PDLIM7

General Information

Gene Name       : PDLIM7
Gene ID             : ENSG00000196923.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PDLIM7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PDLIM7ENSG00000196923.130.713.492.10ENCSR000AEF
HepG2PDLIM7ENSG00000196923.1340.088.9924.54ENCSR985KAT
K562PDLIM7ENSG00000196923.1335.6617.1526.40ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDLIM7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PDLIM7 RNA is bound by 29 proteins.  







eCLIP assay for PDLIM7 is not avaliable on ENCORE database.





29 proteins are bound to PDLIM7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5176918377176918454-3'-UTR,CDS,intron-Distal,intron-Proximal4.009676.32636HepG2U2AF2
chr5176915144176915196-3'-UTR,CDS,intron-Distal3.9218110.53109K562DDX24
chr5176915105176915167-3'-UTR,CDS,intron-Distal4.073679.27186HepG2PPIG
chr5176916935176916983-3'-UTR,CDS,intron-Distal4.321407.16955K562UCHL5
chr5176917355176917395-3'-UTR,intron-Distal3.431145.29274K562PTBP1
chr5176917272176917316-3'-UTR,intron-Distal3.7604110.15140K562PTBP1
chr5176915027176915071-3'-UTR,CDS,intron-Distal,intron-Proximal4.007319.61107HepG2PRPF8
chr5176916562176916630-3'-UTR,CDS,intron-Distal,intron-Proximal4.184303.72506HepG2PABPN1
chr5176916575176916629-3'-UTR,CDS,intron-Distal,intron-Proximal3.231604.82082K562PUM1
chr5176918808176918872-3'-UTR,CDS,intron-Distal3.859956.41974HepG2PPIG
chr5176915181176915217-3'-UTR,CDS,intron-Distal3.238395.71803K562UCHL5
chr5176910590176910686-3'-UTR,CDS,intron-Distal,intron-Proximal3.656489.75296K562DDX55
chr5176915136176915229-3'-UTR,CDS,intron-Distal4.190343.99014HepG2PABPN1
chr5176910425176910495-3'-UTR,intron-Distal3.296355.43080K562HNRNPK
chr5176910507176910633-3'-UTR,intron-Distal,intron-Proximal3.9817915.14605K562PABPC4
chr5176910400176910505-3'-UTR,intron-Distal3.701425.60662HepG2PCBP2
chr5176916895176916959-3'-UTR,CDS,intron-Distal,intron-Proximal3.740114.10487K562HNRNPK
chr5176918127176918201-3'-UTR,CDS,intron-Distal,intron-Proximal5.8441031.82222K562SF3B4
chr5176916560176916601-3'-UTR,CDS,intron-Distal4.238397.16955K562UCHL5
chr5176915029176915050-3'-UTR,intron-Distal,intron-Proximal3.461416.16312K562AQR
chr5176918392176918445-3'-UTR,CDS,intron-Distal,intron-Proximal3.4572714.53295K562PRPF8
chr5176917362176917406-3'-UTR,intron-Distal4.152187.31085HepG2PCBP2
chr5176917275176917318-3'-UTR,intron-Distal3.845385.91072HepG2PCBP2
chr5176917362176917466-3'-UTR,intron-Distal5.0724319.19401K562PCBP1
chr5176916395176916423-3'-UTR,CDS,intron-Distal4.590124.97342HepG2PPIG
chr5176918781176918826-3'-UTR,CDS,intron-Distal,intron-Proximal4.0608624.66688K562AQR
chr5176914937176915070-3'-UTR,CDS,intron-Distal,intron-Proximal3.9748120.21288K562EFTUD2
chr5176917415176917456-3'-UTR,intron-Distal4.0295911.37496K562PTBP1
chr5176918416176918492-3'-UTR,CDS,intron-Distal,intron-Proximal3.3423510.02182K562PCBP1
chr5176910419176910525-3'-UTR,intron-Distal4.189338.09496HepG2HNRNPK
chr5176910510176910567-3'-UTR,intron-Distal4.215307.53622K562PCBP1
chr5176917879176917907-5'-UTR,CDS,intron-Distal3.207695.41277K562UCHL5
chr5176917867176917908-5'-UTR,CDS,intron-Distal,intron-Proximal3.673685.47500HepG2PPIG
chr5176918009176918037-5'-UTR,CDS,intron-Distal,intron-Proximal4.127125.52342HepG2PPIG
chr5176917873176917907-5'-UTR,CDS,intron-Distal3.253825.47253K562DDX24
chr5176923528176923584-5'-UTR,intron-Distal,intron-Proximal4.4231117.47573K562SF3B4
