UBE3A

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	UBE3A	ENSG00000114062.19	40.27	34.60	37.44	ENCSR000AEF
HepG2	UBE3A	ENSG00000114062.19	15.85	32.12	23.98	ENCSR985KAT
K562	UBE3A	ENSG00000114062.19	42.43	41.55	41.99	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for UBE3A is not avaliable on ENCORE database.

Proteins bound to RNA

UBE3A RNA is bound by 44 proteins.

eCLIP assay for UBE3A is not avaliable on ENCORE database.

44 proteins are bound to UBE3A RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	25583189	25583242	-	3'-UTR,intron-Distal	4.07437	3.66655	K562	YBX3
chr15	25582786	25582878	-	3'-UTR,intron-Distal	4.71224	4.32097	HepG2	FUBP3
chr15	25599366	25599468	-	3'-UTR,intron-Distal,intron-Proximal	3.77903	3.42844	K562	KHSRP
chr15	25584088	25584147	-	3'-UTR,intron-Distal	4.08796	8.84200	K562	PABPC4
chr15	25583073	25583134	-	3'-UTR,intron-Distal	3.77931	8.42226	K562	PUM2
chr15	25584201	25584215	-	3'-UTR,intron-Distal,intron-Proximal	6.03501	21.87517	K562	PABPC4
chr15	25584154	25584201	-	3'-UTR,intron-Distal,intron-Proximal	6.09123	75.06656	K562	PABPC4
chr15	25599181	25599364	-	3'-UTR,intron-Distal	4.19988	9.52029	K562	KHSRP
chr15	25583960	25584009	-	3'-UTR,intron-Distal	4.26654	9.52364	K562	PUM2
chr15	25683949	25683971	-	5'-UTR,intron-Distal	4.54618	6.75316	K562	YBX3
chr15	25650599	25650701	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.51592	12.96871	K562	SF3B4
chr15	25683917	25683960	-	5'-UTR,intron-Distal	3.89020	6.95142	HepG2	DDX3X
chr15	25683642	25683687	-	5'-UTR,intron-Distal	3.18127	4.25624	HepG2	DDX3X
chr15	25654281	25654295	-	5'-UTR,intron-Distal	3.92710	3.02250	K562	YBX3
chr15	25683926	25683949	-	5'-UTR,intron-Distal	3.54618	5.78947	K562	YBX3
chr15	25683821	25683899	-	5'-UTR,intron-Distal	4.53529	9.66125	HepG2	DDX3X
chr15	25683737	25683784	-	5'-UTR,intron-Distal,intron-Proximal	4.53979	4.15208	K562	RBM15
chr15	25684075	25684119	-	5'-UTR,intron-Distal	3.91211	3.60202	K562	FXR2
chr15	25683992	25684055	-	5'-UTR,intron-Distal	3.37153	5.81611	K562	GEMIN5
chr15	25654233	25654261	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.27648	15.79111	K562	YBX3
chr15	25652346	25652428	-	5'-UTR,intron-Distal,intron-Proximal	3.67986	9.27521	HepG2	U2AF2
chr15	25683735	25683785	-	5'-UTR,intron-Distal,intron-Proximal	4.61921	4.91909	K562	FMR1
chr15	25683781	25683821	-	5'-UTR,intron-Distal,intron-Proximal	5.21968	9.60748	HepG2	DDX3X
chr15	25683728	25683781	-	5'-UTR,intron-Distal,intron-Proximal	3.05871	4.75864	HepG2	DDX3X
chr15	25599714	25599726	-	CDS,intron-Distal	3.51241	5.37252	K562	YBX3
chr15	25616387	25616410	-	CDS,intron-Distal	3.72827	6.16886	K562	YBX3
chr15	25616367	25616398	-	CDS,intron-Distal	5.13907	7.49561	HepG2	BCLAF1
chr15	25616134	25616183	-	CDS,intron-Distal	3.20480	4.62770	HepG2	HLTF
chr15	25620693	25620806	-	CDS,intron-Distal	3.06891	9.49113	HepG2	BCLAF1
chr15	25620773	25620829	-	CDS,intron-Distal	3.29386	3.34231	K562	RBM15
chr15	25605559	25605602	-	CDS,intron-Distal	3.68589	5.35144	K562	ZNF622
chr15	25615967	25616037	-	CDS,intron-Distal	3.35737	5.28705	K562	PUM1
