JPX

General Information

Gene Name       : JPX
Gene ID             : ENSG00000225470.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: JPX)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878JPXENSG00000225470.718.0818.3018.19ENCSR000AEF
HepG2JPXENSG00000225470.711.1817.6614.42ENCSR985KAT
K562JPXENSG00000225470.727.3929.3528.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for JPX is not avaliable on ENCORE database.



Proteins bound to RNA

  • JPX RNA is bound by 18 proteins.  







eCLIP assay for JPX is not avaliable on ENCORE database.





18 proteins are bound to JPX RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX7320538773205508+intron-Distal3.196295.01170K562KHSRP
chrX7318556273185589+intron-Distal3.188394.86332HepG2SUGP2
chrX7321981573219890+intron-Distal3.778013.19638K562SAFB2
chrX7318255873182648+intron-Distal3.076265.37867HepG2SUGP2
chrX7319252173192575+intron-Distal3.9769211.11621K562KHSRP
chrX7318658773186632+intron-Distal4.146784.24113K562MATR3
chrX7319294273193047+intron-Distal3.042936.02682HepG2KHSRP
chrX7319489373194959+intron-Distal4.1883913.46127HepG2QKI
chrX7318147473181534+intron-Distal3.046734.46039HepG2MATR3
chrX7319380573193852+intron-Distal3.7150310.06143K562KHSRP
chrX7318266573182730+intron-Distal3.933873.21228K562TIA1
chrX7320067473200730+intron-Distal3.232418.04002K562KHSRP
chrX7318598773186047+intron-Distal4.962096.79824HepG2HNRNPM
chrX7319442373194464+intron-Distal3.9924611.01904K562KHSRP
chrX7319997373200016+intron-Distal4.022558.11138K562KHSRP
chrX7319407073194112+intron-Distal4.141258.98664K562KHSRP
chrX7320166073201716+intron-Distal3.326888.86655K562KHSRP
chrX7318939273189421+intron-Distal3.8568111.01904K562KHSRP
chrX7319372873193839+intron-Distal4.246995.63677K562PTBP1
chrX7319489073194989+intron-Distal3.4937810.15366K562QKI
chrX7319385373193930+intron-Distal4.0665820.96273K562KHSRP
chrX7319495973195004+intron-Distal3.757804.52298HepG2QKI
chrX7320157973201630+intron-Distal6.1381019.91507K562KHSRP
chrX7317401373174097+intron-Distal3.023644.74176K562HNRNPL
chrX7319453673194602+intron-Distal4.3510616.80622K562KHSRP
chrX7319319673193261+intron-Distal3.416199.69133K562KHSRP
chrX7321416973214266+intron-Distal3.188683.40713K562HNRNPL
chrX7318980873189851+intron-Distal4.8626716.40917K562KHSRP
chrX7318619773186283+intron-Distal4.232308.48883K562HNRNPM
chrX7318613473186178+intron-Distal4.7762811.31861HepG2HNRNPM
chrX7320101873201149+intron-Distal3.453007.76412HepG2U2AF2
chrX7318598173186035+intron-Distal4.415904.27460K562HNRNPM
chrX7320096373201029+intron-Distal3.5507610.63600K562KHSRP
chrX7318668773186774+intron-Distal4.3657815.02086HepG2SUGP2
chrX7318618873186240+intron-Distal3.393147.04936HepG2MATR3
chrX7318942173189454+intron-Distal4.203199.94910K562KHSRP
chrX7318636473186398+intron-Distal3.737445.13840HepG2MATR3
chrX7318619673186235+intron-Distal4.577698.71921HepG2HNRNPM
chrX7321315273213214+intron-Distal3.577195.08575HepG2SUGP2
chrX7317586773176033+intron-Distal3.831349.29670K562ILF3
