POLR1A

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	POLR1A	ENSG00000068654.15	18.81	16.44	17.62	ENCSR000AEF
HepG2	POLR1A	ENSG00000068654.15	25.28	26.26	25.77	ENCSR985KAT
K562	POLR1A	ENSG00000068654.15	20.69	23.32	22.01	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for POLR1A is not avaliable on ENCORE database.

Proteins bound to RNA

POLR1A RNA is bound by 32 proteins.

eCLIP assay for POLR1A is not avaliable on ENCORE database.

32 proteins are bound to POLR1A RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	86316939	86317000	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.57736	8.06490	HepG2	PPIG
chr2	86315752	86315816	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.19570	4.72775	HepG2	U2AF1
chr2	86253722	86253768	-	3'-UTR,intron-Distal	4.42915	6.14808	K562	UPF1
chr2	86254226	86254284	-	3'-UTR,intron-Distal	4.36081	4.13543	HepG2	FXR2
chr2	86253606	86253694	-	3'-UTR,intron-Distal	3.34196	5.35143	K562	UPF1
chr2	86251256	86251305	-	3'-UTR,intron-Distal	6.32081	6.06289	K562	PUM2
chr2	86315761	86315832	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.65948	5.30514	HepG2	BUD13
chr2	86253301	86253384	-	3'-UTR,intron-Distal,intron-Proximal	3.43467	4.40370	K562	AKAP1
chr2	86253284	86253356	-	3'-UTR,intron-Distal,intron-Proximal	3.77307	8.96255	HepG2	AKAP1
chr2	86252800	86252822	-	3'-UTR,intron-Distal	4.39294	3.54010	K562	UPF1
chr2	86253078	86253193	-	3'-UTR,intron-Distal	5.22805	16.89434	K562	UPF1
chr2	86253069	86253156	-	3'-UTR,intron-Distal	4.08558	5.09764	HepG2	NKRF
chr2	86250744	86250782	-	3'-UTR,intron-Distal	3.45721	5.35827	HepG2	HNRNPC
chr2	86253631	86253774	-	3'-UTR,intron-Distal	4.69615	17.89224	HepG2	UPF1
chr2	86254235	86254295	-	3'-UTR,intron-Distal	4.48728	8.85840	K562	UPF1
chr2	86254130	86254189	-	3'-UTR,intron-Distal	3.32073	3.63681	K562	RBM15
chr2	86310162	86310245	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.24303	4.68690	HepG2	PRPF8
chr2	86315670	86315747	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.64495	6.26332	HepG2	GRWD1
chr2	86253670	86253782	-	3'-UTR,intron-Distal	4.68258	9.77766	HepG2	AKAP1
chr2	86316943	86316986	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.93056	5.68196	HepG2	BCLAF1
chr2	86253903	86253968	-	3'-UTR,intron-Distal	3.85421	8.04798	K562	UPF1
chr2	86253903	86253999	-	3'-UTR,intron-Distal	3.13063	5.92343	HepG2	AKAP1
chr2	86253834	86253868	-	3'-UTR,intron-Distal	4.25984	4.13758	HepG2	AKAP1
chr2	86251458	86251514	-	3'-UTR,intron-Distal	3.87200	5.11028	HepG2	PCBP2
chr2	86254015	86254090	-	3'-UTR,intron-Distal	4.25502	6.61524	HepG2	UPF1
chr2	86253326	86253438	-	3'-UTR,intron-Distal,intron-Proximal	3.01168	8.46319	K562	UPF1
chr2	86254245	86254323	-	3'-UTR,intron-Distal	4.20702	10.99736	HepG2	AKAP1
chr2	86254122	86254177	-	3'-UTR,intron-Distal	4.02301	6.36332	HepG2	UPF1
chr2	86315873	86315929	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.29931	5.01842	HepG2	PRPF8
chr2	86251944	86252059	-	3'-UTR,intron-Distal	4.74548	7.92165	K562	AKAP1
chr2	86310207	86310295	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.20368	3.65452	K562	BUD13
chr2	86251780	86251857	-	3'-UTR,intron-Distal	3.09514	5.09741	K562	UPF1
chr2	86315770	86315811	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.64671	5.68502	HepG2	PRPF8
chr2	86252920	86252980	-	3'-UTR,intron-Distal	3.97318	5.99105	K562	UPF1
chr2	86317000	86317054	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.91475	8.58713	HepG2	PPIG
chr2	86253814	86253986	-	3'-UTR,intron-Distal	5.77398	26.58750	HepG2	UPF1
chr2	86254234	86254322	-	3'-UTR,intron-Distal	5.84240	15.66923	HepG2	UPF1
chr2	86250782	86250801	-	3'-UTR,intron-Distal	4.06526	4.04854	HepG2	HNRNPC
chr2	86315679	86315757	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.04753	11.83519	HepG2	PPIG
chr2	86315644	86315691	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.19737	4.49024	K562	AQR
chr2	86254244	86254323	-	3'-UTR,intron-Distal	4.47515	5.51215	K562	RBM15
chr2	86253288	86253386	-	3'-UTR,intron-Distal,intron-Proximal	4.41881	14.13313	HepG2	UPF1
chr2	86308693	86308743	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.54181	4.35676	HepG2	PRPF8
chr2	86315763	86315795	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.54216	5.90680	HepG2	PPIG
chr2	86332822	86332942	-	5'-UTR,CDS,intron-Distal	3.55185	6.59473	HepG2	GRWD1
chr2	86265831	86265883	-	CDS,intron-Distal	4.80210	5.44291	K562	LIN28B
