PPP1R16A

General Information

Gene Name       : PPP1R16A
Gene ID             : ENSG00000160972.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PPP1R16A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PPP1R16AENSG00000160972.90.010.990.50ENCSR000AEF
HepG2PPP1R16AENSG00000160972.930.991.9616.47ENCSR985KAT
K562PPP1R16AENSG00000160972.915.983.529.75ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPP1R16A is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPP1R16A RNA is bound by 11 proteins.  







eCLIP assay for PPP1R16A is not avaliable on ENCORE database.





11 proteins are bound to PPP1R16A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8145726105145726145+3'-UTR,CDS,intron-Proximal4.771414.97342HepG2PPIG
chr8145726224145726266+3'-UTR,CDS,intron-Proximal4.974705.27053HepG2PPIG
chr8145721843145721938+3'-UTR,intron-Proximal4.382009.27186HepG2PPIG
chr8145722058145722096+3'-UTR4.313734.08604HepG2PPIG
chr8145727307145727398+3'-UTR3.825273.07786HepG2UPF1
chr8145725833145725891+3'-UTR,CDS,intron-Proximal4.144084.15208K562RBM15
chr8145725782145725852+3'-UTR,intron-Proximal3.043563.23179HepG2RBFOX2
chr8145724306145724368+CDS4.476515.21253K562LIN28B
chr8145726888145726944+CDS,intron-Proximal3.838265.59977HepG2AQR
chr8145724153145724223+CDS3.799009.02617HepG2PPIG
chr8145724147145724215+CDS,intron-Proximal4.525915.24155K562BUD13
chr8145724390145724443+CDS5.212097.35950HepG2PPIG
chr8145725602145725664+CDS,intron-Proximal3.195074.24089HepG2PRPF8
chr8145722830145722885+CDS,intron-Proximal4.743035.68502HepG2PRPF8
chr8145726948145727114+CDS3.5460110.18663HepG2LARP4
chr8145726672145726717+CDS,intron-Proximal4.050986.49379HepG2AQR
chr8145726737145726812+intron-Distal,intron-Proximal3.585304.88774HepG2RBM15
chr8145723926145724005+intron-Distal3.091953.67092K562PRPF8
chr8145723699145723783+intron-Distal3.984243.18939HepG2RBFOX2
chr8145723688145723764+intron-Distal3.359903.04054K562GTF2F1
chr8145723547145723637+intron-Distal4.412914.42836K562AKAP8L
chr8145726855145726888+intron-Proximal3.7881210.75532HepG2AQR
chr8145726828145726855+intron-Proximal3.487207.81968HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPP1R16A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPP1R16A is not available on ENCORE database.

  • 112 RBPs can affect the levels of PPP1R16A.  








The Knockdown/knockout RNA-Seq assay for PPP1R16A is not available on ENCORE database.