chrX7318570773185785+intron-Distal5.057718.59780K562MATR3
chrX7319506273195103+intron-Distal3.318509.06665K562KHSRP
chrX7319275673192816+intron-Distal4.9017225.17007K562KHSRP
chrX7318973673189808+intron-Distal5.3940323.52061K562KHSRP
chrX7321409673214265+intron-Distal3.088685.88625HepG2HNRNPL
chrX7318609473186124+intron-Distal5.3728111.07357HepG2SUGP2
chrX7319281673192858+intron-Distal3.325336.23972K562KHSRP
chrX7320138773201475+intron-Distal4.7830321.64350K562KHSRP
chrX7318940173189487+intron-Distal3.213426.18258HepG2U2AF2
chrX7321339173213430+intron-Distal4.138504.03915HepG2SUGP2
chrX7318644473186518+intron-Distal3.6162511.16061HepG2SUGP2
chrX7320171673201741+intron-Distal3.717885.98773K562KHSRP
chrX7318583173185855+intron-Distal3.079774.40773HepG2SUGP2
chrX7319992073199973+intron-Distal4.7340019.24552K562KHSRP
chrX7320150073201529+intron-Distal4.9395013.54317K562KHSRP
chrX7319512073195214+intron-Distal3.5845812.37236K562KHSRP
chrX7318571273185794+intron-Distal3.9303113.30667HepG2SUGP2
chrX7320102973201099+intron-Distal4.0360414.86211K562KHSRP
chrX7319288473192917+intron-Distal3.704879.31101K562KHSRP
chrX7318156973181662+intron-Distal4.786866.08205HepG2MATR3
chrX7318632073186364+intron-Distal3.357953.10961HepG2MATR3
chrX7320109973201130+intron-Distal4.874367.58902K562KHSRP
chrX7319107473191123+intron-Distal3.394126.24191K562KHSRP
chrX7318826773188325+intron-Distal4.220093.72398HepG2SFPQ
chrX7319293573193007+intron-Distal4.5018425.80413K562KHSRP
chrX7318923573189265+intron-Distal3.8669513.89659K562KHSRP
chrX7318012873180202+intron-Distal5.254999.43874K562TARDBP
chrX7318613273186193+intron-Distal5.450668.13679K562HNRNPM
chrX7319095973191068+intron-Distal3.2480610.03681K562KHSRP
chrX7318720573187352+intron-Distal3.6635313.33862K562HNRNPL
chrX7317126873171339+intron-Distal4.129563.98265HepG2ILF3
chrX7318658373186646+intron-Distal4.4962217.35740HepG2SUGP2
chrX7318671173186755+intron-Distal3.843293.06015K562MATR3
chrX7318985173189895+intron-Distal3.597747.93121K562KHSRP
chrX7321328773213370+intron-Distal3.625204.76825K562KHSRP
chrX7319419673194277+intron-Distal3.8213620.26603K562KHSRP
chrX7319429573194341+intron-Distal3.8819114.95093K562KHSRP
chrX7317127673171328+intron-Distal3.067403.15971K562ILF3
chrX7318576673185828+intron-Distal3.698485.57156HepG2QKI
chrX7318632973186382+intron-Distal3.079777.13957HepG2SUGP2
chrX7321310173213143+intron-Distal3.775854.69074K562PTBP1
chrX7318653973186583+intron-Distal4.6429913.34139HepG2SUGP2
chrX7323154273231629+intron-Distal4.119493.20552HepG2KHSRP
chrX7321316673213271+intron-Distal3.297005.12973HepG2MATR3
chrX7319462473194699+intron-Distal4.849207.27881HepG2KHSRP
chrX7318693573187005+intron-Distal3.281004.13620K562KHSRP
chrX7318147473181554+intron-Distal3.738157.98306HepG2SUGP2
chrX7320004973200144+intron-Distal4.1528313.78079K562KHSRP
chrX7320152973201574+intron-Distal4.0854110.16833K562KHSRP
chrX7318982473189877+intron-Distal3.660114.21358HepG2U2AF2
chrX7318939973189447+intron-Distal4.223783.47043HepG2KHSRP
chrX7319021373190247+intron-Distal3.082745.34873K562KHSRP