chr2	86304981	86305014	-	CDS,intron-Distal,intron-Proximal	3.51793	4.13746	HepG2	PPIG
chr2	86297162	86297258	-	CDS,intron-Distal	3.63607	6.18214	HepG2	GRWD1
chr2	86260750	86260830	-	CDS,intron-Distal,intron-Proximal	3.38929	3.30791	HepG2	SRSF9
chr2	86259489	86259655	-	CDS,intron-Distal,intron-Proximal	4.77041	7.76905	K562	GTF2F1
chr2	86265869	86265965	-	CDS,intron-Distal	3.89512	5.53098	HepG2	FXR2
chr2	86267470	86267523	-	CDS,intron-Distal,intron-Proximal	3.95876	5.59977	HepG2	AQR
chr2	86305236	86305274	-	CDS,intron-Distal,intron-Proximal	3.95316	6.06308	HepG2	PPIG
chr2	86280002	86280069	-	CDS,intron-Distal	4.03376	4.28220	HepG2	GRWD1
chr2	86258546	86258626	-	CDS,intron-Distal,intron-Proximal	3.23235	4.96885	HepG2	G3BP1
chr2	86305072	86305108	-	CDS,intron-Distal,intron-Proximal	3.49859	4.74886	HepG2	BCLAF1
chr2	86267453	86267524	-	CDS,intron-Distal,intron-Proximal	5.18371	12.43500	HepG2	PRPF8
chr2	86302275	86302353	-	CDS,intron-Distal	4.00126	6.18214	HepG2	GRWD1
chr2	86258627	86258741	-	CDS,intron-Distal,intron-Proximal	4.51288	9.63918	HepG2	G3BP1
chr2	86276239	86276293	-	CDS,intron-Distal,intron-Proximal	3.66437	5.43815	HepG2	PRPF8
chr2	86265849	86265960	-	CDS,intron-Distal	4.95030	6.59793	K562	UCHL5
chr2	86265831	86265889	-	CDS,intron-Distal	4.47705	7.73669	HepG2	LIN28B
chr2	86257271	86257339	-	CDS,intron-Distal,intron-Proximal	3.97504	4.16174	HepG2	PRPF8
chr2	86259409	86259474	-	CDS,intron-Distal	4.24931	8.23108	K562	UCHL5
chr2	86258642	86258751	-	CDS,intron-Distal	3.43904	4.00731	K562	UCHL5
chr2	86280069	86280121	-	CDS,intron-Distal	3.12782	3.60157	HepG2	GRWD1
chr2	86254946	86255009	-	CDS,intron-Distal,intron-Proximal	5.47385	6.44303	K562	AQR
chr2	86267516	86267562	-	CDS,intron-Distal	3.65776	6.41974	HepG2	PPIG
chr2	86302275	86302332	-	CDS,intron-Distal	4.15962	4.48692	K562	YBX3
chr2	86276284	86276300	-	CDS,intron-Distal	4.52390	3.49905	HepG2	PPIG
chr2	86269181	86269244	-	CDS,intron-Distal,intron-Proximal	3.78572	4.40430	HepG2	AQR
chr2	86259424	86259515	-	CDS,intron-Distal,intron-Proximal	4.49869	5.02679	K562	BUD13
chr2	86302281	86302340	-	CDS,intron-Distal	3.04745	3.13705	K562	BUD13
chr2	86292521	86292582	-	CDS,intron-Distal	4.19252	3.96931	HepG2	G3BP1
chr2	86259489	86259504	-	CDS,intron-Distal	4.07736	3.49905	HepG2	PPIG
chr2	86258446	86258465	-	CDS,intron-Distal,intron-Proximal	3.64610	9.52203	HepG2	PRPF8
chr2	86257438	86257536	-	CDS,intron-Distal,intron-Proximal	3.48755	4.54206	HepG2	PRPF8
chr2	86297258	86297365	-	CDS,intron-Distal	3.49811	5.35682	HepG2	GRWD1
chr2	86266526	86266586	-	CDS,intron-Distal,intron-Proximal	3.89881	3.83925	K562	YBX3
chr2	86297161	86297210	-	CDS,intron-Distal	3.71507	4.46864	HepG2	BCLAF1
chr2	86258418	86258454	-	CDS,intron-Distal,intron-Proximal	5.14061	6.90190	HepG2	AQR
chr2	86271272	86271329	-	CDS,intron-Distal	4.42358	4.50566	HepG2	FXR2
chr2	86270079	86270099	-	CDS,intron-Distal,intron-Proximal	4.82472	6.03362	HepG2	AQR
chr2	86272364	86272520	-	CDS,intron-Distal,intron-Proximal	3.32390	6.65588	K562	AQR
chr2	86276020	86276072	-	CDS,intron-Distal	4.24542	3.61890	HepG2	G3BP1
chr2	86266559	86266649	-	CDS,intron-Distal,intron-Proximal	4.00398	5.90528	HepG2	AQR
chr2	86281261	86281303	-	CDS,intron-Distal,intron-Proximal	4.05112	6.64430	HepG2	PPIG
chr2	86266522	86266599	-	CDS,intron-Distal,intron-Proximal	4.08345	4.16174	HepG2	PRPF8
chr2	86269967	86270100	-	CDS,intron-Distal,intron-Proximal	6.38060	18.07825	K562	AQR
chr2	86297223	86297243	-	CDS,intron-Distal	3.97044	3.20743	HepG2	PPIG
chr2	86269108	86269190	-	CDS,intron-Distal	3.05398	4.87174	HepG2	PPIG
chr2	86325754	86325839	-	CDS,intron-Distal	3.10621	6.68279	HepG2	PPIG
chr2	86305063	86305105	-	CDS,intron-Distal,intron-Proximal	3.34374	5.30095	HepG2	PPIG
chr2	86272430	86272543	-	CDS,intron-Distal,intron-Proximal	3.43309	5.70176	HepG2	AQR
chr2	86305236	86305305	-	CDS,intron-Distal,intron-Proximal	3.86128	7.89209	HepG2	BCLAF1
chr2	86304984	86305016	-	CDS,intron-Distal	3.46756	5.53855	K562	YBX3
chr2	86308041	86308094	-	CDS,intron-Distal	3.57344	3.24162	HepG2	G3BP1
chr2	86258439	86258454	-	CDS,intron-Distal,intron-Proximal	6.14643	14.81397	K562	AQR
chr2	86258624	86258722	-	CDS,intron-Distal,intron-Proximal	3.46439	5.20920	HepG2	FXR2
chr2	86258673	86258723	-	CDS,intron-Distal	3.87282	5.35703	HepG2	BCLAF1
chr2	86302225	86302384	-	CDS,intron-Distal,intron-Proximal	3.38728	4.59965	HepG2	PRPF4
chr2	86259474	86259507	-	CDS,intron-Distal,intron-Proximal	4.50703	5.29868	K562	UCHL5
