PCGF3

General Information

Gene Name       : PCGF3
Gene ID             : ENSG00000185619.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PCGF3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PCGF3ENSG00000185619.187.5410.659.10ENCSR000AEF
HepG2PCGF3ENSG00000185619.1833.3615.3124.34ENCSR985KAT
K562PCGF3ENSG00000185619.1814.7512.7413.75ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PCGF3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PCGF3 RNA is bound by 60 proteins.  







eCLIP assay for PCGF3 is not avaliable on ENCORE database.





60 proteins are bound to PCGF3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4724376724437+3'-UTR,5'-UTR,intron-Proximal6.7578821.35266K562SF3B4
chr4762509762572+3'-UTR4.510344.18170HepG2PABPN1
chr4762516762580+3'-UTR3.112744.55013HepG2ZC3H11A
chr4737208737284+3'-UTR,CDS,intron-Proximal4.154757.33504K562SF3B4
chr4760921760988+3'-UTR4.339955.48415HepG2EIF3H
chr4763320763437+3'-UTR4.266345.60462HepG2PABPN1
chr4731255731314+3'-UTR,CDS,intron-Proximal4.126107.48753K562ZNF622
chr4724891725002+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.713465.84546K562RBFOX2
chr4724897724904+3'-UTR,5'-UTR,intron-Proximal3.774478.91632HepG2AQR
chr4726269726356+3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.310138.83340K562GTF2F1
chr4731282731311+3'-UTR,CDS,intron-Proximal3.169645.21025HepG2PPIG
chr4726219726356+3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.2952120.65856K562CSTF2T
chr4724898724903+3'-UTR,5'-UTR,intron-Proximal5.4551126.03057K562AQR
chr4726133726240+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.7520611.49456K562ILF3
chr4755154755204+3'-UTR,CDS4.182253.60441HepG2GRWD1
chr4731273731310+3'-UTR,CDS3.517694.06531HepG2GRWD1
chr4758775758830+3'-UTR,CDS3.826246.46787HepG2GRWD1
chr4758803758851+3'-UTR,CDS3.327745.58370HepG2PPIG
chr4726132726238+3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.4405821.19666HepG2DDX59
chr4760051760133+3'-UTR4.038643.51789K562IGF2BP2
chr4726230726332+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.479084.35933K562RBFOX2
chr4760750760815+3'-UTR4.248573.56427K562FAM120A
chr4762642762730+3'-UTR3.349963.21969HepG2ZC3H11A
chr4759823759887+3'-UTR,CDS3.176534.24993HepG2PPIG
chr4759869759913+3'-UTR3.991313.60441HepG2GRWD1
chr4724875724934+3'-UTR,5'-UTR,intron-Proximal3.4563318.66001HepG2PRPF8
chr4726132726217+5'-UTR,intron-Distal,intron-Proximal4.2012713.14650HepG2CSTF2T
chr4726143726226+5'-UTR,intron-Distal,intron-Proximal3.318747.76777K562PRPF8
chr4726139726231+5'-UTR,intron-Distal,intron-Proximal3.232123.86715K562HNRNPK
chr4728712728801+5'-UTR,CDS,intron-Proximal3.297593.62863K562SRSF1
chr4728693728773+5'-UTR,CDS,intron-Proximal3.8382117.53727HepG2AQR
chr4728467728563+5'-UTR,intron-Distal,intron-Proximal3.329327.96096K562U2AF2
chr4728460728531+5'-UTR,intron-Distal,intron-Proximal3.2144017.73105HepG2U2AF2
chr4726161726219+5'-UTR,intron-Distal,intron-Proximal5.132757.75663K562CSTF2T
chr4726090726212+5'-UTR,intron-Distal,intron-Proximal5.6537612.21867HepG2HNRNPK
chr4727762727812+5'-UTR,CDS,intron-Distal4.1170213.01075HepG2AQR
chr4699718699764+5'-UTR,intron-Proximal3.302163.77385HepG2NCBP2
chr4726132726205+5'-UTR,intron-Distal,intron-Proximal3.547824.51399HepG2ILF3
chr4718890718923+5'-UTR,intron-Distal5.228818.81972K562RBFOX2
chr4728704728741+5'-UTR,CDS,intron-Proximal4.9909824.42490K562AQR
chr4727683727815+5'-UTR,CDS,intron-Distal4.6602053.28085HepG2PRPF8
chr4728694728774+5'-UTR,CDS,intron-Proximal3.7737715.17495HepG2PRPF8
chr4726128726208+5'-UTR,intron-Distal,intron-Proximal5.0618631.24452HepG2PCBP2
chr4727751727837+5'-UTR,CDS,intron-Distal3.4010311.70132K562EFTUD2
chr4726146726230+5'-UTR,intron-Distal,intron-Proximal3.501624.98826K562RBFOX2
chr4728478728525+5'-UTR,intron-Distal,intron-Proximal3.813424.23459K562PRPF8
chr4727681727853+5'-UTR,CDS,intron-Distal3.3950125.82851K562PRPF8
chr4718819718924+5'-UTR,intron-Distal3.642563.34442K562FUS
chr4728696728704+5'-UTR,intron-Proximal5.8854111.56697K562AQR
chr4728467728532+5'-UTR,intron-Distal,intron-Proximal3.495905.03733HepG2U2AF1
chr4728646728761+5'-UTR,CDS,intron-Proximal4.392237.43248HepG2SF3A3
chr4728710728812+5'-UTR,CDS,intron-Proximal3.120823.68881HepG2SRSF1