chrX7321306473213135+intron-Distal3.289444.53157HepG2MATR3
chrX7320213873202188+intron-Distal3.132925.17040K562KHSRP
chrX7318669973186748+intron-Distal3.658524.61322HepG2MATR3
chrX7318929873189331+intron-Distal3.286538.04002K562KHSRP
chrX7319270773192756+intron-Distal4.2767115.10637K562KHSRP
chrX7318469473184770+intron-Distal3.696108.49452HepG2SUGP2
chrX7319446473194508+intron-Distal3.404087.63715K562KHSRP
chrX7319466873194726+intron-Distal3.324253.64762HepG2QKI
chrX7320147573201500+intron-Distal5.5297513.38264K562KHSRP
chrX7319490373194953+intron-Distal3.251013.29213HepG2KHSRP
chrX7318571473185797+intron-Distal3.191196.69182HepG2MATR3
chrX7318222573182275+intron-Distal4.257679.66158HepG2SUGP2
chrX7319490973194956+intron-Distal3.277344.02686HepG2U2AF2
chrX7319670973196809+intron-Distal4.160887.41529HepG2QKI
chrX7318612473186178+intron-Distal4.4456716.32382HepG2SUGP2
chrX7319434173194369+intron-Distal3.5477011.36345K562KHSRP
chrX7319411273194196+intron-Distal4.5153627.11877K562KHSRP
chrX7318920673189235+intron-Distal3.6578210.31216K562KHSRP
chrX7321337373213445+intron-Distal3.751296.04886K562KHSRP
chrX7321283773212914+intron-Distal3.300536.05394HepG2SUGP2
chrX7318619373186252+intron-Distal3.4957410.07257HepG2SUGP2
chrX7317020773170261+intron-Distal3.822323.16986HepG2QKI
chrX7318584473185926+intron-Distal3.560275.42643HepG2MATR3
chrX7319411373194177+intron-Distal4.709775.60990HepG2KHSRP
chrX7323152673231630+intron-Distal4.315683.49011K562KHSRP
chrX7318607973186195+intron-Distal3.635776.46133K562MATR3
chrX7318166973181720+intron-Distal3.224585.59399HepG2SUGP2
chrX7318926573189298+intron-Distal3.735528.89894K562KHSRP
chrX7317871073178801+intron-Distal3.380838.44889K562KHSRP
chrX7318347273183522+intron-Distal3.061513.95507HepG2SUGP2
chrX7319436973194423+intron-Distal3.9422115.38930K562KHSRP
chrX7320114973201225+intron-Distal3.549938.16706HepG2U2AF2
chrX7318585573185940+intron-Distal4.0288218.34598HepG2SUGP2
chrX7318129973181341+intron-Distal4.063243.62238HepG2MATR3
chrX7318919173189252+intron-Distal3.427824.54121HepG2KHSRP
chrX7322021073220375+intron-Distal3.778836.99206K562SAFB2
chrX7317403473174102+intron-Distal4.677684.51080HepG2HNRNPL
chrX7319394873194013+intron-Distal4.3173216.21812K562KHSRP
chrX7320118573201214+intron-Distal3.776806.89837K562KHSRP
chrX7318638273186444+intron-Distal3.6109310.93835HepG2SUGP2
chrX7321984873219872+intron-Distal3.969143.02457HepG2BCLAF1
chrX7319300773193079+intron-Distal4.9072724.26765K562KHSRP
chrX7318770173187755+intron-Distal3.007234.95846K562HNRNPL
chrX7321306173213132+intron-Distal3.209553.18966K562MATR3
chrX7322314073223195+intron-Distal3.329684.25372HepG2HNRNPC
chrX7316417373164264+intron-Proximal3.659467.11310HepG2NCBP2
chrX7316417573164263+intron-Proximal5.1155711.38399K562DDX3X
chrX7316443073164509+intron-Proximal3.416534.48818HepG2GRWD1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for JPX is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for JPX is not available on ENCORE database.