chr15	25616034	25616097	-	CDS,intron-Distal	3.49057	15.41287	K562	ZNF622
chr15	25605529	25605576	-	CDS,intron-Distal,intron-Proximal	3.38133	4.48818	HepG2	GRWD1
chr15	25616423	25616476	-	CDS,intron-Distal	3.43744	4.41784	HepG2	GRWD1
chr15	25615953	25616074	-	CDS,intron-Distal	4.36732	16.60213	K562	GRWD1
chr15	25605531	25605561	-	CDS,intron-Distal	3.26001	3.08145	HepG2	HLTF
chr15	25616094	25616141	-	CDS,intron-Distal	3.31467	4.48704	K562	AGGF1
chr15	25620879	25620913	-	CDS,intron-Distal,intron-Proximal	3.29764	3.34848	HepG2	PPIG
chr15	25599728	25599745	-	CDS,intron-Distal	4.36434	5.64683	K562	YBX3
chr15	25615916	25616067	-	CDS,intron-Distal	3.38888	5.16413	K562	FXR1
chr15	25584350	25584384	-	CDS,intron-Distal	4.64666	6.69007	K562	YBX3
chr15	25584384	25584403	-	CDS,intron-Distal	3.16129	3.86052	K562	YBX3
chr15	25616457	25616485	-	CDS,intron-Distal	3.48238	5.15776	HepG2	BCLAF1
chr15	25605528	25605574	-	CDS,intron-Distal,intron-Proximal	4.68713	11.76941	K562	UCHL5
chr15	25584369	25584428	-	CDS,intron-Distal	4.33351	3.60286	K562	U2AF1
chr15	25616944	25616953	-	CDS,intron-Distal	3.08034	3.55800	HepG2	BCLAF1
chr15	25616016	25616078	-	CDS,intron-Distal	3.18017	4.16775	K562	TRA2A
chr15	25615985	25616205	-	CDS,intron-Distal	3.03022	14.98213	K562	ZNF800
chr15	25616090	25616177	-	CDS,intron-Distal	4.32930	17.02268	K562	UCHL5
chr15	25615957	25616038	-	CDS,intron-Distal	3.14387	5.46673	HepG2	FXR2
chr15	25616665	25616796	-	CDS,intron-Distal	3.04866	4.16775	K562	TRA2A
chr15	25616846	25616861	-	CDS,intron-Distal	3.18267	4.08412	K562	RBM15
chr15	25616040	25616134	-	CDS,intron-Distal	3.71445	6.23817	HepG2	HLTF
chr15	25615944	25616103	-	CDS,intron-Distal	3.25066	8.74319	HepG2	GRWD1
chr15	25616501	25616573	-	CDS,intron-Distal	3.68299	8.42226	K562	PUM2
chr15	25620659	25620746	-	CDS,intron-Distal	4.11885	8.68374	K562	YBX3
chr15	25620563	25620613	-	CDS,intron-Distal,intron-Proximal	4.62363	4.09264	K562	AQR
chr15	25616107	25616186	-	CDS,intron-Distal	3.94265	5.09222	HepG2	FXR2
chr15	25615940	25616039	-	CDS,intron-Distal	3.40821	7.45062	HepG2	HLTF
chr15	25616019	25616191	-	CDS,intron-Distal	3.77619	4.78288	K562	SRSF7
chr15	25616516	25616552	-	CDS,intron-Distal	3.26037	5.35431	HepG2	BCLAF1
chr15	25616042	25616116	-	CDS,intron-Distal	4.93582	19.54581	HepG2	BCLAF1
chr15	25585277	25585321	-	CDS,intron-Distal	4.02686	3.80193	HepG2	GRWD1
chr15	25615942	25616042	-	CDS,intron-Distal	6.07751	30.42117	HepG2	BCLAF1
chr15	25615954	25616034	-	CDS,intron-Distal	3.28277	13.13574	K562	ZNF622
chr15	25616074	25616103	-	CDS,intron-Distal	3.26639	8.80002	K562	GRWD1
chr15	25605535	25605656	-	CDS,intron-Distal	3.51830	4.56136	K562	GRWD1
chr15	25616659	25616747	-	CDS,intron-Distal	3.25095	14.50537	HepG2	BCLAF1
chr15	25616368	25616489	-	CDS,intron-Distal	4.05154	5.04816	K562	FXR1
chr15	25616679	25616812	-	CDS,intron-Distal	3.43284	3.87859	HepG2	AGGF1
chr15	25584381	25584456	-	CDS,intron-Distal	4.08994	5.16342	K562	SF3B4
chr15	25616816	25616846	-	CDS,intron-Distal	3.61166	6.79943	K562	RBM15
chr15	25584355	25584428	-	CDS,intron-Distal	4.36823	4.47532	K562	U2AF2