chr4699646699718+5'-UTR4.091867.95933HepG2NCBP2
chr4728454728547+5'-UTR,intron-Distal,intron-Proximal3.076844.21310K562U2AF1
chr4699576699734+5'-UTR3.987996.02664K562DDX3X
chr4726134726213+5'-UTR,intron-Distal,intron-Proximal6.0145210.35815K562PCBP1
chr4727723727821+5'-UTR,CDS,intron-Distal4.3788830.59020K562AQR
chr4728741728783+5'-UTR,CDS3.6219910.01357K562AQR
chr4755827755934+intron-Distal3.109673.34630K562SAFB2
chr4715610715650+intron-Distal3.479084.35933K562RBFOX2
chr4727006727069+intron-Distal3.093634.90123HepG2CSTF2T
chr4714148714237+intron-Distal4.582775.52774K562FUS
chr4752182752244+intron-Distal5.9944812.36459K562MATR3
chr4715246715368+intron-Distal7.1798543.93098HepG2CSTF2T
chr4714783714823+intron-Distal5.338348.14666K562EWSR1
chr4715737715827+intron-Distal6.2231021.73648K562RBFOX2
chr4744949745016+intron-Distal3.016185.96949K562NONO
chr4725958726057+intron-Distal3.361427.66017HepG2PRPF8
chr4719219719265+intron-Distal6.5462243.17412K562DROSHA
chr4754014754122+intron-Distal3.603623.89405HepG2PTBP1
chr4713783713822+intron-Distal4.436335.44484K562RBFOX2
chr4707295707390+intron-Distal5.1417518.35286K562HNRNPM
chr4712308712331+intron-Distal4.629264.42197K562EWSR1
chr4753732753846+intron-Distal4.000904.62831HepG2PCBP2
chr4744848744890+intron-Distal3.410484.14896HepG2HNRNPM
chr4745867745917+intron-Distal4.401034.66737HepG2MATR3
chr4756701756773+intron-Distal4.064895.80533HepG2SLTM
chr4717947718027+intron-Distal5.2094413.38981K562DROSHA
chr4703841703875+intron-Distal4.389894.12480HepG2HNRNPM
chr4716906716980+intron-Distal3.472435.49201K562EWSR1
chr4720050720101+intron-Distal4.907796.12846K562EWSR1
chr4715309715361+intron-Distal4.652385.24810K562GTF2F1
chr4744658744797+intron-Distal4.8479013.22117HepG2QKI
chr4715615715646+intron-Distal4.291024.71107K562CSTF2T
chr4703298703358+intron-Distal4.802077.00934K562TARDBP
chr4716803716907+intron-Distal4.727925.94830K562TIA1
chr4754060754119+intron-Distal3.961844.69074K562PTBP1
chr4706941706979+intron-Distal4.1985012.17858HepG2HNRNPM
chr4719516719627+intron-Distal6.3690887.63951K562RBFOX2
chr4752209752296+intron-Distal4.077927.27124HepG2MATR3
chr4714030714084+intron-Distal4.989927.51888HepG2FAM120A
chr4725079725243+intron-Distal4.2934710.36383HepG2PRPF4
chr4715646715715+intron-Distal5.417856.62861HepG2FAM120A
chr4712047712122+intron-Distal3.651404.98826K562RBFOX2
chr4715720715817+intron-Distal7.2971845.46329HepG2RBFOX2
chr4712001712092+intron-Distal4.7299013.34548HepG2CSTF2T
chr4719185719251+intron-Distal6.4674216.23432K562DDX6
chr4715745715825+intron-Distal4.8466211.60079K562EWSR1
chr4746006746089+intron-Distal4.466924.31720HepG2MATR3
chr4711752711806+intron-Distal3.361245.49201K562EWSR1
chr4725991726090+intron-Distal,intron-Proximal3.941803.06084HepG2HNRNPK
chr4715725715820+intron-Distal4.484324.70114K562FUS
chr4701000701069+intron-Distal3.821163.37414K562CSTF2T
chr4714179714242+intron-Distal4.761295.83981HepG2RBFOX2
chr4709823709875+intron-Distal3.918983.02711K562EWSR1
chr4723810723948+intron-Distal3.380673.60809HepG2HNRNPK
chr4717243717324+intron-Distal3.001924.27824K562SLTM
chr4707183707235+intron-Distal5.3652826.38461HepG2HNRNPM
chr4717304717316+intron-Distal4.173604.63077K562RBFOX2
chr4711648711697+intron-Distal5.4728611.06089K562EWSR1
chr4717932718050+intron-Distal4.312407.13447HepG2FAM120A
chr4702265702315+intron-Distal4.432455.36332HepG2CSTF2T
chr4709160709215+intron-Distal3.877933.30664K562NONO
chr4714683714712+intron-Distal5.161696.70265K562EWSR1
chr4715736715809+intron-Distal5.050077.29293K562DDX52
chr4715276715381+intron-Distal4.7118013.66311K562CSTF2T
chr4717238717320+intron-Distal3.577525.78803HepG2FAM120A
chr4725151725234+intron-Distal3.325124.90123HepG2CSTF2T
chr4711755711807+intron-Distal3.247835.68177HepG2CSTF2T
chr4719170719244+intron-Distal3.951527.75520K562EWSR1
chr4713489713547+intron-Distal6.2614715.76817K562EWSR1
chr4713451713550+intron-Distal5.4565812.72684K562CSTF2T
chr4711620711709+intron-Distal4.071303.93293K562FUS
chr4719170719256+intron-Distal6.6053449.23110HepG2RBFOX2
chr4745866745937+intron-Distal3.477534.08528HepG2SUGP2
chr4727235727275+intron-Distal4.237124.49655K562CSTF2T
chr4719576719635+intron-Distal5.6912322.69552HepG2DROSHA