chr2	86280001	86280097	-	CDS,intron-Distal	3.48256	7.62584	HepG2	BUD13
chr2	86258568	86258647	-	CDS,intron-Distal,intron-Proximal	3.41400	4.41873	K562	ZNF800
chr2	86272421	86272485	-	CDS,intron-Distal,intron-Proximal	3.08645	3.13705	K562	BUD13
chr2	86297231	86297328	-	CDS,intron-Distal	3.18808	3.69775	K562	YBX3
chr2	86257489	86257535	-	CDS,intron-Distal,intron-Proximal	4.23251	3.25089	HepG2	AQR
chr2	86302231	86302243	-	CDS,intron-Distal	3.73935	4.74241	K562	YBX3
chr2	86254955	86255010	-	CDS,intron-Distal,intron-Proximal	3.73922	7.09156	HepG2	PRPF8
chr2	86279891	86279952	-	CDS,intron-Distal,intron-Proximal	4.02274	5.73990	HepG2	PRPF8
chr2	86276127	86276167	-	CDS,intron-Distal,intron-Proximal	4.39447	7.35664	HepG2	BUD13
chr2	86260735	86260816	-	CDS,intron-Distal,intron-Proximal	4.50438	12.15723	HepG2	PRPF8
chr2	86327099	86327136	-	CDS,intron-Distal	3.26718	3.05161	HepG2	PPIG
chr2	86269179	86269259	-	CDS,intron-Distal,intron-Proximal	4.28659	6.01372	K562	AQR
chr2	86259400	86259472	-	CDS,intron-Distal	3.15336	6.69553	HepG2	PPIG
chr2	86297101	86297151	-	CDS,intron-Distal,intron-Proximal	4.03457	7.26133	HepG2	PRPF8
chr2	86266556	86266627	-	CDS,intron-Distal,intron-Proximal	5.35334	6.44303	K562	AQR
chr2	86325732	86325754	-	CDS,intron-Distal,intron-Proximal	4.93096	6.21892	HepG2	PPIG
chr2	86267539	86267587	-	CDS,intron-Distal	4.25086	4.42709	HepG2	G3BP1
chr2	86302243	86302275	-	CDS,intron-Distal	4.14153	7.49884	K562	YBX3
chr2	86297142	86297223	-	CDS,intron-Distal	3.69000	9.97127	HepG2	PPIG
chr2	86302195	86302275	-	CDS,intron-Distal	3.93350	5.97027	HepG2	GRWD1
chr2	86272475	86272533	-	CDS,intron-Distal,intron-Proximal	4.07251	4.45914	HepG2	PRPF8
chr2	86274241	86274348	-	CDS,intron-Distal,intron-Proximal	5.40652	9.10443	HepG2	PRPF8
chr2	86270050	86270106	-	CDS,intron-Distal,intron-Proximal	4.30223	5.64484	HepG2	PRPF8
chr2	86275988	86276008	-	CDS,intron-Distal,intron-Proximal	4.65307	4.65563	K562	AQR
chr2	86258647	86258747	-	CDS,intron-Distal	3.92392	3.14726	K562	SRSF7
chr2	86269062	86269142	-	CDS,intron-Distal	3.45776	4.65365	HepG2	GRWD1
chr2	86265833	86265920	-	CDS,intron-Distal	3.74542	5.41973	HepG2	G3BP1
chr2	86302187	86302343	-	CDS,intron-Distal	3.93632	3.84295	K562	GRWD1
chr2	86260762	86260820	-	CDS,intron-Distal,intron-Proximal	4.57080	4.07072	K562	UCHL5
chr2	86272487	86272596	-	intron-Distal,intron-Proximal	3.33668	5.82400	HepG2	SF3B4
chr2	86258351	86258399	-	intron-Distal,intron-Proximal	3.60196	3.52699	HepG2	PRPF8
chr2	86267331	86267422	-	intron-Distal,intron-Proximal	4.67691	3.12843	K562	PRPF8
chr2	86297057	86297141	-	intron-Distal,intron-Proximal	4.88889	4.48002	K562	AQR
chr2	86276240	86276261	-	intron-Distal,intron-Proximal	4.02794	3.77687	HepG2	SSB
chr2	86268462	86268517	-	intron-Distal	3.79882	6.80551	HepG2	HNRNPL
chr2	86270056	86270079	-	intron-Distal,intron-Proximal	3.78572	4.90219	HepG2	AQR
chr2	86265816	86265823	-	intron-Distal,intron-Proximal	4.04529	10.21736	HepG2	PRPF8
chr2	86259550	86259658	-	intron-Distal,intron-Proximal	5.49960	6.62861	HepG2	FAM120A
chr2	86276272	86276283	-	intron-Distal,intron-Proximal	3.06807	3.37628	HepG2	SSB
chr2	86302056	86302145	-	intron-Distal,intron-Proximal	3.67461	7.49348	HepG2	RBM22
chr2	86276435	86276486	-	intron-Distal,intron-Proximal	4.40886	4.45977	HepG2	U2AF2
chr2	86268664	86268742	-	intron-Distal	4.26993	4.03748	HepG2	AGGF1
chr2	86258364	86258403	-	intron-Distal,intron-Proximal	4.84602	4.86944	K562	AQR
chr2	86259546	86259729	-	intron-Distal,intron-Proximal	6.11957	19.24847	HepG2	RBFOX2
chr2	86265778	86265816	-	intron-Distal,intron-Proximal	4.20068	11.83008	HepG2	PRPF8
chr2	86268217	86268269	-	intron-Distal	4.72020	5.04227	HepG2	HNRNPL
chr2	86258403	86258439	-	intron-Distal,intron-Proximal	6.45075	18.99425	K562	AQR
chr2	86271433	86271490	-	intron-Distal,intron-Proximal	3.42607	5.60181	HepG2	SF3B4
chr2	86281172	86281263	-	intron-Distal,intron-Proximal	4.00797	6.79537	K562	AQR
chr2	86258399	86258446	-	intron-Distal,intron-Proximal	4.99502	17.45859	HepG2	PRPF8
chr2	86259556	86259624	-	intron-Distal,intron-Proximal	4.24937	4.13073	HepG2	GTF2F1
chr2	86275932	86275988	-	intron-Distal,intron-Proximal	4.86059	4.65563	K562	AQR
chr2	86268466	86268510	-	intron-Distal	4.16387	3.80954	K562	HNRNPL
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for POLR1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for POLR1A is not available on ENCORE database.
139 RBPs can affect the levels of POLR1A.