chr15	25584334	25584432	-	CDS,intron-Distal	4.64906	18.06493	HepG2	U2AF2
chr15	25616659	25616705	-	CDS,intron-Distal	3.66607	12.17136	K562	ZNF622
chr15	25616656	25616792	-	CDS,intron-Distal	4.25712	23.48826	K562	UCHL5
chr15	25616116	25616213	-	CDS,intron-Distal	5.37550	15.62471	HepG2	BCLAF1
chr15	25615989	25616030	-	CDS,intron-Distal	3.21899	3.90817	K562	AGGF1
chr15	25615986	25616141	-	CDS,intron-Distal	3.16262	3.22477	HepG2	UCHL5
chr15	25616112	25616191	-	CDS,intron-Distal	3.81180	7.74600	K562	FXR2
chr15	25616805	25616860	-	CDS,intron-Distal	3.55943	8.47761	HepG2	BCLAF1
chr15	25601954	25601991	-	CDS,intron-Distal,intron-Proximal	3.69886	5.97823	HepG2	BCLAF1
chr15	25615933	25616090	-	CDS,intron-Distal	3.69539	23.95237	K562	UCHL5
chr15	25620762	25620816	-	CDS,intron-Distal	3.03462	3.60157	HepG2	GRWD1
chr15	25605526	25605571	-	CDS,intron-Distal,intron-Proximal	4.89969	12.44336	HepG2	BCLAF1
chr15	25616102	25616208	-	CDS,intron-Distal	3.23210	13.73403	K562	ZNF622
chr15	25646257	25646319	-	intron-Distal	3.63895	3.12651	K562	SAFB2
chr15	25591396	25591460	-	intron-Distal	3.07818	3.33745	HepG2	HNRNPM
chr15	25665525	25665620	-	intron-Distal	5.02452	6.93116	HepG2	QKI
chr15	25644993	25645044	-	intron-Distal	3.49728	4.16915	HepG2	HLTF
chr15	25683099	25683218	-	intron-Distal	3.42697	8.93727	HepG2	PRPF4
chr15	25683309	25683412	-	intron-Distal	3.00792	6.17297	HepG2	PRPF4
chr15	25647438	25647491	-	intron-Distal	3.74725	4.42924	HepG2	HLTF
chr15	25683102	25683198	-	intron-Distal	3.88536	11.78947	K562	GTF2F1
chr15	25662040	25662160	-	intron-Distal	4.10748	3.62025	K562	MATR3
chr15	25681612	25681683	-	intron-Distal	3.08036	3.09653	HepG2	ILF3
chr15	25668327	25668415	-	intron-Distal	4.75488	6.94732	K562	KHSRP
chr15	25615700	25615712	-	intron-Distal,intron-Proximal	3.96141	4.00320	K562	AQR
chr15	25591784	25591836	-	intron-Distal	4.24970	4.28663	HepG2	SUGP2
chr15	25652450	25652511	-	intron-Distal,intron-Proximal	3.53716	9.27521	HepG2	U2AF2
chr15	25627894	25627980	-	intron-Distal	3.21454	3.43829	K562	EXOSC5
chr15	25650739	25650763	-	intron-Distal,intron-Proximal	4.31803	3.42844	K562	KHSRP
chr15	25640266	25640319	-	intron-Distal	3.92021	3.79098	HepG2	SUGP2
chr15	25591283	25591391	-	intron-Distal	5.14175	6.61547	K562	HNRNPM
chr15	25651802	25651862	-	intron-Distal	4.35891	4.92524	K562	TARDBP
chr15	25628370	25628454	-	intron-Distal	4.26109	4.48560	K562	EXOSC5
chr15	25683306	25683356	-	intron-Distal	3.21519	5.72619	K562	DROSHA
chr15	25598374	25598463	-	intron-Distal	3.26756	4.10408	K562	KHSRP
chr15	25647491	25647535	-	intron-Distal	3.34357	3.34034	HepG2	HLTF
chr15	25638277	25638320	-	intron-Distal	3.95721	3.86809	HepG2	SUGP2
chr15	25615670	25615700	-	intron-Distal,intron-Proximal	3.50535	3.94787	K562	AQR
chr15	25683099	25683206	-	intron-Distal	5.34392	9.90275	HepG2	GTF2F1
chr15	25591391	25591500	-	intron-Distal	3.81536	7.72916	K562	HNRNPM
chr15	25683065	25683187	-	intron-Distal	3.53313	8.34063	K562	CSTF2T
chr15	25622362	25622450	-	intron-Distal	5.11714	8.86284	K562	TARDBP
chr15	25625679	25625773	-	intron-Distal	3.72457	3.76275	K562	PTBP1