112 RBPs can affect the gene expression of PPP1R16A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPP1R16AENSG00000160972.51293.84020723.270100.839008.835407.29720HepG2ABCF1
PPP1R16AENSG00000160972.5282.38070189.131900.578103.203002.52090HepG2CELF1
PPP1R16AENSG00000160972.5448.10580192.124801.221703.389502.54400HepG2DDX55
PPP1R16AENSG00000160972.5912.71620462.857100.979502.272701.70740HepG2DDX6
PPP1R16AENSG00000160972.51071.95170672.416400.6727011.3269010.14960HepG2DKC1
PPP1R16AENSG00000160972.5365.47920129.047401.5018022.7271021.02070HepG2DNAJC2
PPP1R16AENSG00000160972.5595.03760282.315801.075604.138103.03440HepG2EEF2
PPP1R16AENSG00000160972.5425.01440192.205001.1448010.912309.35300HepG2EIF4G2
PPP1R16AENSG00000160972.5799.76400637.516400.327002.659002.06730HepG2ETF1
PPP1R16AENSG00000160972.5344.79510204.888900.750804.248202.77080HepG2FAM120A
PPP1R16AENSG00000160972.5469.56910730.26700-0.637102.486501.75310HepG2FIP1L1
PPP1R16AENSG00000160972.5449.76790810.39800-0.8494010.713909.21530HepG2FUBP3
PPP1R16AENSG00000160972.51063.28960385.556101.4634022.7781021.13030HepG2GPKOW
PPP1R16AENSG00000160972.5274.23840110.042101.317307.480605.14850HepG2HNRNPA0
PPP1R16AENSG00000160972.5271.02590131.439501.043903.470802.75710HepG2HNRNPA1
PPP1R16AENSG00000160972.5200.00500107.429700.896502.841801.42110HepG2HNRNPAB
PPP1R16AENSG00000160972.5486.35460231.726801.0695014.0437012.59440HepG2HNRNPF
PPP1R16AENSG00000160972.5427.40410185.310301.2056016.5340015.01060HepG2HNRNPL
PPP1R16AENSG00000160972.5678.80610367.949100.883404.375903.59980HepG2HNRNPLL
PPP1R16AENSG00000160972.5229.04920145.237000.657103.829803.12710HepG2HNRNPU
PPP1R16AENSG00000160972.5534.12390228.180701.2269016.5128014.90700HepG2IGF2BP1
PPP1R16AENSG00000160972.5216.67340148.354500.546403.064402.29600HepG2ILF2
PPP1R16AENSG00000160972.5365.42000123.967601.559503.050301.78610HepG2KHDRBS1
PPP1R16AENSG00000160972.51132.11640577.573300.970802.883002.03560HepG2LARP4
PPP1R16AENSG00000160972.5816.14520510.606000.676501.912501.38060HepG2NCBP2
PPP1R16AENSG00000160972.5242.16210121.987500.989102.871901.42580HepG2NIP7
PPP1R16AENSG00000160972.5401.84930201.702400.994302.196601.51630HepG2NOL12
PPP1R16AENSG00000160972.5480.49690189.063801.345606.576104.36780HepG2NOLC1
PPP1R16AENSG00000160972.5483.79500176.635701.453507.501905.68780HepG2NONO
PPP1R16AENSG00000160972.5651.06430326.303400.9965010.621809.23240HepG2NSUN2
PPP1R16AENSG00000160972.5469.62860118.738401.9836014.8296012.73980HepG2PABPC1
PPP1R16AENSG00000160972.5437.19750129.539501.7548029.3237027.14110HepG2PPIL4
PPP1R16AENSG00000160972.5717.33140192.528401.8975037.4985035.61610HepG2PUF60
PPP1R16AENSG00000160972.5426.99640204.360801.0630013.8266012.71290HepG2PUM1
PPP1R16AENSG00000160972.5289.79420204.221900.504802.106701.51690HepG2PUM2
PPP1R16AENSG00000160972.5541.04230715.88920-0.404004.136703.41000HepG2PUS1
PPP1R16AENSG00000160972.5363.78970558.13640-0.617502.365501.78020HepG2QKI
PPP1R16AENSG00000160972.5666.60730821.62180-0.301602.127801.36260HepG2RBM15
PPP1R16AENSG00000160972.5369.52150162.717001.183208.699106.93400HepG2RBM27
PPP1R16AENSG00000160972.5348.41400132.134601.398704.123302.82350HepG2RCC2
PPP1R16AENSG00000160972.5776.03050573.621900.435903.436802.84730HepG2NELFE
PPP1R16AENSG00000160972.5381.42200150.045801.3459011.371309.84130HepG2RPS2
PPP1R16AENSG00000160972.5387.69220130.615601.5695012.4440010.80200HepG2RPS3A
PPP1R16AENSG00000160972.5296.56590153.188300.952905.335803.83190HepG2RPS5
PPP1R16AENSG00000160972.5381.74890129.339001.561406.621105.68820HepG2SAFB2
PPP1R16AENSG00000160972.5582.23780227.334101.356704.707702.84210HepG2SF1
PPP1R16AENSG00000160972.5607.75910364.160200.738803.351902.58250HepG2SF3B1
PPP1R16AENSG00000160972.5609.43080184.570701.7232039.6839037.69220HepG2SLBP
PPP1R16AENSG00000160972.5243.54020150.829500.691104.498703.71370HepG2SMN1
PPP1R16AENSG00000160972.5463.11240203.571601.185703.198801.76820HepG2SNRNP200
PPP1R16AENSG00000160972.5240.62210405.20520-0.751902.316501.60410HepG2SNRNP70
PPP1R16AENSG00000160972.5326.04800601.79790-0.884205.786305.13530HepG2SRFBP1
PPP1R16AENSG00000160972.5221.95760560.10150-1.335407.523506.83300HepG2SRSF1
PPP1R16AENSG00000160972.5401.82340190.073901.0799012.2891011.09700HepG2SRSF5
PPP1R16AENSG00000160972.5364.48820227.677900.678805.201904.29520HepG2SRSF7
PPP1R16AENSG00000160972.5311.15780455.71280-0.550502.468601.94050HepG2SRSF9
PPP1R16AENSG00000160972.5989.55330522.469200.9213019.5711018.47250HepG2SSB
PPP1R16AENSG00000160972.5311.87040113.709601.455507.992306.03090HepG2STIP1
PPP1R16AENSG00000160972.5447.30550216.183401.0489013.1524011.96260HepG2SUCLG1
PPP1R16AENSG00000160972.5728.39580492.876500.563404.837903.61160HepG2SUPT6H
PPP1R16AENSG00000160972.5377.60860191.190600.981802.358201.72750HepG2SUPV3L1
PPP1R16AENSG00000160972.5112.43280503.57140-2.1631013.1761012.08820HepG2TAF15
PPP1R16AENSG00000160972.5642.97430358.805000.841505.118904.17750HepG2TARDBP
PPP1R16AENSG00000160972.5488.43400141.118701.791209.824008.98420HepG2TIAL1