chr5176923679176923723-5'-UTR,intron-Distal3.060224.99905K562RBFOX2
chr5176923693176923765-5'-UTR,intron-Distal3.702325.09665HepG2HNRNPK
chr5176923841176923913-5'-UTR,intron-Distal,intron-Proximal3.434554.09699HepG2HNRNPK
chr5176923685176923719-5'-UTR,intron-Distal3.854655.29694K562EFTUD2
chr5176917834176917912-5'-UTR,CDS,intron-Distal,intron-Proximal3.9434911.95020HepG2PRPF8
chr5176919360176919431-CDS,intron-Distal,intron-Proximal4.438955.90528HepG2AQR
chr5176918984176919027-CDS,intron-Distal,intron-Proximal4.055274.75655HepG2PRPF8
chr5176923422176923458-CDS,intron-Distal,intron-Proximal5.1077310.42419K562DDX24
chr5176919421176919440-CDS,intron-Distal,intron-Proximal3.360848.28940K562BUD13
chr5176917545176917628-CDS,intron-Distal4.5144710.08663K562U2AF2
chr5176919358176919407-CDS,intron-Distal,intron-Proximal3.4795621.34815K562PRPF8
chr5176917584176917644-CDS,intron-Distal5.1693540.32468K562PTBP1
chr5176917093176917184-CDS,intron-Distal,intron-Proximal4.1936717.21811K562DDX24
chr5176917566176917685-CDS,intron-Distal6.0569428.95933HepG2PCBP2
chr5176923454176923491-CDS,intron-Distal,intron-Proximal3.046407.97922K562BUD13
chr5176917084176917144-CDS,intron-Distal,intron-Proximal5.000106.36553HepG2RBFOX2
chr5176919604176919679-CDS,intron-Distal,intron-Proximal4.0955310.98900HepG2PPIG
chr5176919592176919675-CDS,intron-Distal4.009304.21087HepG2GRWD1
chr5176917078176917212-CDS,intron-Distal,intron-Proximal3.1224715.13063K562RBFOX2
chr5176919392176919407-CDS,intron-Distal,intron-Proximal3.7844314.90602HepG2PRPF8
chr5176917094176917193-CDS,intron-Distal,intron-Proximal3.3371224.58289K562PRPF8
chr5176917096176917164-CDS,intron-Distal,intron-Proximal3.513615.78389K562GTF2F1
chr5176919607176919669-CDS,intron-Distal3.8941717.06478K562DDX24
chr5176919355176919428-CDS,intron-Distal,intron-Proximal3.361956.42293K562PUM1
chr5176919314176919414-CDS,intron-Distal,intron-Proximal4.0149818.03060K562DDX24
chr5176917092176917161-CDS,intron-Distal,intron-Proximal3.320945.90321K562PHF6
chr5176919535176919574-CDS,intron-Distal,intron-Proximal4.122017.97611K562DDX24
chr5176918884176918952-CDS,intron-Distal,intron-Proximal4.5408937.80707K562AQR
chr5176919527176919594-CDS,intron-Distal,intron-Proximal4.5999013.06175HepG2PPIG
chr5176917589176917704-CDS,intron-Distal5.4766021.85796HepG2PTBP1
chr5176917583176917726-CDS,intron-Distal3.5042511.52182K562MATR3
chr5176917570176917694-CDS,intron-Distal4.059369.27521HepG2U2AF2
chr5176918917176918947-CDS,intron-Distal,intron-Proximal3.644647.07647K562PRPF8
chr5176918990176919025-CDS,intron-Distal,intron-Proximal3.230227.19221K562BUD13
chr5176918185176918303-intron-Distal,intron-Proximal3.787256.94360HepG2DDX59
chr5176919360176919392-intron-Distal,intron-Proximal4.3480021.15190HepG2PRPF8
chr5176923381176923409-intron-Distal,intron-Proximal5.025964.35676HepG2PRPF8
chr5176916654176916675-intron-Distal,intron-Proximal4.355647.08280K562SF3B4
chr5176919328176919379-intron-Distal,intron-Proximal3.652529.64430K562SF3B4
chr5176919309176919353-intron-Distal,intron-Proximal5.2248653.53031K562AQR
chr5176924487176924528-intron-Distal5.8423311.25363K562AQR
chr5176917111176917155-intron-Distal,intron-Proximal3.6824913.21934K562BUD13
chr5176919120176919207-intron-Distal3.2981321.58704K562PRPF8
chr5176918160176918261-intron-Distal,intron-Proximal6.6288828.88705K562HNRNPK
chr5176918261176918323-intron-Distal,intron-Proximal4.1855715.03381K562HNRNPK
chr5176919216176919254-intron-Distal3.417834.01163K562RBM15