chr15	25682498	25682607	-	intron-Distal	4.78788	3.95871	HepG2	ILF3
chr15	25607927	25607987	-	intron-Distal	3.79620	3.19026	HepG2	HNRNPL
chr15	25662046	25662104	-	intron-Distal	3.14205	5.35016	HepG2	SUGP2
chr15	25591793	25591843	-	intron-Distal	4.02201	3.62238	HepG2	MATR3
chr15	25663346	25663409	-	intron-Distal	4.08118	6.51675	HepG2	SUGP2
chr15	25648351	25648459	-	intron-Distal	3.22964	6.34609	K562	SAFB2
chr15	25683063	25683163	-	intron-Distal	3.15137	3.53159	HepG2	DROSHA
chr15	25683593	25683626	-	intron-Distal	4.83227	6.38747	HepG2	AQR
chr15	25625681	25625767	-	intron-Distal	3.55707	4.81278	HepG2	PTBP1
chr15	25666016	25666068	-	intron-Distal	3.06787	3.73266	K562	KHSRP
chr15	25646985	25647037	-	intron-Distal	4.33221	3.85494	HepG2	HLTF
chr15	25680332	25680432	-	intron-Distal	5.22326	10.50009	K562	TARDBP
chr15	25638417	25638501	-	intron-Distal	5.32665	9.49897	HepG2	QKI
chr15	25635393	25635469	-	intron-Distal	4.60009	6.05753	HepG2	SUGP2
chr15	25661451	25661562	-	intron-Distal	4.04223	7.22994	K562	KHSRP
chr15	25605211	25605288	-	intron-Distal	3.08620	3.48890	K562	KHSRP
chr15	25650687	25650739	-	intron-Distal,intron-Proximal	3.49978	3.68839	K562	KHSRP
chr15	25662208	25662253	-	intron-Distal	4.09372	6.51675	HepG2	SUGP2
chr15	25645913	25645991	-	intron-Distal	4.50416	5.81661	K562	SAFB2
chr15	25680462	25680529	-	intron-Distal	4.00831	3.16986	HepG2	QKI
chr15	25596214	25596296	-	intron-Distal	3.46546	7.01633	K562	KHSRP
chr15	25640641	25640723	-	intron-Distal	4.12773	3.79098	HepG2	SUGP2
chr15	25628073	25628123	-	intron-Distal	4.06175	3.78162	K562	HNRNPM
chr15	25661401	25661448	-	intron-Distal	3.78125	5.56048	K562	KHSRP
chr15	25587686	25587778	-	intron-Distal	4.60850	5.84463	HepG2	SUGP2
chr15	25591243	25591368	-	intron-Distal	4.63632	12.40030	HepG2	SUGP2
chr15	25661920	25661960	-	intron-Distal	4.52675	5.04879	HepG2	SUGP2
chr15	25653137	25653205	-	intron-Distal	4.87142	9.90614	K562	XRCC6
chr15	25644508	25644602	-	intron-Distal	3.67125	4.70379	HepG2	HLTF
chr15	25666684	25666819	-	intron-Distal	3.73542	6.64740	HepG2	HNRNPL
chr15	25683333	25683413	-	intron-Distal	3.30326	3.64049	HepG2	XRN2
chr15	25683130	25683192	-	intron-Distal	4.09312	6.43614	HepG2	PCBP2
chr15	25650764	25650856	-	intron-Distal	3.42423	7.01633	K562	KHSRP
chr15	25683626	25683636	-	intron-Distal	4.76951	6.38747	HepG2	AQR
chr15	25591368	25591469	-	intron-Distal	3.57080	9.95310	HepG2	SUGP2
chr15	25683076	25683198	-	intron-Distal	4.20015	8.09753	K562	NONO
chr15	25644983	25645070	-	intron-Distal	3.98021	3.19638	K562	SAFB2
chr15	25666675	25666803	-	intron-Distal	3.77866	6.00711	K562	HNRNPL
chr15	25683319	25683410	-	intron-Distal	3.36201	7.33857	HepG2	CSTF2T
chr15	25636995	25637043	-	intron-Distal	4.39257	4.78128	HepG2	SUGP2
chr15	25635178	25635232	-	intron-Distal	3.27335	3.35050	HepG2	SUGP2
chr15	25683299	25683405	-	intron-Distal	3.19470	5.95781	K562	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for UBE3A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for UBE3A is not available on ENCORE database.
82 RBPs can affect the levels of UBE3A.