PPP1R16AENSG00000160972.5573.50880142.386802.0099047.0376045.09000HepG2TRIM56
PPP1R16AENSG00000160972.5406.48350624.54010-0.619603.391602.70150HepG2U2AF1
PPP1R16AENSG00000160972.5491.97640236.266201.058102.276601.39310HepG2U2AF2
PPP1R16AENSG00000160972.5220.77310112.896600.967502.716501.96360HepG2UCHL5
PPP1R16AENSG00000160972.5335.92190117.007101.521405.690504.12190HepG2XPO5
PPP1R16AENSG00000160972.5613.76910188.208201.705309.222507.92050HepG2XRN2
PPP1R16AENSG00000160972.5475.41840353.132600.428903.297602.57490HepG2ZC3H8
PPP1R16AENSG00000160972.5700.24460470.946600.572206.756005.92660K562AGGF1
PPP1R16AENSG00000160972.5715.62300490.049900.546203.014902.33200K562AKAP8L
PPP1R16AENSG00000160972.5723.75250916.70300-0.341001.811801.31690K562AQR
PPP1R16AENSG00000160972.5427.59490270.419800.660903.089801.68350K562BCCIP
PPP1R16AENSG00000160972.5447.31660261.380000.775003.236802.19800K562BCLAF1
PPP1R16AENSG00000160972.5140.12520226.72920-0.694303.128502.19970K562BOP1
PPP1R16AENSG00000160972.5272.25010463.89940-0.768902.859801.32600K562CEBPZ
PPP1R16AENSG00000160972.5234.37950155.293100.593802.814801.52280K562CIRBP
PPP1R16AENSG00000160972.5786.51620617.441300.349102.779901.67270K562CPEB4
PPP1R16AENSG00000160972.5388.77630198.295800.971203.915102.62780K562CSTF2
PPP1R16AENSG00000160972.5657.450801130.78740-0.782406.898805.37990K562CELF1
PPP1R16AENSG00000160972.5234.14300435.88510-0.896604.565002.27090K562DNAJC2
PPP1R16AENSG00000160972.5590.98290193.427001.6112011.964709.91890K562EFTUD2
PPP1R16AENSG00000160972.5842.64610506.907100.7331010.630709.36090K562EIF2S2
PPP1R16AENSG00000160972.5438.77600206.905001.084403.546302.36090K562EIF3D
PPP1R16AENSG00000160972.592.47650251.73570-1.444805.121603.50960K562FKBP4
PPP1R16AENSG00000160972.5151.40920245.28630-0.696003.493502.52870K562FMR1
PPP1R16AENSG00000160972.56.1417047.80930-2.960607.158305.90780K562G3BP2
PPP1R16AENSG00000160972.5442.47160639.75420-0.531904.219102.82310K562GLRX3
PPP1R16AENSG00000160972.5317.55910144.976201.131105.182003.59740K562IGF2BP2
PPP1R16AENSG00000160972.5213.98680147.426900.537402.480701.36770K562IGF2BP3
PPP1R16AENSG00000160972.5203.44910456.15560-1.164906.985704.71300K562ILF2
PPP1R16AENSG00000160972.5106.19740196.53350-0.888003.658702.56690K562KRR1
PPP1R16AENSG00000160972.5433.46460152.281501.5091020.3612017.90510K562MAGOH
PPP1R16AENSG00000160972.5291.93380151.960000.941802.133801.33360K562MATR3
PPP1R16AENSG00000160972.5397.35000672.63070-0.7594010.271108.81450K562MTPAP
PPP1R16AENSG00000160972.5212.94450368.44040-0.791006.076104.27430K562NCBP2
PPP1R16AENSG00000160972.5533.71550747.28220-0.485605.871004.84140K562NSUN2
PPP1R16AENSG00000160972.5378.25180135.477701.4812016.3866013.89980K562PCBP2
PPP1R16AENSG00000160972.5583.96390389.153500.585403.340002.42350K562PPIG
PPP1R16AENSG00000160972.5270.11680444.64980-0.719103.680301.57160K562PPIL4
PPP1R16AENSG00000160972.5372.60630188.231700.985002.668501.93190K562PRPF8
PPP1R16AENSG00000160972.5426.80660147.957201.5283021.7206019.93420K562PTBP1
PPP1R16AENSG00000160972.5577.248001067.23390-0.886607.104505.33690K562PUM1
PPP1R16AENSG00000160972.5392.67090141.828101.4691017.6958015.35730K562RBM22
PPP1R16AENSG00000160972.5385.67450236.967100.702602.838901.83440K562RCC2
PPP1R16AENSG00000160972.5237.18420149.261900.668103.441102.20230K562NELFE
PPP1R16AENSG00000160972.5434.10230191.592501.179902.126201.41470K562RPS19
PPP1R16AENSG00000160972.5246.94080445.79280-0.852204.846002.70520K562RPS3A
PPP1R16AENSG00000160972.5214.41450103.073501.056602.203601.31950K562RPS3
PPP1R16AENSG00000160972.5547.75750737.48240-0.429102.223701.48650K562SF3A3
PPP1R16AENSG00000160972.5121.6732049.705901.291406.393605.05570K562SF3B4
PPP1R16AENSG00000160972.5286.63240421.13690-0.555102.978901.66350K562SLBP
PPP1R16AENSG00000160972.5376.29260224.620000.744305.026703.52070K562SRFBP1
PPP1R16AENSG00000160972.5314.75280145.056701.117503.902403.06780K562SRSF1
PPP1R16AENSG00000160972.5187.6577099.494100.915304.090702.77510K562SRSF4
PPP1R16AENSG00000160972.5258.67440137.018100.916706.167904.49220K562SRSF5
PPP1R16AENSG00000160972.5295.17140449.77790-0.607704.051702.38550K562SSRP1
PPP1R16AENSG00000160972.516.3895046.92980-1.517702.882101.38020K562TAF15
PPP1R16AENSG00000160972.5539.47860146.786801.8777023.6463021.14560K562TARDBP
PPP1R16AENSG00000160972.5344.24840141.597701.2816013.2434011.33190K562TIA1
PPP1R16AENSG00000160972.5301.65290138.996901.117708.709706.46210K562TRA2A
PPP1R16AENSG00000160972.5746.345301131.19330-0.599905.279903.36830K562UBE2L3
PPP1R16AENSG00000160972.5604.48810792.36480-0.390503.864303.02720K562UPF1
PPP1R16AENSG00000160972.5433.21870677.99240-0.646203.297002.34470K562WDR3
PPP1R16AENSG00000160972.5450.93820705.09640-0.644905.230604.10110K562WDR43
PPP1R16AENSG00000160972.5846.539501086.08010-0.359502.941201.60640K562WRN
PPP1R16AENSG00000160972.5722.616101032.71810-0.515105.086103.85890K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPP1R16A is not available on ENCORE database.