chr4714102714162+intron-Distal3.737125.81451K562CSTF2T
chr4702260702313+intron-Distal4.276273.86024K562EWSR1
chr4722253722309+intron-Distal3.158833.23466HepG2CSTF2T
chr4713468713530+intron-Distal3.620684.00200K562EIF4G2
chr4711848711903+intron-Distal3.208855.15121K562DROSHA
chr4715754715836+intron-Distal4.711573.56427K562FAM120A
chr4707250707398+intron-Distal4.935434.70436K562EWSR1
chr4752244752311+intron-Distal5.9672510.29334K562MATR3
chr4716926716987+intron-Distal4.6696813.53287HepG2CSTF2T
chr4703149703216+intron-Distal4.376615.44904K562TARDBP
chr4752087752156+intron-Distal4.637625.90588K562MATR3
chr4716104716133+intron-Distal3.136085.45050HepG2CSTF2T
chr4709201709327+intron-Distal4.457253.59909K562EXOSC5
chr4744518744591+intron-Distal5.035514.66899HepG2HNRNPM
chr4709037709078+intron-Distal4.040313.87340HepG2CSTF2T
chr4742665742752+intron-Distal3.774894.86210HepG2HNRNPM
chr4726290726360+intron-Distal,intron-Proximal3.404976.28777HepG2CSTF2T
chr4715309715361+intron-Distal3.965983.26507K562MTPAP
chr4711739711794+intron-Distal3.725093.55447K562FUS
chr4715745715823+intron-Distal5.4880012.78265K562CSTF2T
chr4749133749219+intron-Distal4.328503.96879HepG2MATR3
chr4714712714783+intron-Distal6.4746817.54253K562EWSR1
chr4719877719909+intron-Distal3.684385.58283HepG2DROSHA
chr4715345715375+intron-Distal5.3761510.93357K562DROSHA
chr4717929718052+intron-Distal4.531059.11485K562EWSR1
chr4752245752423+intron-Distal4.108163.91009K562HNRNPK
chr4714067714143+intron-Distal4.193056.88258HepG2RBFOX2
chr4711993712094+intron-Distal5.973939.89179K562EWSR1
chr4714199714253+intron-Distal5.844009.89179K562EWSR1
chr4702003702058+intron-Distal3.285243.67595K562EWSR1
chr4717476717533+intron-Distal4.252119.67020HepG2CSTF2T
chr4714674714698+intron-Distal3.919323.43867K562CSTF2T
chr4725801725864+intron-Distal3.062304.07241HepG2RBFOX2
chr4715242715357+intron-Distal4.100849.15560K562FUS
chr4711631711715+intron-Distal4.800576.54349K562CSTF2T
chr4713849713889+intron-Distal4.039213.37414K562CSTF2T
chr4715761715823+intron-Distal3.563713.14365K562NONO
chr4715845715888+intron-Distal4.6177612.81546HepG2CSTF2T
chr4725932726069+intron-Distal3.204225.66167HepG2PRPF4
chr4753716753842+intron-Distal5.287439.40930K562MATR3
chr4713824713882+intron-Distal4.362445.19780K562NONO
chr4713338713397+intron-Distal3.555083.87400K562RBFOX2
chr4717453717543+intron-Distal3.600614.50953K562CSTF2T
chr4719472719523+intron-Distal7.0867033.47708HepG2DROSHA
chr4715741715823+intron-Distal5.0590731.04752K562DROSHA
chr4706800706869+intron-Distal5.0638416.32623HepG2HNRNPM
chr4746360746449+intron-Distal3.212097.56541HepG2SUGP2
chr4711632711722+intron-Distal4.007183.70701HepG2PRPF4
chr4715715715821+intron-Distal4.527575.27767HepG2GTF2F1
chr4714123714215+intron-Distal3.728255.10007K562FAM120A
chr4719558719604+intron-Distal4.562724.14056K562EWSR1
chr4719564719621+intron-Distal7.3944347.73119HepG2RBFOX2
chr4713337713388+intron-Distal5.626498.43668K562EWSR1
chr4719892719942+intron-Distal4.7149020.40638K562RBFOX2
chr4719558719609+intron-Distal8.55894119.61274K562DROSHA
chr4753708753799+intron-Distal4.536453.68462HepG2MATR3
chr4752311752393+intron-Distal4.094548.65905K562MATR3
chr4744188744280+intron-Distal4.520135.04680K562HNRNPM
chr4711653711710+intron-Distal4.772935.48231K562DROSHA
chr4719847719932+intron-Distal3.590087.56410HepG2CSTF2T
chr4719178719263+intron-Distal6.7002415.00664HepG2DDX6
chr4713753713855+intron-Distal3.600624.69053HepG2SFPQ
chr4707239707290+intron-Distal6.6863224.77536HepG2HNRNPM
chr4713084713145+intron-Distal5.6557210.18369K562EWSR1
chr4715740715816+intron-Distal5.733777.03699K562GTF2F1
chr4720059720127+intron-Distal4.081573.70058K562CSTF2T
chr4715531715567+intron-Distal4.912056.89468HepG2RBFOX2
chr4715602715649+intron-Distal3.524113.22046K562AKAP8L
chr4719557719576+intron-Distal5.6209221.99349HepG2DROSHA
chr4744305744374+intron-Distal4.148733.28572K562HNRNPM
chr4726019726041+intron-Distal4.711693.77881HepG2PCBP2
chr4754050754126+intron-Distal4.531485.51760K562MATR3
chr4714147714251+intron-Distal3.411627.92730K562RBFOX2
chr4717254717339+intron-Distal4.951865.86657K562FTO
chr4717229717300+intron-Distal4.4535310.78166HepG2CSTF2T