The Knockdown/knockout RNA-Seq assay for UBE3A is not available on ENCORE database.

82 RBPs can affect the gene expression of UBE3A :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
UBE3A	ENSG00000114062.13	2145.25950	2751.68900	-0.35920	2.35750	1.86190	HepG2	AKAP1
UBE3A	ENSG00000114062.13	1169.85970	2085.76130	-0.83420	14.00330	12.80540	HepG2	BOP1
UBE3A	ENSG00000114062.13	2453.78160	1952.56500	0.32950	3.61010	2.74510	HepG2	CALR
UBE3A	ENSG00000114062.13	1611.47110	2543.71380	-0.65860	3.24880	2.18750	HepG2	CCAR1
UBE3A	ENSG00000114062.13	1731.81660	2163.13590	-0.32080	2.32420	1.61010	HepG2	CIRBP
UBE3A	ENSG00000114062.13	1439.25310	1914.87000	-0.41190	3.54550	2.77760	HepG2	CPSF6
UBE3A	ENSG00000114062.13	1292.69880	1694.15160	-0.39020	3.51740	2.27650	HepG2	CPSF7
UBE3A	ENSG00000114062.13	1655.50210	1317.97310	0.32880	2.61630	1.95370	HepG2	DDX21
UBE3A	ENSG00000114062.13	1712.57390	2636.00270	-0.62220	6.95490	6.00500	HepG2	DDX3X
UBE3A	ENSG00000114062.13	1550.02980	2174.46650	-0.48840	2.35230	1.45130	HepG2	DDX59
UBE3A	ENSG00000114062.13	1540.45320	2264.16240	-0.55560	4.88990	4.08970	HepG2	DDX6
UBE3A	ENSG00000114062.13	1066.41370	1287.81600	-0.27220	3.35430	2.64880	HepG2	DNAJC2
UBE3A	ENSG00000114062.13	1687.88240	2176.81100	-0.36700	2.82140	2.22240	HepG2	EIF2S1
UBE3A	ENSG00000114062.13	1438.51980	1116.19360	0.36590	2.76000	1.85810	HepG2	EIF3D
UBE3A	ENSG00000114062.13	1767.02170	2405.73690	-0.44520	3.34400	2.64250	HepG2	EIF4A3
UBE3A	ENSG00000114062.13	2444.49730	1951.49230	0.32490	2.29910	1.52440	HepG2	EIF4G1
UBE3A	ENSG00000114062.13	3494.36990	2762.28450	0.33910	6.26300	5.42030	HepG2	ETF1
UBE3A	ENSG00000114062.13	750.28290	2426.97040	-1.69360	42.79330	40.50050	HepG2	FXR1
UBE3A	ENSG00000114062.13	1135.38020	1562.34570	-0.46050	2.62750	1.54610	HepG2	GRSF1
UBE3A	ENSG00000114062.13	1553.38050	2279.49630	-0.55330	6.47230	5.43470	HepG2	HNRNPK
UBE3A	ENSG00000114062.13	1821.17040	2427.81630	-0.41480	3.34930	2.62770	HepG2	MAGOH
UBE3A	ENSG00000114062.13	1115.49090	2441.45610	-1.13010	18.04940	16.55090	HepG2	MATR3
UBE3A	ENSG00000114062.13	1411.16680	2499.00800	-0.82450	10.92270	9.70520	HepG2	NCBP2
UBE3A	ENSG00000114062.13	1348.02560	1961.81940	-0.54130	6.29720	5.14890	HepG2	NOL12
UBE3A	ENSG00000114062.13	652.66360	1247.10580	-0.93420	5.74910	4.14220	HepG2	NONO
UBE3A	ENSG00000114062.13	1439.40690	2225.72240	-0.62880	6.80560	5.68130	HepG2	PABPC4
UBE3A	ENSG00000114062.13	1257.14550	2197.25940	-0.80560	24.32350	22.82230	HepG2	PCBP1
UBE3A	ENSG00000114062.13	2002.63030	1571.04640	0.35010	5.10230	4.08640	HepG2	PRPF4
UBE3A	ENSG00000114062.13	1518.85070	2235.78950	-0.55780	12.01670	11.03570	HepG2	PTBP1
UBE3A	ENSG00000114062.13	1314.09550	1671.14460	-0.34680	5.25870	4.45880	HepG2	PUS1