6 RBPs can affect the splicing of PPP1R16A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPPP1R16AENSG00000160972.5chr8+1457233781457236001457227281457228361457241521457242230.081000.001910.04457includedK562RBM15
RIPPP1R16AENSG00000160972.5chr8+1457256491457259951457256491457257741457258691457259950.659000.000120.00114includedK562PUS1
RIPPP1R16AENSG00000160972.5chr8+1457256491457259951457256491457257741457258691457259950.255000.007710.06265includedK562AKAP8L
RIPPP1R16AENSG00000160972.5chr8+1457254781457257741457254781457255821457256491457257740.424000.004060.03706includedK562AKAP8L
RIPPP1R16AENSG00000160972.5chr8+1457256491457259951457256491457257741457258691457259950.541000.000030.00053includedK562RBM15
RIPPP1R16AENSG00000160972.5chr8+1457254781457257741457254781457255821457256491457257740.320000.006200.05334includedHepG2RBM22
RIPPP1R16AENSG00000160972.5chr8+1457256491457259951457256491457257741457258691457259950.335000.011680.09959includedK562UTP18
RIPPP1R16AENSG00000160972.5chr8+1457254781457257741457254781457255821457256491457257740.353000.008270.07680includedK562UTP18
RIPPP1R16AENSG00000160972.5chr8+1457254781457257741457254781457255821457256491457257740.487000.000030.00027includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PPP1R16A is not avaliable on ENCORE database.