chr5176919288176919370-intron-Distal,intron-Proximal4.0828812.07546K562RBFOX2
chr5176917145176917211-intron-Distal,intron-Proximal3.862446.25647K562HNRNPM
chr5176917644176917726-intron-Distal5.1619429.94958K562PTBP1
chr5176917844176917866-intron-Distal,intron-Proximal3.905175.64238K562PRPF8
chr5176918764176918781-intron-Distal,intron-Proximal4.7050219.82382K562AQR
chr5176919322176919358-intron-Distal,intron-Proximal3.8648722.52859K562PRPF8
chr5176917652176917719-intron-Distal4.3970223.98280K562PCBP1
chr5176911378176911434-intron-Distal3.752443.00997K562TAF15
chr5176919316176919375-intron-Distal,intron-Proximal3.799838.57308HepG2BUD13
chr5176919353176919362-intron-Distal,intron-Proximal4.5167344.53058K562AQR
chr5176918609176918738-intron-Distal,intron-Proximal5.799597.79368HepG2XPO5
chr5176911636176911710-intron-Distal3.166243.13706K562TAF15
chr5176917775176917825-intron-Distal,intron-Proximal4.251889.71578K562PTBP1
chr5176924250176924326-intron-Distal4.591503.71567HepG2RBFOX2
chr5176914529176914608-intron-Distal4.017734.04666K562NOLC1
chr5176911385176911440-intron-Distal3.991415.51270K562GTF2F1
chr5176923954176924024-intron-Distal,intron-Proximal4.065767.30362HepG2HNRNPK
chr5176917153176917217-intron-Distal,intron-Proximal3.004564.59729HepG2RBFOX2
chr5176919207176919263-intron-Distal4.582906.35761K562HNRNPM
chr5176919097176919229-intron-Distal4.1417610.74455HepG2RBFOX2
chr5176918222176918362-intron-Distal,intron-Proximal3.305767.71376HepG2HNRNPK
chr5176911440176911521-intron-Distal,intron-Proximal3.031605.43751K562GTF2F1
chr5176919308176919384-intron-Distal,intron-Proximal4.1856810.83535HepG2EFTUD2
chr5176917155176917205-intron-Distal,intron-Proximal3.423749.66659K562BUD13
chr5176919402176919406-intron-Distal,intron-Proximal5.4574162.30006K562AQR
chr5176919325176919368-intron-Distal,intron-Proximal3.258635.41277K562UCHL5
chr5176923376176923414-intron-Distal,intron-Proximal4.041176.80869K562AQR
chr5176917594176917652-intron-Distal4.6745022.04984K562PCBP1
chr5176917140176917203-intron-Distal,intron-Proximal4.4473514.06112K562PTBP1
chr5176918164176918222-intron-Distal,intron-Proximal4.257934.07750HepG2HNRNPK
chr5176919294176919321-intron-Distal,intron-Proximal4.288997.08947HepG2PRPF8
chr5176911195176911277-intron-Distal,intron-Proximal3.5064311.12198K562SF3B4
chr5176912936176912995-intron-Distal3.321833.37821K562ILF3
chr5176919327176919406-intron-Distal,intron-Proximal3.9014123.44249K562BUD13
chr5176918147176918171-intron-Distal,intron-Proximal4.447759.66374K562BUD13
chr5176919321176919360-intron-Distal,intron-Proximal4.3295114.67766HepG2PRPF8
chr5176919288176919309-intron-Distal,intron-Proximal4.4866110.05968K562BUD13
chr5176917831176917852-intron-Distal,intron-Proximal5.167366.44303K562AQR
chr5176917926176917977-intron-Distal,intron-Proximal4.3935314.26770K562SF3B4
chr5176918235176918325-intron-Distal,intron-Proximal4.595527.75946HepG2PCBP2
chr5176918313176918380-intron-Distal,intron-Proximal4.4267620.89832K562PCBP1
chr5176924210176924308-intron-Distal3.526678.76201K562RBFOX2
chr5176917852176917869-intron-Distal,intron-Proximal3.662635.34337K562AQR
chr5176919309176919327-intron-Distal,intron-Proximal4.8005714.09713K562BUD13
chr5176919362176919402-intron-Distal,intron-Proximal5.56241400.00000K562AQR
chr5176919691176919722-intron-Distal,intron-Proximal4.536409.71879K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDLIM7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDLIM7 is not available on ENCORE database.