chr4709162709301+intron-Distal3.921486.88258HepG2RBFOX2
chr4714738714771+intron-Distal4.6171213.05020HepG2CSTF2T
chr4714090714194+intron-Distal4.4820312.84173K562DROSHA
chr4709182709306+intron-Distal4.788015.31505K562HNRNPM
chr4720048720095+intron-Distal4.0127910.73633K562RBFOX2
chr4746548746604+intron-Distal4.163163.76710K562NONO
chr4725959726045+intron-Distal3.047327.68378K562DROSHA
chr4701989702045+intron-Distal4.337574.48935K562CSTF2T
chr4713438713489+intron-Distal4.321429.38883K562EWSR1
chr4703358703449+intron-Distal5.1572111.45661K562EIF4G2
chr4715916715952+intron-Distal5.287466.70265K562EWSR1
chr4716871716950+intron-Distal3.587987.13820K562DROSHA
chr4711984712077+intron-Distal3.881163.35564K562FUS
chr4719488719603+intron-Distal4.250987.65069K562MTPAP
chr4713465713532+intron-Distal4.329183.84248K562LSM11
chr4715640715720+intron-Distal5.5954425.67707HepG2RBFOX2
chr4706890706942+intron-Distal5.8060310.02215K562HNRNPM
chr4714119714186+intron-Distal4.9233610.57169K562EWSR1
chr4715750715827+intron-Distal4.9363124.39374HepG2CSTF2T
chr4707030707183+intron-Distal6.2659338.62918HepG2HNRNPM
chr4716208716258+intron-Distal4.310003.14687K562CSTF2T
chr4716217716247+intron-Distal5.090225.84224K562EWSR1
chr4715264715367+intron-Distal4.6594922.96317HepG2RBFOX2
chr4725813725850+intron-Distal3.234833.49516HepG2CSTF2T
chr4712758712805+intron-Distal3.406894.77785K562RBFOX2
chr4715765715832+intron-Distal4.283794.70015K562DHX30
chr4746358746420+intron-Distal4.637836.67086K562NONO
chr4704012704100+intron-Distal3.669753.07834HepG2STAU2
chr4719471719564+intron-Distal9.26383172.49614HepG2RBFOX2
chr4726563726657+intron-Distal3.177417.11670HepG2CSTF2T
chr4713446713464+intron-Distal3.821333.25923K562RBFOX2
chr4703386703446+intron-Distal4.715155.27179K562EWSR1
chr4726963727006+intron-Distal3.103313.23466HepG2CSTF2T
chr4714119714198+intron-Distal4.364206.90365K562DDX6
chr4714197714242+intron-Distal4.562767.30450K562DROSHA
chr4715580715640+intron-Distal5.3892322.70939HepG2RBFOX2
chr4714771714822+intron-Distal6.0026718.45012HepG2CSTF2T
chr4706942707005+intron-Distal4.7938610.84649K562HNRNPM
chr4752325752394+intron-Distal5.250445.01910HepG2MATR3
chr4717939718042+intron-Distal3.5603811.66886HepG2CSTF2T
chr4746333746421+intron-Distal3.120984.12418HepG2MATR3
chr4707192707249+intron-Distal3.905353.40229HepG2CSTF2T
chr4709170709314+intron-Distal4.5459224.51310HepG2CSTF2T
chr4722249722312+intron-Distal3.390083.94496K562RBFOX2
chr4715300715358+intron-Distal3.479844.70352K562SLTM
chr4706766706864+intron-Distal6.1234214.77383K562HNRNPM
chr4711625711699+intron-Distal3.984799.58042HepG2CSTF2T
chr4714184714238+intron-Distal4.623914.53722K562SLTM
chr4726045726106+intron-Distal,intron-Proximal4.499085.41529HepG2CSTF2T
chr4707233707291+intron-Distal5.0161422.24161K562HNRNPM
chr4714176714253+intron-Distal4.0748915.97540HepG2CSTF2T
chr4717379717442+intron-Distal5.059389.09450HepG2CSTF2T
chr4714731714786+intron-Distal3.479163.01707K562SLTM
chr4711829711932+intron-Distal4.562445.52774K562FUS
chr4722256722348+intron-Distal3.963913.19474K562LSM11
chr4748495748558+intron-Distal3.406534.36650HepG2SUGP2
chr4714986715043+intron-Distal3.221074.74790K562RBFOX2
chr4715307715378+intron-Distal3.178663.62924HepG2DROSHA
chr4713454713548+intron-Distal4.5568217.33360HepG2CSTF2T
chr4715741715819+intron-Distal6.3134018.03162HepG2FAM120A
chr4714029714072+intron-Distal5.072168.98373HepG2CSTF2T
chr4709167709311+intron-Distal3.616194.96623K562SMNDC1
chr4748417748470+intron-Distal4.006983.16028HepG2SUGP2
chr4725959726045+intron-Distal3.489937.20706HepG2CSTF2T
chr4714724714768+intron-Distal3.480153.15824K562FTO
chr4725061725163+intron-Distal3.968515.61307K562GTF2F1
chr4725225725293+intron-Distal4.563674.05003HepG2PCBP2
chr4719184719265+intron-Distal4.228154.48497K562NONO
chr4742651742762+intron-Distal4.496134.27460K562HNRNPM
chr4718011718068+intron-Distal3.562025.02933K562CSTF2T
chr4717312717350+intron-Distal4.7377310.21506K562DROSHA
chr4703235703298+intron-Distal4.830587.67146K562TARDBP
chr4714729714792+intron-Distal4.627655.28165K562CSTF2T
chr4714996715039+intron-Distal4.5282212.05948HepG2CSTF2T
chr4704388704439+intron-Distal3.764933.07008K562NONO
chr4717948718011+intron-Distal4.674356.64314K562CSTF2T
