE2P2 is not avaliable on ENCORE database.