  • 53 RBPs can affect the levels of JPX.  








The Knockdown/knockout RNA-Seq assay for JPX is not available on ENCORE database.





53 RBPs can affect the gene expression of JPX :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
JPXENSG00000225470.2244.60640354.09900-0.533702.308101.81780HepG2AKAP1
JPXENSG00000225470.2205.90230270.63810-0.394401.969701.41000HepG2CELF1
JPXENSG00000225470.2224.25620339.20700-0.597003.035802.38470HepG2DDX3X
JPXENSG00000225470.2247.40530171.764500.526302.504001.39580HepG2EIF2S2
JPXENSG00000225470.2586.74340386.281700.603004.976604.21240HepG2ETF1
JPXENSG00000225470.2328.63960228.577400.523702.127801.44860HepG2FIP1L1
JPXENSG00000225470.2221.87670314.18050-0.501802.053201.50400HepG2MATR3
JPXENSG00000225470.2268.05750185.064400.534402.644201.85350HepG2MSI2
JPXENSG00000225470.2218.81950321.58440-0.555502.638202.01850HepG2NCBP2
JPXENSG00000225470.286.11690172.70580-1.003903.892002.82640HepG2PABPC1
JPXENSG00000225470.2161.14100275.48420-0.773604.844304.08270HepG2PUF60
JPXENSG00000225470.2335.03840246.947300.440002.174101.57110HepG2RBM25
JPXENSG00000225470.2209.83580271.98100-0.374201.838701.31420HepG2SRSF5
JPXENSG00000225470.2336.88860210.181100.680505.469504.57620HepG2ZC3H8
JPXENSG00000225470.2296.38110549.47910-0.8906011.1406010.09730K562AGGF1
JPXENSG00000225470.2437.98770603.75890-0.463103.384202.27320K562AKAP8
JPXENSG00000225470.2326.12280571.74910-0.810008.072506.89970K562AKAP8L
JPXENSG00000225470.2271.50300607.05510-1.1609012.1995011.09440K562AQR
JPXENSG00000225470.2444.72710599.88590-0.431803.583202.53230K562ATP5C1
JPXENSG00000225470.2333.71920444.32760-0.413002.406801.67050K562CPSF6
JPXENSG00000225470.2193.24310275.73590-0.512902.355301.39400K562CSTF2
JPXENSG00000225470.2450.80610615.29790-0.448803.967102.89360K562DKC1
JPXENSG00000225470.2200.79020307.98400-0.617202.638401.39170K562EEF2
JPXENSG00000225470.2188.15160297.62830-0.661602.859601.93070K562EFTUD2
JPXENSG00000225470.2207.07290318.76300-0.622302.356301.41040K562EIF3D
JPXENSG00000225470.2267.78600383.19340-0.517002.798001.87830K562FTO
JPXENSG00000225470.2353.17520238.020900.569203.818803.12510K562FXR1
JPXENSG00000225470.2276.84370424.22220-0.615704.145003.17800K562GPKOW
JPXENSG00000225470.2331.17210426.17340-0.363902.190401.39660K562HNRNPU
JPXENSG00000225470.2337.64650606.79940-0.845709.317307.56630K562KIF1C
JPXENSG00000225470.2234.05660332.09870-0.504802.661701.30550K562LARP7
JPXENSG00000225470.2370.98590580.83150-0.646805.029703.43870K562MAK16
JPXENSG00000225470.2443.93070679.76430-0.614705.708004.31350K562MBNL1
JPXENSG00000225470.2313.04890414.08880-0.403602.183701.40520K562METAP2
JPXENSG00000225470.2257.34540476.46290-0.888705.911204.44560K562NAA15
JPXENSG00000225470.2418.13290516.18910-0.303902.143801.47870K562NSUN2
JPXENSG00000225470.2433.04710683.97470-0.659403.671402.22970K562PABPC1
JPXENSG00000225470.2160.01390419.52670-1.390607.752705.80800K562PABPN1
JPXENSG00000225470.2423.70030547.47880-0.369802.084001.37520K562PPIG
JPXENSG00000225470.2181.20160289.62420-0.676602.808102.05340K562PRPF8
JPXENSG00000225470.2288.13190567.08090-0.976809.390108.43880K562PUS1
JPXENSG00000225470.2316.07150552.48300-0.805708.893207.85690K562RBM15
JPXENSG00000225470.2276.90640516.14170-0.898403.563701.76220K562RBM39
JPXENSG00000225470.2202.29190383.71270-0.923603.052001.76720K562SF1
JPXENSG00000225470.2379.96010509.31490-0.422703.338902.44720K562SF3A3
JPXENSG00000225470.2156.30320261.10750-0.740304.735203.60520K562SF3B4
JPXENSG00000225470.2201.10850440.60090-1.131505.272503.40210K562SNRNP200
JPXENSG00000225470.2205.46400328.17920-0.675604.451003.55810K562SRSF1
JPXENSG00000225470.2305.94750415.05770-0.440002.900201.70020K562SRSF7
JPXENSG00000225470.2504.87920357.678500.497203.673302.72800K562SYNCRIP
JPXENSG00000225470.2144.58180243.41140-0.751503.695102.39130K562U2AF1
JPXENSG00000225470.2132.78960251.37810-0.920706.415205.19790K562U2AF2
JPXENSG00000225470.2715.33020547.324500.386103.439502.64390K562UPF1
JPXENSG00000225470.2345.72280574.89760-0.733703.229701.79450K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for JPX is not available on ENCORE database.