The Knockdown/knockout RNA-Seq assay for POLR1A is not available on ENCORE database.

139 RBPs can affect the gene expression of POLR1A :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
POLR1A	ENSG00000068654.11	2965.31500	2319.64570	0.35420	2.75030	1.81020	HepG2	ABCF1
POLR1A	ENSG00000068654.11	2740.72900	2102.39680	0.38240	7.87700	6.95740	HepG2	ACO1
POLR1A	ENSG00000068654.11	3573.53160	2145.64310	0.73580	8.46430	7.58970	HepG2	AKAP1
POLR1A	ENSG00000068654.11	1787.23480	2112.19740	-0.24100	2.80450	2.03340	HepG2	AKAP8L
POLR1A	ENSG00000068654.11	1403.26530	1775.27770	-0.33930	2.36290	1.63320	HepG2	ASCC1
POLR1A	ENSG00000068654.11	2519.54370	3459.94870	-0.45760	10.26010	9.07620	HepG2	AUH
POLR1A	ENSG00000068654.11	1474.96160	2011.32190	-0.44750	3.65700	2.63420	HepG2	BCLAF1
POLR1A	ENSG00000068654.11	2971.77080	2101.84720	0.49960	14.56790	13.29250	HepG2	CKAP4
POLR1A	ENSG00000068654.11	1621.08100	2285.12780	-0.49530	5.40750	4.47650	HepG2	CPSF6
POLR1A	ENSG00000068654.11	2770.59630	2269.37900	0.28780	3.92500	3.18380	HepG2	CELF1
POLR1A	ENSG00000068654.11	1181.85940	1765.79860	-0.57930	4.94170	4.13760	HepG2	DDX6
POLR1A	ENSG00000068654.11	926.01640	1536.09110	-0.73020	14.94340	13.42330	HepG2	DNAJC21
POLR1A	ENSG00000068654.11	1879.59760	1443.02620	0.38120	3.06430	2.09700	HepG2	EEF2
POLR1A	ENSG00000068654.11	1653.39440	1202.96740	0.45870	4.15260	2.79110	HepG2	EFTUD2
POLR1A	ENSG00000068654.11	1223.15880	1599.86010	-0.38730	2.33940	1.32800	HepG2	AGO1
POLR1A	ENSG00000068654.11	1319.37480	1697.19470	-0.36330	2.62090	2.04360	HepG2	EIF2S1
POLR1A	ENSG00000068654.11	2294.83170	1759.67360	0.38300	4.27250	2.82880	HepG2	EIF2S2
POLR1A	ENSG00000068654.11	1720.36570	1171.40920	0.55440	5.51600	4.27100	HepG2	EIF3D
POLR1A	ENSG00000068654.11	2910.60010	1875.44960	0.63400	6.34780	5.38260	HepG2	EIF4A3
POLR1A	ENSG00000068654.11	3428.00990	1826.29990	0.90830	10.02130	8.75400	HepG2	EIF4B
POLR1A	ENSG00000068654.11	1782.60370	2306.07510	-0.37150	3.26980	2.38820	HepG2	EIF4G2
POLR1A	ENSG00000068654.11	2954.36000	3972.49990	-0.42720	9.43910	8.43760	HepG2	ETF1
POLR1A	ENSG00000068654.11	2471.77330	2054.33500	0.26680	2.34910	1.58040	HepG2	EWSR1
POLR1A	ENSG00000068654.11	3091.39780	2342.29160	0.40020	3.18390	2.36480	HepG2	FIP1L1
POLR1A	ENSG00000068654.11	1481.07030	1894.36580	-0.35510	2.52330	1.30950	HepG2	FKBP4
POLR1A	ENSG00000068654.11	1424.75090	1138.59830	0.32340	2.51400	1.76330	HepG2	FUBP3
POLR1A	ENSG00000068654.11	2915.23320	1892.70420	0.62310	7.27010	6.18540	HepG2	FXR1
POLR1A	ENSG00000068654.11	2357.55290	1864.02360	0.33880	2.55590	1.70230	HepG2	G3BP2
POLR1A	ENSG00000068654.11	1718.10380	2007.13090	-0.22430	2.55180	1.60760	HepG2	HDGF
POLR1A	ENSG00000068654.11	2481.10020	2913.24270	-0.23160	3.19430	2.42710	HepG2	HNRNPF
POLR1A	ENSG00000068654.11	1865.96920	2222.73720	-0.25240	3.82790	3.04300	HepG2	HNRNPL
POLR1A	ENSG00000068654.11	1693.69280	2472.01160	-0.54550	6.04420	5.15120	HepG2	HNRNPLL
POLR1A	ENSG00000068654.11	1965.39010	1616.09750	0.28220	2.45590	1.55780	HepG2	HNRNPM
POLR1A	ENSG00000068654.11	1958.86930	1713.56150	0.19290	2.06050	1.52800	HepG2	HNRNPU
POLR1A	ENSG00000068654.11	2454.89770	2868.69760	-0.22470	2.08240	1.44840	HepG2	IGF2BP1
POLR1A	ENSG00000068654.11	2923.13040	1784.36450	0.71200	9.57730	8.40700	HepG2	IGF2BP2
POLR1A	ENSG00000068654.11	1643.89270	1921.79660	-0.22530	2.99650	1.93990	HepG2	KIF1C
POLR1A	ENSG00000068654.11	4185.89070	2837.20290	0.56100	4.79590	3.69070	HepG2	LARP4
POLR1A	ENSG00000068654.11	2721.82770	1893.36700	0.52350	5.13590	4.25020	HepG2	MAGOH
POLR1A	ENSG00000068654.11	3815.42150	1903.89010	1.00280	15.67440	14.26390	HepG2	MATR3