UBE3A	ENSG00000114062.13	3018.34520	2421.42400	0.31780	3.93490	3.20760	HepG2	QKI
UBE3A	ENSG00000114062.13	2662.97370	2197.59460	0.27700	2.51530	1.86910	HepG2	RBM25
UBE3A	ENSG00000114062.13	1680.45920	2488.22250	-0.56630	13.04300	12.02680	HepG2	NELFE
UBE3A	ENSG00000114062.13	1867.38450	2317.43490	-0.31150	4.57520	3.80940	HepG2	RECQL
UBE3A	ENSG00000114062.13	1116.89500	1290.76200	-0.20870	2.00600	1.44340	HepG2	SAFB2
UBE3A	ENSG00000114062.13	1593.72450	2110.90640	-0.40550	2.39880	1.77220	HepG2	SF3A3
UBE3A	ENSG00000114062.13	2702.51270	2050.47890	0.39820	4.03760	3.20050	HepG2	SF3B1
UBE3A	ENSG00000114062.13	1810.80950	2327.75280	-0.36230	5.93490	5.12490	HepG2	SF3B4
UBE3A	ENSG00000114062.13	1301.75250	1505.24340	-0.20950	2.49200	1.87720	HepG2	SMN1
UBE3A	ENSG00000114062.13	1851.83090	2607.70340	-0.49380	12.16140	11.30920	HepG2	SRFBP1
UBE3A	ENSG00000114062.13	1562.81730	1848.74880	-0.24240	1.92570	1.39130	HepG2	SRSF5
UBE3A	ENSG00000114062.13	2608.25910	2264.15230	0.20400	2.59180	2.09000	HepG2	SSB
UBE3A	ENSG00000114062.13	983.40150	1420.96350	-0.53100	9.93880	8.97130	HepG2	TRIM56
UBE3A	ENSG00000114062.13	2718.26380	1776.82720	0.61330	8.13880	7.06250	HepG2	U2AF1
UBE3A	ENSG00000114062.13	526.54520	799.08880	-0.60180	3.99720	3.08530	HepG2	UCHL5
UBE3A	ENSG00000114062.13	623.44380	1238.87380	-0.99070	6.02430	4.49990	HepG2	UPF2
UBE3A	ENSG00000114062.13	1397.40000	1807.39230	-0.37120	4.57840	3.83930	HepG2	UTP3
UBE3A	ENSG00000114062.13	2112.52020	1521.12900	0.47370	2.72410	1.47380	HepG2	XRCC5
UBE3A	ENSG00000114062.13	998.67960	1331.44610	-0.41490	1.93510	1.32090	HepG2	XRN2
UBE3A	ENSG00000114062.13	1805.93340	1550.40230	0.22000	2.70200	2.03750	HepG2	ZC3H8
UBE3A	ENSG00000114062.13	1566.45730	2058.89820	-0.39440	8.40360	7.58410	HepG2	ZNF622
UBE3A	ENSG00000114062.13	2312.07520	1774.79260	0.38140	3.90870	2.47780	K562	AARS
UBE3A	ENSG00000114062.13	3764.63020	3384.10030	0.15360	1.82370	1.34360	K562	AGGF1
UBE3A	ENSG00000114062.13	1988.60520	2287.79210	-0.20220	2.38270	1.49320	K562	BCLAF1
UBE3A	ENSG00000114062.13	2155.34850	2941.02360	-0.44840	4.58790	3.45310	K562	BOP1
UBE3A	ENSG00000114062.13	2436.59500	3127.15520	-0.36000	4.19820	3.23000	K562	CPSF6
UBE3A	ENSG00000114062.13	1743.18740	2366.05500	-0.44080	5.42950	3.90170	K562	DDX3X
UBE3A	ENSG00000114062.13	4717.76870	4219.68330	0.16090	1.87250	1.31690	K562	DDX47
UBE3A	ENSG00000114062.13	1931.51720	2398.90020	-0.31260	3.75050	2.16160	K562	DDX6
UBE3A	ENSG00000114062.13	2269.73060	2948.45550	-0.37740	4.31870	3.44880	K562	EIF2S2
UBE3A	ENSG00000114062.13	1580.88760	1107.77710	0.51300	2.67940	1.69320	K562	EIF3A
UBE3A	ENSG00000114062.13	2864.03340	2091.57130	0.45340	3.89900	2.64580	K562	EIF3D
UBE3A	ENSG00000114062.13	2036.12550	2471.99700	-0.27990	2.22720	1.48760	K562	EIF4A3