chr4717244717528+intron-Distal5.5777228.20069K562EWSR1
chr4707294707418+intron-Distal6.4868822.92139HepG2HNRNPM
chr4719164719242+intron-Distal5.3978710.49064HepG2DROSHA
chr4714971715028+intron-Distal4.378954.42826K562LSM11
chr4715745715822+intron-Distal5.305768.53822K562SLTM
chr4757842757892+intron-Distal4.066173.42967K562SLTM
chr4725074725174+intron-Distal3.403433.41847HepG2GTF2F1
chr4744498744559+intron-Distal3.165484.83120HepG2MATR3
chr4714985715049+intron-Distal5.2510411.99604K562EWSR1
chr4714888714911+intron-Distal3.270376.28777HepG2CSTF2T
chr4710757710816+intron-Distal3.925623.49140K562RBFOX2
chr4719477719598+intron-Distal7.0856737.06366HepG2DDX6
chr4719859719892+intron-Distal3.9611515.01515K562RBFOX2
chr4725234725295+intron-Distal3.905356.85787HepG2CSTF2T
chr4715599715621+intron-Distal4.918984.98766K562EWSR1
chr4715827715894+intron-Distal4.469234.12150K562LSM11
chr4719184719266+intron-Distal3.693824.36101K562MTPAP
chr4703753703820+intron-Distal3.834686.15196HepG2HNRNPM
chr4725188725237+intron-Distal5.9105710.81409HepG2XPO5
chr4757073757179+intron-Distal3.513285.51859K562SLTM
chr4713112713156+intron-Distal4.421734.70168K562CSTF2T
chr4714087714145+intron-Distal4.303113.30630HepG2SLTM
chr4714585714597+intron-Distal3.047323.95571K562DROSHA
chr4744207744271+intron-Distal3.907276.18699HepG2MATR3
chr4750969751080+intron-Distal4.086003.33944K562MATR3
chr4715761715823+intron-Distal3.208864.00685K562TIA1
chr4714092714176+intron-Distal4.7931322.54096HepG2CSTF2T
chr4709158709315+intron-Distal4.0802911.90969K562CSTF2T
chr4715741715822+intron-Distal6.174896.42144K562FASTKD2
chr4709215709298+intron-Distal4.053186.54942K562NONO
chr4719256719346+intron-Distal7.3280336.40274HepG2RBFOX2
chr4752218752291+intron-Distal4.483376.59655K562PTBP1
chr4715262715394+intron-Distal4.7599119.25638K562RBFOX2
chr4715855715899+intron-Distal4.362395.28165K562CSTF2T
chr4709183709304+intron-Distal3.190763.59074K562LSM11
chr4752488752536+intron-Distal3.963094.28254HepG2MATR3
chr4715001715020+intron-Distal5.557446.82579K562DROSHA
chr4742710742763+intron-Distal4.030193.82910K562NONO
chr4714889714917+intron-Distal5.023805.55667K562EWSR1
chr4714090714191+intron-Distal4.075607.69118HepG2FAM120A
chr4744330744364+intron-Distal3.397454.28420HepG2HNRNPM
chr4722243722330+intron-Distal3.966446.22373K562DROSHA
chr4713459713553+intron-Distal4.8409613.60794K562DROSHA
chr4715736715811+intron-Distal3.357826.10836K562AKAP8L
chr4710609710732+intron-Distal4.814958.87600K562EWSR1
chr4709172709309+intron-Distal3.494393.42564K562DDX52
chr4711754711810+intron-Distal4.472485.36494K562DROSHA
chr4702141702208+intron-Distal3.451764.88713HepG2CSTF2T
chr4706898706941+intron-Distal5.0523814.96125HepG2HNRNPM
chr4716728716767+intron-Distal3.633495.08839HepG2CSTF2T
chr4715585715646+intron-Distal5.348026.03756HepG2FAM120A
chr4719523719557+intron-Distal6.1824537.62980HepG2DROSHA
chr4723797723912+intron-Distal4.151553.90626K562XRN2
chr4719900719903+intron-Distal7.1749021.36453K562DROSHA
chr4719168719245+intron-Distal3.415294.25667K562CSTF2T
chr4709173709304+intron-Distal4.6292612.71809K562EWSR1
chr4714204714249+intron-Distal4.796195.74291HepG2FAM120A
chr4720792720875+intron-Distal4.239163.76710K562NONO
chr4746190746251+intron-Distal4.362444.72743K562NONO
chr4715620715697+intron-Distal5.1237616.16200K562DROSHA
chr4716935716977+intron-Distal3.326143.98726HepG2RBFOX2
chr4717933717994+intron-Distal3.810286.08669HepG2RBFOX2
chr4712034712072+intron-Distal3.869323.14687K562CSTF2T
chr4757117757178+intron-Distal4.642045.90710HepG2HLTF
chr4715857715883+intron-Distal3.856846.55430HepG2RBFOX2
chr4716812716926+intron-Distal3.8937312.65086HepG2CSTF2T
chr4719847719919+intron-Distal4.8543125.92455HepG2RBFOX2
chr4706756706789+intron-Distal5.151348.87179HepG2HNRNPM
chr4715308715367+intron-Distal5.286145.77022K562DDX6
chr4702333702393+intron-Distal4.468114.36133HepG2CSTF2T
chr4707178707233+intron-Distal5.4885821.23485K562HNRNPM
chr4713482713541+intron-Distal5.055127.22168HepG2FAM120A
chr4757095757181+intron-Distal5.222476.38758HepG2SLTM
chr4710676710741+intron-Distal3.897333.25923K562RBFOX2
chr4742575742635+intron-Distal4.441185.16513HepG2HNRNPM
chr4719164719281+intron-Distal7.0238235.65002K562RBFOX2