POLR1A	ENSG00000068654.11	1841.54720	1225.98090	0.58690	3.53320	2.34910	HepG2	METAP2
POLR1A	ENSG00000068654.11	1553.66880	2521.19800	-0.69840	5.27950	3.91480	HepG2	MTPAP
POLR1A	ENSG00000068654.11	1246.05120	1591.84050	-0.35330	3.17400	1.87070	HepG2	NAA15
POLR1A	ENSG00000068654.11	3260.97570	1948.67730	0.74270	9.53180	8.39640	HepG2	NCBP2
POLR1A	ENSG00000068654.11	1409.66300	2191.93340	-0.63690	8.27100	7.02820	HepG2	NSUN2
POLR1A	ENSG00000068654.11	2206.87790	1735.14830	0.34680	2.47100	1.78470	HepG2	PABPC4
POLR1A	ENSG00000068654.11	2052.93020	1696.15900	0.27530	3.44940	2.51370	HepG2	PARN
POLR1A	ENSG00000068654.11	3100.56520	1714.00610	0.85510	8.21210	7.25730	HepG2	PCBP1
POLR1A	ENSG00000068654.11	1212.96450	1528.36370	-0.33350	3.78560	2.93550	HepG2	PPIL4
POLR1A	ENSG00000068654.11	1863.38230	2194.67890	-0.23610	2.75090	1.97890	HepG2	PRPF4
POLR1A	ENSG00000068654.11	2691.28240	1744.17310	0.62570	16.38680	15.26960	HepG2	PTBP1
POLR1A	ENSG00000068654.11	1846.00990	2309.73360	-0.32330	2.97560	2.36100	HepG2	PUF60
POLR1A	ENSG00000068654.11	3951.92070	2451.89560	0.68860	31.98030	30.41520	HepG2	PUM1
POLR1A	ENSG00000068654.11	1738.88410	2141.41400	-0.30040	4.58710	3.83190	HepG2	PUS1
POLR1A	ENSG00000068654.11	2548.18830	1888.75280	0.43190	6.66060	5.75280	HepG2	QKI
POLR1A	ENSG00000068654.11	1682.59660	2591.51590	-0.62310	11.48190	9.91920	HepG2	RBM15
POLR1A	ENSG00000068654.11	2156.30380	1714.25140	0.33090	3.39200	2.65160	HepG2	RBM25
POLR1A	ENSG00000068654.11	2507.21160	1928.22760	0.37870	2.89460	1.87890	HepG2	RBM27
POLR1A	ENSG00000068654.11	2998.48280	1941.00770	0.62730	13.16130	12.14150	HepG2	NELFE
POLR1A	ENSG00000068654.11	2460.46380	1807.94730	0.44450	9.01900	8.00260	HepG2	RECQL
POLR1A	ENSG00000068654.11	2635.81510	3138.49680	-0.25180	2.20210	1.58330	HepG2	RPLP0
POLR1A	ENSG00000068654.11	2239.52420	1139.84360	0.97430	21.73900	20.27350	HepG2	RPS19
POLR1A	ENSG00000068654.11	2390.96010	1778.26390	0.42700	3.71990	2.79580	HepG2	RPS2
POLR1A	ENSG00000068654.11	2349.70280	1815.30010	0.37220	2.82700	1.73990	HepG2	RPS5
POLR1A	ENSG00000068654.11	1269.13120	1526.01480	-0.26590	3.28040	2.58940	HepG2	SAFB2
POLR1A	ENSG00000068654.11	1609.56550	1143.99350	0.49250	4.77570	3.55480	HepG2	SERBP1
POLR1A	ENSG00000068654.11	4228.23820	2795.40600	0.59690	2.05580	1.47370	HepG2	SF3A3
POLR1A	ENSG00000068654.11	2475.39340	1815.71610	0.44700	8.97220	7.99970	HepG2	SF3B4
POLR1A	ENSG00000068654.11	2444.26750	1779.61220	0.45770	12.06850	10.87230	HepG2	SMN1
POLR1A	ENSG00000068654.11	4059.44560	1895.29340	1.09880	59.34900	57.80000	HepG2	SRSF1
POLR1A	ENSG00000068654.11	3137.48340	2280.53920	0.46010	10.27290	9.16910	HepG2	SRSF5
POLR1A	ENSG00000068654.11	2290.07450	2862.21560	-0.32170	5.50510	4.57980	HepG2	SRSF7
POLR1A	ENSG00000068654.11	2042.80670	1541.99010	0.40570	7.78980	6.94850	HepG2	SRSF9
POLR1A	ENSG00000068654.11	3691.60550	2593.58960	0.50920	7.82190	6.86330	HepG2	SUCLG1
POLR1A	ENSG00000068654.11	1107.67840	2265.64300	-1.03240	15.89970	14.51180	HepG2	SUPV3L1
POLR1A	ENSG00000068654.11	1985.29690	2409.52770	-0.27940	2.12130	1.47450	HepG2	TARDBP
POLR1A	ENSG00000068654.11	3129.21190	2388.51430	0.38960	3.12470	2.23520	HepG2	UBE2L3
POLR1A	ENSG00000068654.11	2028.18500	2479.09540	-0.28960	4.55610	3.69620	HepG2	UPF1
POLR1A	ENSG00000068654.11	1473.88850	2074.49620	-0.49310	3.25260	2.16000	HepG2	UPF2
POLR1A	ENSG00000068654.11	4089.17560	2393.47280	0.77260	31.22560	29.54640	HepG2	UTP3
POLR1A	ENSG00000068654.11	1372.41330	2230.27870	-0.70050	9.02160	7.72990	HepG2	XRN2
POLR1A	ENSG00000068654.11	1727.97680	2165.88220	-0.32590	5.72240	4.81050	HepG2	ZC3H8