UBE3A	ENSG00000114062.13	1851.53000	2226.21850	-0.26590	2.70010	1.56720	K562	EIF4B
UBE3A	ENSG00000114062.13	1551.55020	2157.83530	-0.47590	7.07730	4.78830	K562	EWSR1
UBE3A	ENSG00000114062.13	2443.00250	3465.03190	-0.50420	5.91710	4.64290	K562	FIP1L1
UBE3A	ENSG00000114062.13	2100.45360	3181.79990	-0.59910	8.10220	6.59140	K562	FMR1
UBE3A	ENSG00000114062.13	1968.04100	2570.78200	-0.38540	5.95760	5.11920	K562	FXR1
UBE3A	ENSG00000114062.13	4061.88250	2643.95980	0.61930	5.56030	4.47850	K562	G3BP2
UBE3A	ENSG00000114062.13	2439.78110	2985.66620	-0.29130	2.62750	1.85110	K562	GPKOW
UBE3A	ENSG00000114062.13	2821.77980	3929.43820	-0.47770	3.95660	3.05510	K562	GRSF1
UBE3A	ENSG00000114062.13	3113.55200	3813.38990	-0.29250	2.91310	1.82570	K562	HNRNPL
UBE3A	ENSG00000114062.13	3813.21830	4698.07240	-0.30110	2.57350	1.80390	K562	HSPD1
UBE3A	ENSG00000114062.13	2446.03380	3156.84590	-0.36800	3.82420	2.72380	K562	MATR3
UBE3A	ENSG00000114062.13	4945.65250	4186.32370	0.24040	2.32770	1.50610	K562	MBNL1
UBE3A	ENSG00000114062.13	2331.88060	2914.34230	-0.32170	3.18690	2.24300	K562	METAP2
UBE3A	ENSG00000114062.13	3782.68510	2934.31640	0.36630	2.38690	1.58100	K562	NAA15
UBE3A	ENSG00000114062.13	2046.29540	2468.36440	-0.27050	2.55800	1.37610	K562	NCBP2
UBE3A	ENSG00000114062.13	2712.26130	3125.50940	-0.20460	3.60500	2.76530	K562	NSUN2
UBE3A	ENSG00000114062.13	2783.52830	3933.26540	-0.49880	5.25650	4.06750	K562	PPIG
UBE3A	ENSG00000114062.13	4635.82520	5446.99230	-0.23260	2.81310	1.84600	K562	PUM2
UBE3A	ENSG00000114062.13	3860.87780	3402.59500	0.18220	1.84930	1.34690	K562	RBM15
UBE3A	ENSG00000114062.13	2258.43560	2947.33150	-0.38410	3.62970	2.65510	K562	RBM22
UBE3A	ENSG00000114062.13	2395.99250	3101.44290	-0.37230	2.67130	1.59900	K562	NELFE
UBE3A	ENSG00000114062.13	2180.92580	1767.33320	0.30330	2.67610	1.61380	K562	SAFB
UBE3A	ENSG00000114062.13	2394.44620	1827.20550	0.39000	3.64590	1.97690	K562	SDAD1
UBE3A	ENSG00000114062.13	2155.37800	3084.10030	-0.51690	10.71620	9.18260	K562	SF3A3
UBE3A	ENSG00000114062.13	2252.72020	2750.07510	-0.28780	2.97320	2.08540	K562	SF3B4
UBE3A	ENSG00000114062.13	3612.02340	3159.72920	0.19290	2.94220	1.98200	K562	SRPK2
UBE3A	ENSG00000114062.13	1918.11040	2418.72700	-0.33460	3.10890	1.97630	K562	SRSF4
UBE3A	ENSG00000114062.13	2671.98660	1989.46880	0.42540	5.90030	4.69160	K562	SYNCRIP
UBE3A	ENSG00000114062.13	2243.98490	3049.10740	-0.44230	3.90820	3.06010	K562	TARDBP
UBE3A	ENSG00000114062.13	2335.44520	2941.13280	-0.33270	3.13050	2.25130	K562	TIA1
UBE3A	ENSG00000114062.13	2662.82030	3314.04490	-0.31560	5.75180	4.75910	K562	UPF1
UBE3A	ENSG00000114062.13	3453.83560	2948.83370	0.22800	3.54280	2.59300	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for UBE3A is not available on ENCORE database.