chr4719391719441+intron-Distal5.2440320.24905HepG2RBFOX2
chr4715728715815+intron-Distal3.493704.13948HepG2PRPF4
chr4715757715819+intron-Distal3.130683.24283HepG2NKRF
chr4715734715828+intron-Distal4.952416.09817HepG2DROSHA
chr4752294752376+intron-Distal3.662035.02233K562PTBP1
chr4756721756785+intron-Distal3.961473.54264K562SAFB2
chr4713450713518+intron-Distal3.412463.99763K562SLTM
chr4715318715363+intron-Distal4.011886.13250K562AKAP8L
chr4709157709300+intron-Distal3.602448.08965K562RBFOX2
chr4717214717314+intron-Distal4.284698.36430HepG2RBFOX2
chr4715265715364+intron-Distal5.6398119.80038K562EWSR1
chr4711846711945+intron-Distal4.2598913.67669HepG2CSTF2T
chr4719183719219+intron-Distal5.7130429.64385K562DROSHA
chr4755656755732+intron-Distal4.227143.75568K562SLTM
chr4719473719516+intron-Distal7.5004751.95157K562RBFOX2
chr4701915701983+intron-Distal3.432094.50953K562CSTF2T
chr4748906748965+intron-Distal4.301124.31871HepG2HNRNPM
chr4714199714249+intron-Distal3.687673.89541K562FTO
chr4713439713530+intron-Distal3.376245.45063K562FUS
chr4715729715813+intron-Distal3.577703.61010K562AGGF1
chr4719472719558+intron-Distal10.17611400.00000K562DROSHA
chr4714316714343+intron-Distal3.455354.35339HepG2CSTF2T
chr4703863703925+intron-Distal4.033733.80512K562CSTF2T
chr4717709717757+intron-Distal3.958567.34629HepG2CSTF2T
chr4711364711415+intron-Distal5.116726.99055K562EWSR1
chr4714689714801+intron-Distal4.6494310.59761K562RBFOX2
chr4711827711910+intron-Distal4.384423.81202K562GEMIN5
chr4704007704060+intron-Distal3.877933.30664K562NONO
chr4711848711946+intron-Distal3.610215.52022HepG2FAM120A
chr4707127707178+intron-Distal6.0344215.81540K562HNRNPM
chr4717929718018+intron-Distal3.783203.35564K562FUS
chr4753712753779+intron-Distal4.796764.40618K562PTBP1
chr4716216716246+intron-Distal4.075238.42985HepG2CSTF2T
chr4713845713888+intron-Distal4.244595.54974K562EWSR1
chr4713335713391+intron-Distal3.422413.15824K562FTO
chr4715911715943+intron-Distal4.365374.90747K562RBFOX2
chr4717238717359+intron-Distal4.996738.31268K562CSTF2T
chr4744520744588+intron-Distal4.755945.31171K562HNRNPM
chr4711833711939+intron-Distal5.062029.42220K562CSTF2T
chr4752220752282+intron-Distal3.466073.30286HepG2PTBP1
chr4711853711940+intron-Distal4.3744711.60079K562EWSR1
chr4710089710166+intron-Distal4.219363.40229HepG2CSTF2T
chr4713433713514+intron-Distal4.014993.30696K562EXOSC5
chr4719845719926+intron-Distal4.363953.70291HepG2FAM120A
chr4714194714250+intron-Distal3.842076.67564K562CSTF2T
chr4713069713112+intron-Distal3.393094.02206K562CSTF2T
chr4719185719250+intron-Distal3.115175.21772HepG2CSTF2T
chr4715281715314+intron-Distal4.133447.65187K562DROSHA
chr4719472719616+intron-Distal6.6391372.77352K562DDX6
chr4745158745215+intron-Distal3.589725.35122K562NONO
chr4703364703467+intron-Distal3.734006.00014K562CSTF2T
chr4710661710739+intron-Distal5.723737.64819K562DROSHA
chr4710094710157+intron-Distal4.324244.70436K562EWSR1
chr4699854700020+intron-Distal,intron-Proximal3.278568.05375HepG2CSTF2T
chr4717386717511+intron-Distal4.396535.53111K562FUS
chr4725171725188+intron-Distal4.752748.88889HepG2XPO5
chr4706804706878+intron-Distal4.462895.42636K562NONO
chr4725058725151+intron-Distal4.0720410.53086HepG2CSTF2T
chr4709178709313+intron-Distal4.5810911.91445K562DROSHA
chr4724363724409+intron-Proximal3.704278.68003HepG2SF3B4
chr4724934724944+intron-Proximal4.7069917.52346HepG2PRPF8
chr4724943724960+intron-Proximal3.885413.52230K562AQR
chr4724903724935+intron-Proximal5.6240527.63431K562AQR
chr4724948724999+intron-Proximal3.355334.14880HepG2CSTF2T
chr4724912724991+intron-Proximal4.093054.22598K562CSTF2T
chr4724369724376+intron-Proximal6.3701415.11298K562SF3B4
chr4724904724944+intron-Proximal5.2581514.27307HepG2AQR
chr4724943724983+intron-Proximal4.706364.96013K562PRPF8
chr4724935724942+intron-Proximal6.1590627.71304K562AQR
chr4724936724993+intron-Proximal3.281016.20918K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PCGF3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PCGF3 is not available on ENCORE database.

  • 82 RBPs can affect the levels of PCGF3.  








The Knockdown/knockout RNA-Seq assay for PCGF3 is not available on ENCORE database.