POLR1A	ENSG00000068654.11	3437.89130	2726.53370	0.33440	8.06700	7.26020	HepG2	ZNF622
POLR1A	ENSG00000068654.11	2307.47430	1801.43420	0.35710	3.56370	2.20490	K562	AARS
POLR1A	ENSG00000068654.11	943.45640	1744.14910	-0.88650	6.49530	5.67840	K562	AGGF1
POLR1A	ENSG00000068654.11	1082.20250	1916.26830	-0.82430	6.06870	4.47300	K562	AKAP8
POLR1A	ENSG00000068654.11	985.20080	1814.79540	-0.88130	6.36090	5.34100	K562	AKAP8L
POLR1A	ENSG00000068654.11	5550.87920	4287.41520	0.37250	2.69580	1.47150	K562	APOBEC3C
POLR1A	ENSG00000068654.11	2412.09830	3822.16580	-0.66410	5.53270	4.75200	K562	AQR
POLR1A	ENSG00000068654.11	2128.49180	2616.29660	-0.29770	2.96190	1.97060	K562	BCLAF1
POLR1A	ENSG00000068654.11	1107.67280	2054.69490	-0.89140	14.15330	12.13290	K562	BOP1
POLR1A	ENSG00000068654.11	2312.98980	2858.26180	-0.30540	3.52810	1.79470	K562	CEBPZ
POLR1A	ENSG00000068654.11	1324.69020	2184.63620	-0.72170	13.26690	11.54030	K562	CPSF6
POLR1A	ENSG00000068654.11	2803.12420	3285.26480	-0.22900	2.97830	1.72270	K562	DDX21
POLR1A	ENSG00000068654.11	1056.20520	1444.91730	-0.45210	4.52360	3.14450	K562	DDX3X
POLR1A	ENSG00000068654.11	5841.49420	3966.70410	0.55830	8.14110	7.10100	K562	DDX47
POLR1A	ENSG00000068654.11	1106.93200	1464.90390	-0.40420	4.22750	2.50760	K562	DDX6
POLR1A	ENSG00000068654.11	2954.07670	4104.63480	-0.47450	10.01180	8.77430	K562	EIF2S2
POLR1A	ENSG00000068654.11	2593.97660	1592.80240	0.70350	4.80660	3.44080	K562	EIF3A
POLR1A	ENSG00000068654.11	2692.94030	1634.81710	0.72000	15.03760	13.12840	K562	EIF3G
POLR1A	ENSG00000068654.11	1847.14870	1509.50000	0.29110	2.19200	1.45780	K562	EIF4A3
POLR1A	ENSG00000068654.11	1254.23880	1748.97410	-0.47970	5.67110	3.29710	K562	FASTKD2
POLR1A	ENSG00000068654.11	2309.79050	3514.77720	-0.60570	8.91060	7.29290	K562	FIP1L1
POLR1A	ENSG00000068654.11	1330.80240	1711.24250	-0.36270	2.60220	1.51560	K562	FKBP4
POLR1A	ENSG00000068654.11	1420.01080	2222.99760	-0.64660	7.86560	6.38010	K562	FMR1
POLR1A	ENSG00000068654.11	1163.57630	1884.27000	-0.69540	8.46180	6.76690	K562	FTO
POLR1A	ENSG00000068654.11	1014.12930	1445.33090	-0.51120	3.66490	2.08840	K562	FUS
POLR1A	ENSG00000068654.11	4007.03060	1569.80250	1.35190	67.52770	64.84730	K562	FXR1
POLR1A	ENSG00000068654.11	1260.23050	1600.04290	-0.34440	3.10180	1.56450	K562	G3BP1
POLR1A	ENSG00000068654.11	574.02710	987.60100	-0.78280	3.22800	2.45570	K562	G3BP2
POLR1A	ENSG00000068654.11	2052.29070	2674.25480	-0.38190	3.06670	1.56050	K562	GEMIN5
POLR1A	ENSG00000068654.11	1277.02180	2085.71470	-0.70780	10.95100	9.34880	K562	GPKOW
POLR1A	ENSG00000068654.11	3463.72390	5469.95950	-0.65920	12.60390	10.96980	K562	GRSF1
POLR1A	ENSG00000068654.11	659.35950	1522.37900	-1.20720	8.47280	5.94130	K562	HNRNPA2B1
POLR1A	ENSG00000068654.11	2576.22060	4765.25300	-0.88730	17.98020	16.07650	K562	HSPD1
POLR1A	ENSG00000068654.11	1095.78210	1926.19960	-0.81380	5.69520	4.41470	K562	KIF1C
POLR1A	ENSG00000068654.11	1259.11280	1781.13750	-0.50040	3.44340	2.38900	K562	KRR1
POLR1A	ENSG00000068654.11	2746.44630	1758.83740	0.64280	5.16250	4.00740	K562	MAGOH
POLR1A	ENSG00000068654.11	1100.23970	1843.64570	-0.74470	5.12910	3.51310	K562	MAK16
POLR1A	ENSG00000068654.11	2831.82910	1755.17560	0.69000	12.64590	10.54850	K562	MATR3
POLR1A	ENSG00000068654.11	1619.87280	2035.92200	-0.32980	3.05170	2.13040	K562	METAP2
POLR1A	ENSG00000068654.11	931.94410	1512.43650	-0.69860	4.13130	2.99380	K562	NAA15
POLR1A	ENSG00000068654.11	1147.13190	1507.43840	-0.39410	3.64790	2.21620	K562	NCBP2
POLR1A	ENSG00000068654.11	2675.90610	3506.43290	-0.39000	12.15140	10.73950	K562	NSUN2
POLR1A	ENSG00000068654.11	676.19980	1331.79910	-0.97790	5.80920	4.21830	K562	PABPN1