8 RBPs can affect the splicing of UBE3A :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	UBE3A	ENSG00000114062.13	chr15	-	25652200	25652409			25650607	25650649	25654234	25654354	0.26600	0.00460	0.06941	included	K562	SF3B4
SE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830			25599499	25599573	25601038	25601203	-0.09300	0.00009	0.00277	excluded	K562	SF3B4
SE	UBE3A	ENSG00000114062.13	chr15	-	25660856	25660989			25657054	25657118	25683635	25684128	0.43500	0.00361	0.03560	included	K562	AQR
SE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601203			25599674	25599830	25601837	25602043	-0.05600	0.00001	0.00029	excluded	K562	AQR
SE	UBE3A	ENSG00000114062.13	chr15	-	25652213	25652409			25650607	25650649	25654234	25654354	-0.46600	0.00003	0.00216	excluded	K562	FXR1
SE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830			25599499	25599573	25601038	25601203	-0.11400	0.00001	0.00035	excluded	K562	U2AF2
SE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830			25599499	25599573	25601038	25601203	-0.09300	0.00016	0.00918	excluded	K562	TARDBP
SE	UBE3A	ENSG00000114062.13	chr15	-	25601837	25601889			25601038	25601203	25605529	25605674	-0.12100	0.00474	0.08763	excluded	K562	RBM15
A3SS	UBE3A	ENSG00000114062.13	chr15	-	25601837	25602043			25601837	25601889	25605529	25605674	-0.08100	0.00053	0.09363	shorter	K562	SUPV3L1
A3SS	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599905			25599674	25599830	25601038	25601241	0.05700	0.00000	0.00001	longer	K562	AQR
A3SS	UBE3A	ENSG00000114062.13	chr15	-	25584283	25584437			25584283	25584404	25585231	25585474	0.06000	0.00000	0.00000	longer	K562	AQR
A3SS	UBE3A	ENSG00000114062.13	chr15	-	25601837	25601953			25601837	25601889	25605529	25605674	-0.05800	0.01756	0.08537	shorter	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601203	25601837	25602043	25599499	25599573	25605529	25605674	-0.05200	0.00830	0.09012	2included	K562	U2AF1
MXE	UBE3A	ENSG00000114062.13	chr15	-	25654234	25654354	25657054	25657118	25650607	25650649	25683635	25683688	-0.44000	0.00145	0.05540	2included	K562	FXR1
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599499	25599573	25601837	25601889	25585231	25585375	25605529	25605674	0.05600	0.00535	0.03806	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599905	25601038	25601128	25599179	25599573	25605529	25605674	0.10100	0.00003	0.00047	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599905	25601837	25601889	25599179	25599573	25605529	25605674	0.06800	0.00058	0.00568	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601128	25601837	25602073	25599674	25599830	25605529	25605674	0.07100	0.00000	0.00005	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601128	25601837	25601889	25599674	25599830	25605529	25605674	0.12500	0.00000	0.00002	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601128	25601837	25601953	25599674	25599830	25605529	25605674	0.06200	0.00004	0.00058	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830	25601038	25601128	25599179	25599573	25605529	25605674	0.10100	0.00004	0.00052	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830	25601837	25601889	25599179	25599573	25605529	25605674	0.06800	0.00062	0.00603	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830	25601038	25601241	25599179	25599573	25601837	25601977	0.10200	0.00001	0.00020	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830	25601038	25601191	25599179	25599573	25601837	25601977	0.09000	0.00007	0.00093	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601203	25601837	25602073	25599674	25599830	25605529	25605674	0.07100	0.00000	0.00007	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601203	25601837	25601889	25599674	25599830	25605529	25605674	0.10700	0.00000	0.00003	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601203	25601837	25601953	25599674	25599830	25605529	25605674	0.06100	0.00007	0.00085	1included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601128	25601837	25602043	25599499	25599573	25605529	25605674	-0.07900	0.00015	0.00168	2included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599421	25599573	25599674	25599830	25585231	25585375	25601038	25601203	-0.13500	0.00000	0.00002	2included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599421	25599573	25601837	25602043	25585231	25585375	25605529	25605674	-0.05800	0.00001	0.00010	2included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25605529	25605674	25615712	25616959	25585231	25585375	25620611	25620910	-0.09700	0.00000	0.00002	2included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601203	25601837	25602043	25599499	25599573	25605529	25605674	-0.09800	0.00000	0.00006	2included	K562	AQR
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830	25601038	25601203	25599499	25599573	25601837	25602043	0.11400	0.00426	0.04929	1included	K562	U2AF2
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601203	25601837	25602043	25599499	25599573	25605529	25605674	-0.07000	0.00407	0.07627	2included	K562	TARDBP
MXE	UBE3A	ENSG00000114062.13	chr15	-	25601038	25601203	25601837	25602043	25599499	25599573	25605529	25605674	-0.07800	0.00022	0.00597	2included	K562	SF3B4
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599499	25599573	25601837	25601889	25585231	25585375	25605529	25605674	0.12100	0.00047	0.01384	1included	K562	SUPV3L1
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599830	25601837	25601889	25599499	25599573	25605529	25605674	0.12500	0.00054	0.01540	1included	K562	SUPV3L1
MXE	UBE3A	ENSG00000114062.13	chr15	-	25599674	25599787	25601837	25601889	25599499	25599573	25605529	25605674	0.12500	0.00054	0.01540	1included	K562	SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

UBE3A

General Information

Functions

Localization

Domains (AlphaFold: UBE3A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for UBE3A is not avaliable on ENCORE database.

44 proteins are bound to UBE3A RNA:

eCLIP assay for UBE3A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for UBE3A is not available on ENCORE database.

82 RBPs can affect the gene expression of UBE3A :

The Knockdown/knockout RNA-Seq assay for UBE3A is not available on ENCORE database.

8 RBPs can affect the splicing of UBE3A :

The Knockdown/knockout RNA-Seq assay for UBE3A is not avaliable on ENCORE database.