  • 146 RBPs can affect the levels of PDLIM7.  








The Knockdown/knockout RNA-Seq assay for PDLIM7 is not available on ENCORE database.





146 RBPs can affect the gene expression of PDLIM7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDLIM7ENSG00000196923.91353.24370525.337701.3650050.1090048.32450HepG2ACO1
PDLIM7ENSG00000196923.9692.46320214.732301.6891015.4552014.30370HepG2AKAP1
PDLIM7ENSG00000196923.91198.35460463.164901.3714021.3876018.82110HepG2AKAP8
PDLIM7ENSG00000196923.9857.35140527.776600.6999010.949709.55310HepG2AKAP8L
PDLIM7ENSG00000196923.9385.33110177.648501.117009.162007.78910HepG2ASCC1
PDLIM7ENSG00000196923.91498.52620673.861001.1529023.2596021.62590HepG2AUH
PDLIM7ENSG00000196923.9634.43280332.646600.931402.279001.43290HepG2BCCIP
PDLIM7ENSG00000196923.9728.67050524.045900.475503.442302.07760HepG2BUD13
PDLIM7ENSG00000196923.9467.12510243.235700.941405.618204.52450HepG2CNOT7
PDLIM7ENSG00000196923.9511.70230736.85270-0.526104.088103.26690HepG2CPSF6
PDLIM7ENSG00000196923.9949.57400575.990200.721108.149906.34610HepG2CPSF7
PDLIM7ENSG00000196923.9335.48840230.285700.542703.561702.40390HepG2YBX3
PDLIM7ENSG00000196923.91321.27890347.803601.9255031.2757029.60000HepG2CELF1
PDLIM7ENSG00000196923.9126.57540223.25820-0.818702.313601.48570HepG2DDX24
PDLIM7ENSG00000196923.9558.11940205.644901.440309.557808.45660HepG2DDX3X
PDLIM7ENSG00000196923.9487.75350253.932100.941603.619402.07390HepG2DDX52
PDLIM7ENSG00000196923.91655.92150327.093202.3398016.0351014.38400HepG2DDX55
PDLIM7ENSG00000196923.9400.81830557.68490-0.476503.019701.96840HepG2DDX5
PDLIM7ENSG00000196923.91127.04750176.776602.6724014.9136013.63220HepG2DDX6
PDLIM7ENSG00000196923.9338.00350502.59670-0.572404.117903.32380HepG2DKC1
PDLIM7ENSG00000196923.9403.93310226.124100.836905.164104.23160HepG2DNAJC21
PDLIM7ENSG00000196923.9430.37630224.126300.941205.630904.74720HepG2DNAJC2
PDLIM7ENSG00000196923.9354.49160169.817201.061706.044005.18570HepG2EIF2S1
PDLIM7ENSG00000196923.91069.14930530.605201.0107016.7156014.20290HepG2EIF2S2
PDLIM7ENSG00000196923.9508.96510245.756801.050202.903101.98030HepG2EIF3D
PDLIM7ENSG00000196923.9475.22520182.776401.378404.586003.71320HepG2EIF4B
PDLIM7ENSG00000196923.9446.62170605.95670-0.440203.086301.93600HepG2ESF1
PDLIM7ENSG00000196923.91530.12930773.753800.9836026.5053024.96970HepG2ETF1
PDLIM7ENSG00000196923.9643.41520513.317600.325802.023301.31130HepG2EWSR1
PDLIM7ENSG00000196923.9451.91040219.800501.039706.193104.40950HepG2FAM120A
PDLIM7ENSG00000196923.92780.49620706.445301.9766019.0249017.33160HepG2FIP1L1
PDLIM7ENSG00000196923.9738.29010189.468501.9621032.9711030.91980HepG2FXR1
PDLIM7ENSG00000196923.9544.74860175.665601.6327020.7608019.02030HepG2G3BP1
PDLIM7ENSG00000196923.9453.25060258.277600.811305.484004.04330HepG2GNB2L1
PDLIM7ENSG00000196923.9727.41540501.525800.536406.516805.09710HepG2HDGF
PDLIM7ENSG00000196923.9346.03360205.949600.748504.073102.39020HepG2HNRNPA0
PDLIM7ENSG00000196923.9473.57780343.707000.462303.335602.32120HepG2HNRNPA2B1
