RP11-248G5.8

General Information

Gene Name : RP11-248G5.8
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-248G5.8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-248G5.8 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-248G5.8 RNA is bound by 9 proteins.

eCLIP assay for RP11-248G5.8 is not avaliable on ENCORE database.

9 proteins are bound to RP11-248G5.8 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	52768381	52768466	-	intron-Distal	4.47515	5.51215	K562	RBM15
chr13	52857911	52857998	-	intron-Distal	3.91778	3.86679	K562	SAFB2
chr13	52858862	52858952	-	intron-Distal	4.11172	4.37667	K562	SAFB2
chr13	52754705	52754768	-	intron-Distal,intron-Proximal	3.37282	4.85828	HepG2	BCLAF1
chr13	52749780	52749880	-	intron-Distal	4.04232	6.22576	HepG2	BCLAF1
chr13	52768421	52768512	-	intron-Distal	4.66127	5.42508	HepG2	RBM15
chr13	52857496	52857547	-	intron-Distal,intron-Proximal	4.97287	5.58150	K562	SF3B4
chr13	52814030	52814074	-	intron-Distal	5.61175	11.33143	K562	EXOSC5
chr13	52857649	52857745	-	intron-Distal	4.09007	4.54401	K562	KHSRP
chr13	52743376	52743447	-	intron-Distal	3.18200	9.34380	HepG2	U2AF2
chr13	52746312	52746396	-	intron-Distal	3.05728	3.87462	HepG2	QKI
chr13	52749326	52749482	-	intron-Distal	3.92378	3.42844	K562	KHSRP
chr13	52862064	52862175	-	intron-Distal	4.43832	5.84943	K562	SAFB2
chr13	52743396	52743447	-	intron-Distal	4.23893	4.96173	HepG2	U2AF1
chr13	52813547	52813594	-	intron-Distal	4.89449	6.41304	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-248G5.8 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-248G5.8 is not available on ENCORE database.
17 RBPs can affect the levels of RP11-248G5.8.

The Knockdown/knockout RNA-Seq assay for RP11-248G5.8 is not available on ENCORE database.

17 RBPs can affect the gene expression of RP11-248G5.8 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-248G5.8	ENSG00000217576.7	114.01020	182.24050	-0.67670	2.95390	2.27850	K562	AKAP8L
RP11-248G5.8	ENSG00000217576.7	136.12500	214.53880	-0.65630	2.52590	1.80060	K562	GRSF1
RP11-248G5.8	ENSG00000217576.7	74.19990	189.54940	-1.35310	5.32400	3.44100	K562	HNRNPA2B1
RP11-248G5.8	ENSG00000217576.7	23.12650	67.47200	-1.54470	3.95580	2.82800	K562	HNRNPM
RP11-248G5.8	ENSG00000217576.7	43.30640	138.09070	-1.67300	7.08490	5.65390	K562	HNRNPU
RP11-248G5.8	ENSG00000217576.7	126.70800	193.42300	-0.61030	2.54500	1.75820	K562	KIF1C
RP11-248G5.8	ENSG00000217576.7	133.88540	216.67980	-0.69460	3.60530	2.54700	K562	MBNL1
RP11-248G5.8	ENSG00000217576.7	35.77160	165.82800	-2.21280	9.63620	7.39530	K562	PABPN1
RP11-248G5.8	ENSG00000217576.7	78.13770	180.77380	-1.21010	3.00510	2.44340	K562	PUS1
RP11-248G5.8	ENSG00000217576.7	70.51720	204.01680	-1.53260	6.42220	3.79870	K562	RBM39
RP11-248G5.8	ENSG00000217576.7	32.17490	151.66880	-2.23690	6.96770	4.76440	K562	SF1
RP11-248G5.8	ENSG00000217576.7	45.52350	125.56410	-1.46370	6.49210	5.14240	K562	SF3B4
RP11-248G5.8	ENSG00000217576.7	54.05250	174.15920	-1.68800	6.89050	4.64850	K562	SNRNP200
RP11-248G5.8	ENSG00000217576.7	61.82420	117.07760	-0.92120	2.79820	1.69820	K562	U2AF1
RP11-248G5.8	ENSG00000217576.7	55.41640	120.86480	-1.12500	4.82910	3.77080	K562	U2AF2
RP11-248G5.8	ENSG00000217576.7	158.18280	104.08630	0.60370	2.33260	1.52810	K562	WDR3
RP11-248G5.8	ENSG00000217576.7	80.42100	204.97500	-1.34980	5.24330	2.70350	K562	YTHDC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-248G5.8

General Information

Functions

Localization

Domains (AlphaFold: RP11-248G5.8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-248G5.8 is not avaliable on ENCORE database.

9 proteins are bound to RP11-248G5.8 RNA:

eCLIP assay for RP11-248G5.8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-248G5.8 is not available on ENCORE database.

17 RBPs can affect the gene expression of RP11-248G5.8 :

The Knockdown/knockout RNA-Seq assay for RP11-248G5.8 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-248G5.8 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-248G5.8 is not avaliable on ENCORE database.