13 RBPs can affect the splicing of JPX :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEJPXENSG00000225470.2chrX+732146747321479673164418731644977321860273218679-0.299000.002800.07908excludedK562PRPF8
SEJPXENSG00000225470.2chrX+7318256573182636731644187316449773214674732147960.150000.000420.06495includedK562MATR3
SEJPXENSG00000225470.2chrX+732186027321867973214674732147967322410473224186-0.349000.003790.05026excludedK562PUS1
SEJPXENSG00000225470.2chrX+732186027321867973214674732147967322410473224186-0.387000.000290.01039excludedK562RBM15
SEJPXENSG00000225470.2chrX+732186027321867973214674732147967322410473224186-0.341000.002740.05953excludedK562AGGF1
MXEJPXENSG00000225470.2chrX+73166833731672097321467473214796731644187316449773218602732186790.208000.001080.021491includedK562PUS1
MXEJPXENSG00000225470.2chrX+73166833731672097321467473214796731644187316449773218602732186790.243000.002090.033661includedK562SRSF1
MXEJPXENSG00000225470.2chrX+7316683373167209732146747321479673164418731644977321860273218679-0.290000.001890.076442includedK562SF3B1
MXEJPXENSG00000225470.2chrX+7316683373167209732146747321479673164418731644977321860273218679-0.233000.001540.013232includedK562AQR
MXEJPXENSG00000225470.2chrX+7316683373167209731825657318263673164418731644977321860273218679-0.285000.000260.002822includedK562AQR
MXEJPXENSG00000225470.2chrX+73166833731672097321467473214796731644187316449773218602732186790.259000.000120.004851includedK562TARDBP
MXEJPXENSG00000225470.2chrX+73166833731672097321467473214796731644187316449773218602732186790.267000.000140.028661includedK562PCBP1
MXEJPXENSG00000225470.2chrX+73166833731672097321467473214796731644187316449773218602732186790.251000.000990.061901includedK562TRA2A
MXEJPXENSG00000225470.2chrX+73166833731672097321467473214796731644187316449773218602732186790.347000.000500.042691includedK562RBM22
MXEJPXENSG00000225470.2chrX+73166833731672097321467473214796731644187316449773218602732186790.285000.000060.008391includedK562HNRNPK
MXEJPXENSG00000225470.2chrX+73166833731672097321467473214796731644187316449773218602732186790.265000.000960.022431includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for JPX is not avaliable on ENCORE database.