82 RBPs can affect the gene expression of PCGF3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PCGF3ENSG00000185619.131680.048201235.385700.443403.997602.82450HepG2ADAR
PCGF3ENSG00000185619.131992.053701569.643100.343705.018504.01050HepG2AKAP8L
PCGF3ENSG00000185619.13990.809001329.01960-0.423703.200102.35510HepG2ASCC1
PCGF3ENSG00000185619.132635.085701940.266000.441508.652907.55280HepG2AUH
PCGF3ENSG00000185619.131229.53680916.636000.423602.916101.99160HepG2BCLAF1
PCGF3ENSG00000185619.131959.832601486.967100.398303.851503.15760HepG2BOP1
PCGF3ENSG00000185619.132713.509002098.921300.370402.255001.38340HepG2CCAR1
PCGF3ENSG00000185619.131358.321801561.98360-0.201602.207901.60310HepG2CKAP4
PCGF3ENSG00000185619.132127.310201692.564300.329703.050101.89120HepG2CPSF7
PCGF3ENSG00000185619.132788.400601705.602300.7091013.7285012.51020HepG2CELF1
PCGF3ENSG00000185619.131236.321801444.87060-0.224902.512301.71450HepG2DDX19B
PCGF3ENSG00000185619.131364.031501037.195700.395102.482101.74480HepG2DDX55
PCGF3ENSG00000185619.132843.103101550.209000.874906.430504.96760HepG2DDX59
PCGF3ENSG00000185619.132112.825201321.949700.676406.683805.75770HepG2DDX6
PCGF3ENSG00000185619.131495.646201199.800300.317902.545301.60440HepG2DHX30
PCGF3ENSG00000185619.131296.421701494.63820-0.205301.875101.30110HepG2DKC1
PCGF3ENSG00000185619.131480.463301233.023000.263703.473302.75720HepG2DNAJC2
PCGF3ENSG00000185619.131860.824801270.558600.550405.367204.55850HepG2EIF2S1
PCGF3ENSG00000185619.131515.605301166.754400.377302.846001.93180HepG2EIF3D
PCGF3ENSG00000185619.131961.158001367.223800.520403.461202.69500HepG2EIF4B
PCGF3ENSG00000185619.133071.114002227.772800.463109.615508.60420HepG2ETF1
PCGF3ENSG00000185619.132930.454902075.387100.497604.285903.34500HepG2FIP1L1
PCGF3ENSG00000185619.131712.527401155.730400.567207.064405.84390HepG2FUBP3
PCGF3ENSG00000185619.131854.544001416.952100.388202.977702.25890HepG2FXR1
PCGF3ENSG00000185619.131961.837001395.486600.491304.623603.46100HepG2G3BP2
PCGF3ENSG00000185619.131305.570901038.836800.329602.215501.42020HepG2GEMIN5
PCGF3ENSG00000185619.131760.931401491.530600.239402.680301.71600HepG2HDGF
PCGF3ENSG00000185619.131962.821401685.496500.219702.248501.39720HepG2HNRNPA2B1
PCGF3ENSG00000185619.131078.718501396.93790-0.372903.082702.35580HepG2HNRNPC
PCGF3ENSG00000185619.132072.093501331.248800.638208.120306.97280HepG2HNRNPK
PCGF3ENSG00000185619.131987.708001670.724700.250503.543302.78770HepG2HNRNPL
PCGF3ENSG00000185619.131730.799801387.700700.318604.378303.63100HepG2HNRNPU
PCGF3ENSG00000185619.132106.214001343.733300.648305.487204.02800HepG2KHSRP
PCGF3ENSG00000185619.131828.667901428.125100.356606.389504.87100HepG2KIF1C
PCGF3ENSG00000185619.131834.017001458.842200.330102.127501.56900HepG2NCBP2
PCGF3ENSG00000185619.132226.232901818.644000.291603.004202.21010HepG2NOL12
PCGF3ENSG00000185619.131737.693801298.959600.419703.247302.46710HepG2PABPC4
PCGF3ENSG00000185619.131799.103301373.561200.389305.917904.75050HepG2PARN
PCGF3ENSG00000185619.131654.909801237.714700.419005.796904.76190HepG2PPIL4
PCGF3ENSG00000185619.131735.542001365.139700.346204.364603.71120HepG2PTBP1
PCGF3ENSG00000185619.132240.714501842.825000.281904.561703.84060HepG2PUM1
PCGF3ENSG00000185619.131988.038501478.519800.427105.661904.81460HepG2QKI
PCGF3ENSG00000185619.132379.005401418.451100.745904.907003.98350HepG2RAVER1
PCGF3ENSG00000185619.132939.731801861.987500.6587015.6778014.65030HepG2RBM22
PCGF3ENSG00000185619.131679.559801341.836700.323802.855502.17240HepG2RBM25
PCGF3ENSG00000185619.131768.355501519.284900.218902.146801.65840HepG2NELFE
PCGF3ENSG00000185619.131933.287401414.979300.450207.783706.82800HepG2RECQL
PCGF3ENSG00000185619.131968.071501393.312200.498202.919301.95130HepG2RPS10
PCGF3ENSG00000185619.131661.665701135.331900.549407.071906.14070HepG2RPS19
PCGF3ENSG00000185619.131860.135201446.359200.362903.074102.23040HepG2RPS2
PCGF3ENSG00000185619.131422.27900791.482600.845509.536108.20260HepG2RRP9
PCGF3ENSG00000185619.132664.725201996.101000.416702.504401.86340HepG2SF3A3
PCGF3ENSG00000185619.132175.664601421.320100.6141014.2146013.03470HepG2SF3B4
PCGF3ENSG00000185619.132222.266301664.494600.416808.772707.63490HepG2SLBP
PCGF3ENSG00000185619.131953.357401446.167800.433602.638101.70390HepG2SMNDC1
PCGF3ENSG00000185619.132719.146502103.014000.370607.145206.44350HepG2SRFBP1
PCGF3ENSG00000185619.131120.692401483.53680-0.404705.871305.24670HepG2SRSF1
PCGF3ENSG00000185619.132546.423801572.831800.695006.834205.20730HepG2SRSF3
PCGF3ENSG00000185619.132449.066601714.022100.5147011.079409.94070HepG2SRSF5
PCGF3ENSG00000185619.131759.159901206.924400.5435011.5555010.56510HepG2SRSF9
PCGF3ENSG00000185619.131839.074901386.174000.407802.773501.53540HepG2STAU1
PCGF3ENSG00000185619.131355.967201032.513800.393102.528001.87820HepG2SUPV3L1
PCGF3ENSG00000185619.131533.594402482.31500-0.694803.300202.13780HepG2TBRG4
PCGF3ENSG00000185619.13890.87130692.058700.364202.343901.42030HepG2TFIP11
PCGF3ENSG00000185619.131753.347901225.274200.516906.931905.61630HepG2TIA1
PCGF3ENSG00000185619.132186.449501775.329700.300402.157601.59620HepG2U2AF1