PDLIM7ENSG00000196923.9384.34730201.084500.934506.575204.31530HepG2HNRNPAB
PDLIM7ENSG00000196923.9559.01810780.59590-0.481705.602704.62500HepG2HNRNPF
PDLIM7ENSG00000196923.9518.37490178.097401.5412019.1134017.42840HepG2HNRNPK
PDLIM7ENSG00000196923.9464.75440340.700600.447903.421302.67970HepG2HNRNPL
PDLIM7ENSG00000196923.9460.11990797.09700-0.792707.884906.88330HepG2HNRNPLL
PDLIM7ENSG00000196923.9843.20760487.305900.791009.557107.97030HepG2HNRNPM
PDLIM7ENSG00000196923.9464.20690252.251700.8798010.874909.74040HepG2HNRNPU
PDLIM7ENSG00000196923.9481.24380768.66170-0.675607.788706.62940HepG2IGF2BP1
PDLIM7ENSG00000196923.9436.92840178.526701.2912012.6111011.28960HepG2IGF2BP2
PDLIM7ENSG00000196923.9630.78840167.674701.911405.472604.11590HepG2IGF2BP3
PDLIM7ENSG00000196923.9419.65610257.666800.703607.425106.28530HepG2ILF2
PDLIM7ENSG00000196923.9422.75810232.040000.865406.046904.18370HepG2KHDRBS1
PDLIM7ENSG00000196923.9339.65510179.630100.918902.542901.58960HepG2KHSRP
PDLIM7ENSG00000196923.91410.92250876.655000.686503.481102.54990HepG2LARP4
PDLIM7ENSG00000196923.9457.71830253.121400.854506.789005.05120HepG2LARP7
PDLIM7ENSG00000196923.9290.01030189.535500.613501.913901.36300HepG2MAGOH
PDLIM7ENSG00000196923.9683.78350190.567101.8431025.7114023.96160HepG2MATR3
PDLIM7ENSG00000196923.9529.36260257.151301.041505.194203.78150HepG2METAP2
PDLIM7ENSG00000196923.9883.46900571.574400.628103.838902.89070HepG2MSI2
PDLIM7ENSG00000196923.9383.61900813.00120-1.083607.454805.83150HepG2MTPAP
PDLIM7ENSG00000196923.9893.97360195.032402.1964041.6312039.38550HepG2NCBP2
PDLIM7ENSG00000196923.9715.86650370.862000.948702.713301.95770HepG2NOL12
PDLIM7ENSG00000196923.9281.55140110.180101.353407.768705.34980HepG2NOLC1
PDLIM7ENSG00000196923.9754.05890300.520201.327109.165607.13960HepG2NONO
PDLIM7ENSG00000196923.9395.99560706.80080-0.835808.115106.88210HepG2NSUN2
PDLIM7ENSG00000196923.9857.79020222.402201.9474013.2693011.28050HepG2PABPC1
PDLIM7ENSG00000196923.9423.95340173.580201.2882012.5230011.01660HepG2PABPC4
PDLIM7ENSG00000196923.9461.02460249.686400.884607.330506.05940HepG2PARN
PDLIM7ENSG00000196923.9349.42140155.456801.1684012.9720011.81180HepG2PCBP1
PDLIM7ENSG00000196923.9216.31150419.38040-0.9551011.156209.75210HepG2PRPF4
PDLIM7ENSG00000196923.9958.18340158.187102.5986093.5010091.44160HepG2PTBP1
PDLIM7ENSG00000196923.9524.58390354.011400.567304.146903.43370HepG2PUF60
PDLIM7ENSG00000196923.91009.97930375.788301.4262047.1816045.34350HepG2PUM1
PDLIM7ENSG00000196923.91002.42370375.520301.416403.772802.99450HepG2PUM2
PDLIM7ENSG00000196923.9348.80190171.312101.025709.017907.98780HepG2QKI
PDLIM7ENSG00000196923.9454.10770194.654501.222002.086101.46630HepG2RAVER1
PDLIM7ENSG00000196923.91227.15500826.561200.570005.949104.75160HepG2RBM15
PDLIM7ENSG00000196923.9886.64090646.700100.455204.623803.99850HepG2RBM22
PDLIM7ENSG00000196923.9478.18050155.479901.6207010.114908.88540HepG2RBM25
PDLIM7ENSG00000196923.9573.93360305.238300.910806.475104.95000HepG2RBM27