POLR1A	ENSG00000068654.11	1971.19570	1564.81730	0.33300	2.92190	1.91810	K562	PCBP2
POLR1A	ENSG00000068654.11	2296.73890	3508.41980	-0.61120	7.18330	5.84370	K562	PCBP3
POLR1A	ENSG00000068654.11	1880.86160	2527.31170	-0.42620	3.64360	1.51560	K562	PES1
POLR1A	ENSG00000068654.11	2237.41250	3192.40210	-0.51280	5.27960	3.01210	K562	PKM
POLR1A	ENSG00000068654.11	2106.61630	2691.07220	-0.35330	4.01970	3.04810	K562	POLR2G
POLR1A	ENSG00000068654.11	2298.10630	3990.00710	-0.79590	13.83540	11.57540	K562	PPIG
POLR1A	ENSG00000068654.11	998.80080	1583.50710	-0.66490	2.89880	1.40100	K562	PPP1R8
POLR1A	ENSG00000068654.11	1310.22590	1767.39030	-0.43180	4.74290	3.51430	K562	PSIP1
POLR1A	ENSG00000068654.11	2964.07710	1708.86670	0.79440	17.24940	15.65770	K562	PTBP1
POLR1A	ENSG00000068654.11	775.90990	1800.28560	-1.21430	9.32950	8.38270	K562	PUS1
POLR1A	ENSG00000068654.11	1010.68670	1753.68730	-0.79510	5.58270	4.76590	K562	RBM15
POLR1A	ENSG00000068654.11	706.72680	937.37170	-0.40750	2.65820	1.35780	K562	RBM25
POLR1A	ENSG00000068654.11	891.06100	1638.49350	-0.87880	4.29550	2.26200	K562	RBM39
POLR1A	ENSG00000068654.11	2635.69670	1724.08810	0.61230	7.64100	5.74420	K562	NELFE
POLR1A	ENSG00000068654.11	1558.31220	859.21150	0.85880	2.44070	1.50730	K562	RPS3
POLR1A	ENSG00000068654.11	1785.67010	2653.96760	-0.57170	4.50770	2.79560	K562	RRP9
POLR1A	ENSG00000068654.11	3947.49620	2397.82740	0.71910	14.10410	11.85410	K562	SAFB
POLR1A	ENSG00000068654.11	787.11460	1218.04980	-0.62990	2.38740	1.30470	K562	SF1
POLR1A	ENSG00000068654.11	1300.55490	1983.86280	-0.60920	6.07370	4.59900	K562	SF3B1
POLR1A	ENSG00000068654.11	2480.32460	1675.32820	0.56600	8.84430	7.58870	K562	SRSF1
POLR1A	ENSG00000068654.11	1246.36970	1582.39240	-0.34440	2.70120	1.66750	K562	SRSF5
POLR1A	ENSG00000068654.11	2235.20310	2931.86610	-0.39140	6.71130	4.87410	K562	SRSF7
POLR1A	ENSG00000068654.11	1075.13710	1686.35040	-0.64940	12.27230	9.64250	K562	SSB
POLR1A	ENSG00000068654.11	3717.60540	4611.56990	-0.31090	2.75590	1.40190	K562	SSRP1
POLR1A	ENSG00000068654.11	3006.47270	4217.85100	-0.48840	4.99530	3.23390	K562	STAU1
POLR1A	ENSG00000068654.11	930.78770	1715.97390	-0.88250	3.50870	1.36470	K562	SUGP2
POLR1A	ENSG00000068654.11	704.73450	1673.18180	-1.24740	8.44200	5.55680	K562	SUPT6H
POLR1A	ENSG00000068654.11	1817.06610	2513.15800	-0.46790	4.04970	2.80300	K562	SUPV3L1
POLR1A	ENSG00000068654.11	4354.40680	2699.22300	0.68980	15.74990	13.82250	K562	SYNCRIP
POLR1A	ENSG00000068654.11	1460.55760	1805.91090	-0.30620	2.29080	1.44250	K562	TRIM56
POLR1A	ENSG00000068654.11	3017.56930	4111.42220	-0.44630	4.86540	2.90590	K562	TRIP6
POLR1A	ENSG00000068654.11	3256.63030	4514.68930	-0.47120	6.75240	4.74040	K562	TROVE2
POLR1A	ENSG00000068654.11	607.71570	957.97430	-0.65660	4.65250	3.16000	K562	U2AF1
POLR1A	ENSG00000068654.11	613.74870	989.16040	-0.68860	9.41450	7.93060	K562	U2AF2
POLR1A	ENSG00000068654.11	1585.54640	2659.88520	-0.74640	10.75180	8.69760	K562	UCHL5
POLR1A	ENSG00000068654.11	2777.03800	3717.93970	-0.42100	5.03910	4.10050	K562	UPF1
POLR1A	ENSG00000068654.11	1030.77040	1824.78960	-0.82400	5.30660	3.33180	K562	UTP18
POLR1A	ENSG00000068654.11	2095.01790	3181.33260	-0.60270	3.01310	2.10160	K562	WDR3
POLR1A	ENSG00000068654.11	4034.22470	3308.15490	0.28620	5.50490	4.35230	K562	WDR43
POLR1A	ENSG00000068654.11	3207.73470	2087.29150	0.61980	2.94000	1.30270	K562	XRCC6
POLR1A	ENSG00000068654.11	927.69410	1646.17430	-0.82740	4.11860	1.99180	K562	YTHDC2
POLR1A	ENSG00000068654.11	2914.00520	4306.36630	-0.56350	4.32100	3.20510	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for POLR1A is not available on ENCORE database.