PCGF3ENSG00000185619.132378.973701795.101500.406203.036802.16190HepG2UBE2L3
PCGF3ENSG00000185619.131001.22370609.938700.714907.436006.18380HepG2UCHL5
PCGF3ENSG00000185619.132161.606801819.593100.248402.776801.72820HepG2UTP18
PCGF3ENSG00000185619.131490.891601248.853300.255503.088902.38690HepG2ZC3H8
PCGF3ENSG00000185619.132877.168901946.923000.5634018.9770017.86010HepG2ZNF622
PCGF3ENSG00000185619.132023.651601417.115300.513903.582902.09300HepG2ZRANB2
PCGF3ENSG00000185619.131696.823801428.474100.248302.715702.15220K562AGGF1
PCGF3ENSG00000185619.131583.356001256.819700.333102.364901.56450K562BOP1
PCGF3ENSG00000185619.133630.181302947.217200.300603.747202.60580K562CELF1
PCGF3ENSG00000185619.131700.584901991.84600-0.228102.536601.90900K562DDX47
PCGF3ENSG00000185619.133034.807902397.133600.340205.274003.99710K562EIF4G2
PCGF3ENSG00000185619.13527.36900716.69740-0.442602.345301.70230K562G3BP2
PCGF3ENSG00000185619.131809.364501275.785600.504005.767004.62360K562GPKOW
PCGF3ENSG00000185619.131479.380701799.99230-0.283002.374701.40320K562HNRNPL
PCGF3ENSG00000185619.132045.798401350.236200.5994011.208909.44360K562HNRNPU
PCGF3ENSG00000185619.131739.779201445.779800.267003.061502.21330K562MTPAP
PCGF3ENSG00000185619.131619.189801072.459600.594202.487101.56230K562PABPN1
PCGF3ENSG00000185619.13669.91360945.74230-0.497505.162803.25490K562PCBP1
PCGF3ENSG00000185619.13672.76980925.76170-0.460503.199702.31980K562RPS19
PCGF3ENSG00000185619.131951.935001585.048400.300303.387402.48980K562SF3A3
PCGF3ENSG00000185619.131801.714901213.498900.570105.170803.81840K562SF3B1
PCGF3ENSG00000185619.131180.27940745.209900.663309.949808.28230K562SF3B4
PCGF3ENSG00000185619.131930.555801623.903000.249503.222502.21990K562SRPK2
PCGF3ENSG00000185619.13618.72890921.48160-0.574606.314305.25740K562SRSF1
PCGF3ENSG00000185619.131179.81620894.804600.398802.812301.86780K562TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PCGF3 is not available on ENCORE database.





23 RBPs can affect the splicing of PCGF3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.292000.000130.00394excludedK562SRSF1
SEPCGF3ENSG00000185619.13chr4+726232726287724758724899727460727578-0.393000.000000.03810excludedK562GTF2F1
SEPCGF3ENSG00000185619.13chr4+7285557286057274607275787287197288160.278000.003130.05157includedK562SF3B4
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.299000.000020.02207excludedK562SMNDC1
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.374000.000000.00000excludedHepG2RBM22
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.231000.000030.01283excludedK562WDR3
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.157000.000530.01902excludedK562AKAP8L
SEPCGF3ENSG00000185619.13chr4+7261887262877247587248997274607275780.332000.000000.00004includedHepG2DDX59
SEPCGF3ENSG00000185619.13chr4+7262047262877246657248997274607275780.179000.000700.08346includedK562DROSHA
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.186000.000020.00062excludedK562PUS1
SEPCGF3ENSG00000185619.13chr4+727672727844727460727578728719728816-0.198000.000310.02034excludedHepG2PTBP1
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.304000.000020.00161excludedHepG2PTBP1
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.347000.000000.00007excludedHepG2MATR3
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.398000.000000.00005excludedHepG2SRSF1
SEPCGF3ENSG00000185619.13chr4+726232726287724758724899727460727578-0.271000.002210.08683excludedHepG2PCBP1
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.359000.000000.00466excludedK562HLTF
SEPCGF3ENSG00000185619.13chr4+726232726287724758724899727460727578-0.124000.003860.09215excludedK562UTP18
SEPCGF3ENSG00000185619.13chr4+7261887262877247587248997274607275780.219000.001010.03797includedK562HNRNPU
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.141000.002040.04682excludedK562RBM15
SEPCGF3ENSG00000185619.13chr4+726188726287724758724899727460727578-0.217000.000000.00002excludedK562AGGF1
A3SSPCGF3ENSG00000185619.13chr4+727672728816728719728816727460727578-0.283000.000000.00000shorterHepG2SF3A3
A3SSPCGF3ENSG00000185619.13chr4+727672728816728719728816727460727578-0.202000.000210.04756shorterHepG2PTBP1
A3SSPCGF3ENSG00000185619.13chr4+7276727288167287197288167274607275780.236000.000010.01407longerK562PPIL4
A3SSPCGF3ENSG00000185619.13chr4+727672728816728719728816727460727578-0.290000.000000.00000shorterHepG2SRSF1
A3SSPCGF3ENSG00000185619.13chr4+727672728816728719728816727460727578-0.226000.000000.00094shorterHepG2TIAL1
A3SSPCGF3ENSG00000185619.13chr4+7372397373267372617373267311317313100.054000.002970.01826longerK562AQR
A3SSPCGF3ENSG00000185619.13chr4+727672728816728719728816727460727578-0.228000.000030.01216shorterHepG2HNRNPC
A3SSPCGF3ENSG00000185619.13chr4+727672728816728719728816727460727578-0.218000.000040.00877shorterHepG2PCBP1
A5SSPCGF3ENSG00000185619.13chr4+7550517552587550517552047587717588520.083000.000040.00106longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PCGF3 is not avaliable on ENCORE database.