PDLIM7ENSG00000196923.9830.28540176.043802.2376058.8654057.14250HepG2NELFE
PDLIM7ENSG00000196923.9387.96850163.966901.242405.189804.38050HepG2RECQL
PDLIM7ENSG00000196923.9639.05290840.92840-0.396002.778302.09400HepG2RPLP0
PDLIM7ENSG00000196923.9788.24230239.209701.7203017.6577016.30480HepG2RPS19
PDLIM7ENSG00000196923.9554.00160281.484500.976706.740905.52750HepG2RPS2
PDLIM7ENSG00000196923.9592.67840287.362701.0443010.073808.04620HepG2RPS5
PDLIM7ENSG00000196923.9344.71260224.641500.617703.287702.59580HepG2SAFB2
PDLIM7ENSG00000196923.9736.33250496.297900.569103.670402.89060HepG2SF3A3
PDLIM7ENSG00000196923.9403.97250788.95120-0.9657011.7480010.38810HepG2SF3B1
PDLIM7ENSG00000196923.9614.82330164.686101.9004015.5665014.33940HepG2SF3B4
PDLIM7ENSG00000196923.91078.82880234.024302.2046010.705807.55070HepG2SFPQ
PDLIM7ENSG00000196923.9911.45910261.970301.7987061.0395058.78880HepG2SMN1
PDLIM7ENSG00000196923.9462.23720199.512701.212103.551402.45120HepG2SMNDC1
PDLIM7ENSG00000196923.9533.87180215.573101.308204.747902.92000HepG2SNRNP200
PDLIM7ENSG00000196923.91018.93120730.397700.480206.362705.68740HepG2SRFBP1
PDLIM7ENSG00000196923.9429.60620171.899501.3213016.9563015.99640HepG2SRSF1
PDLIM7ENSG00000196923.9628.49610848.96370-0.433802.437401.50340HepG2SRSF3
PDLIM7ENSG00000196923.9905.65910349.522201.3735034.9855033.11290HepG2SRSF5
PDLIM7ENSG00000196923.9285.16330139.851901.027809.566208.64740HepG2SRSF9
PDLIM7ENSG00000196923.9384.57340634.11230-0.721509.282308.45000HepG2SSB
PDLIM7ENSG00000196923.9416.13120212.781800.967607.402205.53530HepG2STIP1
PDLIM7ENSG00000196923.91131.35880397.513701.5089051.5115049.43880HepG2SUCLG1
PDLIM7ENSG00000196923.9796.74380325.565601.2911013.3917012.08920HepG2SUPV3L1
PDLIM7ENSG00000196923.9538.27600218.184401.3027010.704708.99770HepG2TFIP11
PDLIM7ENSG00000196923.9223.29730141.972500.653303.396102.47420HepG2TIA1
PDLIM7ENSG00000196923.9403.30230245.110900.718303.904003.33140HepG2TIAL1
PDLIM7ENSG00000196923.9632.93020247.300701.3557028.0334026.47650HepG2TRIM56
PDLIM7ENSG00000196923.9543.21090345.837200.651302.389801.58180HepG2TUFM
PDLIM7ENSG00000196923.91203.30140250.292002.2652012.2321010.05830HepG2U2AF2
PDLIM7ENSG00000196923.91005.81900366.052101.458106.810205.46870HepG2UBE2L3
PDLIM7ENSG00000196923.9312.93560192.287100.702503.669502.79700HepG2UCHL5
PDLIM7ENSG00000196923.9703.19690440.139800.675906.659505.65140HepG2UPF1
PDLIM7ENSG00000196923.9660.05830424.938600.635206.407205.55870HepG2UTP3
PDLIM7ENSG00000196923.9487.26540214.256901.185302.502001.49680HepG2XRCC6
PDLIM7ENSG00000196923.91094.75680484.070401.1772037.0106035.60500HepG2ZNF622
PDLIM7ENSG00000196923.91508.59560850.473700.826803.816301.78470K562ADAR
PDLIM7ENSG00000196923.92325.132401406.841300.724809.660408.68210K562AGGF1
PDLIM7ENSG00000196923.92286.725601546.060400.564607.744405.87260K562AKAP8
PDLIM7ENSG00000196923.92297.809201463.920100.650303.778803.01320K562AKAP8L
PDLIM7ENSG00000196923.9975.721201421.11470-0.542505.378404.60690K562AQR