3 RBPs can affect the splicing of POLR1A :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	POLR1A	ENSG00000068654.11	chr2	-	86271261	86271427	86270096	86270318	86272739	86272892	-0.27200	0.00000	0.00005	excluded	HepG2	U2AF1
SE	POLR1A	ENSG00000068654.11	chr2	-	86271261	86271427	86270096	86270318	86272400	86272483	-0.05800	0.01111	0.08828	excluded	K562	AQR
SE	POLR1A	ENSG00000068654.11	chr2	-	86261050	86261195	86260783	86260910	86265822	86265980	-0.05200	0.00142	0.05180	excluded	K562	FXR1
A3SS	POLR1A	ENSG00000068654.11	chr2	-	86279939	86280165	86279939	86280123	86281262	86281412	0.12500	0.00004	0.00037	longer	K562	AQR
A3SS	POLR1A	ENSG00000068654.11	chr2	-	86308723	86308874	86308723	86308829	86310204	86310291	0.08300	0.00550	0.03143	longer	K562	AQR
A3SS	POLR1A	ENSG00000068654.11	chr2	-	86305236	86305459	86305236	86305407	86307938	86308101	0.07500	0.00001	0.00010	longer	K562	AQR
A3SS	POLR1A	ENSG00000068654.11	chr2	-	86315907	86316020	86315907	86315993	86316944	86317052	0.13400	0.00076	0.00547	longer	K562	AQR
A3SS	POLR1A	ENSG00000068654.11	chr2	-	86281262	86281434	86281262	86281412	86292396	86292588	0.07500	0.00012	0.00101	longer	K562	AQR
A3SS	POLR1A	ENSG00000068654.11	chr2	-	86276282	86276477	86276282	86276365	86279939	86280165	0.13400	0.00003	0.00026	longer	K562	AQR
A3SS	POLR1A	ENSG00000068654.11	chr2	-	86276282	86276477	86276282	86276365	86279939	86280123	0.05400	0.00125	0.04820	longer	HepG2	U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

POLR1A

General Information

Functions

Localization

Domains (AlphaFold: POLR1A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for POLR1A is not avaliable on ENCORE database.

32 proteins are bound to POLR1A RNA:

eCLIP assay for POLR1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for POLR1A is not available on ENCORE database.

139 RBPs can affect the gene expression of POLR1A :

The Knockdown/knockout RNA-Seq assay for POLR1A is not available on ENCORE database.

3 RBPs can affect the splicing of POLR1A :

The Knockdown/knockout RNA-Seq assay for POLR1A is not avaliable on ENCORE database.