PDLIM7ENSG00000196923.91002.01900582.950900.781409.448207.65620K562BCLAF1
PDLIM7ENSG00000196923.91224.08830832.897000.555402.839401.76820K562CCAR1
PDLIM7ENSG00000196923.92180.177901673.359100.381603.314102.09500K562CPEB4
PDLIM7ENSG00000196923.91083.87040823.616400.396003.483502.60150K562CPSF6
PDLIM7ENSG00000196923.9922.47110442.255301.0605011.541809.20630K562CSTF2
PDLIM7ENSG00000196923.92072.542701366.676600.600608.763706.60410K562DDX21
PDLIM7ENSG00000196923.91118.21100815.471900.455404.589503.19810K562DDX3X
PDLIM7ENSG00000196923.9835.64280498.191100.746103.559602.51580K562EFTUD2
PDLIM7ENSG00000196923.91405.82030973.708500.529807.837306.71810K562EIF2S2
PDLIM7ENSG00000196923.9969.51190767.252700.337503.114801.87020K562EIF4B
PDLIM7ENSG00000196923.91483.733601000.154900.568907.538005.40550K562EXOSC5
PDLIM7ENSG00000196923.9722.75020886.01640-0.293802.340201.77570K562FXR1
PDLIM7ENSG00000196923.939.24880214.21300-2.4483012.7205010.96950K562G3BP2
PDLIM7ENSG00000196923.91354.47590786.303400.7845011.405909.76920K562GPKOW
PDLIM7ENSG00000196923.9935.15610415.198201.171303.550102.33220K562IGF2BP2
PDLIM7ENSG00000196923.9652.23400422.122800.627602.387301.30330K562IGF2BP3
PDLIM7ENSG00000196923.91933.315801487.143800.378402.593101.56380K562MAK16
PDLIM7ENSG00000196923.92525.491601740.277200.537107.738006.06370K562MBNL1
PDLIM7ENSG00000196923.91078.58130767.539900.490704.722003.55880K562METAP2
PDLIM7ENSG00000196923.9847.06910491.652500.784703.598702.08010K562NONO
PDLIM7ENSG00000196923.92659.063501764.481700.5916014.1101012.60790K562NSUN2
PDLIM7ENSG00000196923.91208.43680764.169000.661103.391001.74980K562NUSAP1
PDLIM7ENSG00000196923.9613.55880387.745800.662002.628701.67590K562PCBP2
PDLIM7ENSG00000196923.9737.66030975.78190-0.403602.703401.91260K562POLR2G
PDLIM7ENSG00000196923.91305.852301016.807000.360802.839102.00700K562PPIG
PDLIM7ENSG00000196923.91144.41130695.470200.718404.947303.69060K562PSIP1
PDLIM7ENSG00000196923.9682.77670423.526700.688904.592803.75800K562PTBP1
PDLIM7ENSG00000196923.91488.399901980.39110-0.412003.700002.45160K562PUM1
PDLIM7ENSG00000196923.92234.113301451.535500.622004.910104.21300K562PUS1
PDLIM7ENSG00000196923.91506.19110888.735200.761005.505102.61060K562RBFOX2
PDLIM7ENSG00000196923.9603.24800405.854800.571702.182301.44030K562RBM22
PDLIM7ENSG00000196923.9626.37430395.827500.662104.217102.37680K562RBM34
PDLIM7ENSG00000196923.91943.302601271.377000.612003.623901.81880K562SBDS
PDLIM7ENSG00000196923.9677.08910898.96310-0.408902.973101.47050K562SDAD1
PDLIM7ENSG00000196923.92343.926501741.006100.428906.998205.74600K562SF3A3
PDLIM7ENSG00000196923.9470.98290222.504201.0817013.5459011.55560K562SF3B4
PDLIM7ENSG00000196923.92197.626101231.096200.835904.344302.56240K562SFPQ
PDLIM7ENSG00000196923.9158.39400274.06420-0.791005.170002.81330K562SND1
PDLIM7ENSG00000196923.9904.32120601.924800.587202.787601.75890K562SRFBP1
PDLIM7ENSG00000196923.9717.10970415.250100.788103.967103.12660K562SRSF1
PDLIM7ENSG00000196923.9899.02790531.795200.757408.891106.86740K562SRSF4
PDLIM7ENSG00000196923.9798.82940392.303001.0258012.130209.77540K562SRSF5
PDLIM7ENSG00000196923.91663.626001219.381500.448103.426502.11450K562SRSF7
PDLIM7ENSG00000196923.9893.102001175.13260-0.395903.015201.58740K562SSRP1
PDLIM7ENSG00000196923.9685.47760978.77770-0.513904.472003.42160K562SYNCRIP
PDLIM7ENSG00000196923.985.50490210.25530-1.298103.427401.72160K562TAF15
PDLIM7ENSG00000196923.91097.58780420.146601.3853010.472908.95230K562TARDBP
PDLIM7ENSG00000196923.9913.77880405.308701.1727017.6039015.38760K562TIA1
PDLIM7ENSG00000196923.9752.17660397.997400.918207.441105.43640K562TRA2A
PDLIM7ENSG00000196923.92268.412901870.912800.277803.961803.11530K562UPF1
PDLIM7ENSG00000196923.91421.137601664.68630-0.228202.727801.88660K562WDR43
PDLIM7ENSG00000196923.9969.71390505.970000.938403.941602.39740K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDLIM7 is not available on ENCORE database.





16 RBPs can affect the splicing of PDLIM7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPDLIM7ENSG00000196923.9chr5-176916771176916833176916393176916628176917870176917907-0.336000.000000.00001excludedHepG2RBM22
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.222000.000000.00000longerK562AGGF1
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.477000.000310.06490longerHepG2PTBP1
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.320000.000060.01033longerK562EFTUD2
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.201000.000000.00000longerK562AKAP8L
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.126000.000000.02263longerK562LIN28B
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.415000.000000.00000longerHepG2U2AF2
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.284000.000000.00003longerHepG2TIAL1
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.157000.000000.00002longerK562PUS1
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.240000.000000.00002longerK562UTP18
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.174000.000000.00015longerK562SF3B1
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.737000.000000.00006longerK562PTBP1
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.211000.000260.08294longerHepG2FUBP3
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.292000.000000.00000longerHepG2U2AF1
A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.183000.000000.00000longerK562RBM15
MXEPDLIM7ENSG00000196923.9chr5-176918404176918421176918807176918977176918010176918147176919405176919436-0.638000.001320.042622includedK562PTBP1
MXEPDLIM7ENSG00000196923.9chr5-176916771176916833176917870176917907176916393176916628176918010176918147-0.163000.003720.071342includedK562SBDS
MXEPDLIM7ENSG00000196923.9chr5-176916771176916833176917870176917907176916393176916628176918010176918147-0.208000.000210.005842includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PDLIM7 is not avaliable on ENCORE database.