RP11-51F16.8

General Information

Gene Name : RP11-51F16.8
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-51F16.8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-51F16.8 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-51F16.8 RNA is bound by 23 proteins.

eCLIP assay for RP11-51F16.8 is not avaliable on ENCORE database.

23 proteins are bound to RP11-51F16.8 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	61790722	61790788	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.70403	4.68690	HepG2	PRPF8
chr17	61781577	61781718	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.81522	6.26248	HepG2	PRPF8
chr17	61788150	61788249	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.85463	8.55183	K562	SF3B4
chr17	61781320	61781368	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.84602	4.86944	K562	AQR
chr17	61790766	61790883	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.32280	4.25541	HepG2	GRWD1
chr17	61788165	61788206	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.51315	3.91876	HepG2	U2AF2
chr17	61829294	61829346	-	CDS,intron-Distal,intron-Proximal	3.57390	7.85158	K562	UCHL5
chr17	61829298	61829340	-	CDS,intron-Distal,intron-Proximal	4.00418	5.97027	HepG2	GRWD1
chr17	61829298	61829334	-	CDS,intron-Distal,intron-Proximal	5.92259	12.88829	HepG2	BCLAF1
chr17	61829299	61829355	-	CDS,intron-Distal,intron-Proximal	3.38838	4.48452	HepG2	FXR2
chr17	61829297	61829360	-	CDS,intron-Distal,intron-Proximal	3.09459	9.72347	K562	ZNF622
chr17	61823287	61823321	-	3'-UTR,intron-Distal	5.02714	14.70754	HepG2	LIN28B
chr17	61822962	61823061	-	3'-UTR,intron-Distal	3.71903	17.11974	HepG2	DDX55
chr17	61824277	61824324	-	CDS,intron-Distal	3.31184	6.73967	K562	ZNF622
chr17	61822965	61823048	-	3'-UTR,intron-Distal	4.02549	17.76642	HepG2	LARP4
chr17	61781413	61781470	-	3'-UTR,intron-Distal,intron-Proximal	4.42075	5.07796	HepG2	SF3B4
chr17	61823321	61823347	-	3'-UTR,intron-Distal	6.13816	61.80292	HepG2	LIN28B
chr17	61824273	61824324	-	CDS,intron-Distal	4.17483	4.83483	HepG2	FXR2
chr17	61823289	61823341	-	3'-UTR,intron-Distal	8.46205	115.04786	K562	LIN28B
chr17	61822956	61823056	-	3'-UTR,intron-Distal	3.48757	26.14183	K562	GTF2F1
chr17	61822945	61823042	-	3'-UTR,intron-Distal	3.55723	34.42039	K562	FAM120A
chr17	61824252	61824324	-	CDS,intron-Distal	3.47466	11.20074	K562	UCHL5
chr17	61824277	61824370	-	CDS,intron-Distal	3.91196	7.61055	K562	U2AF2
chr17	61824272	61824324	-	CDS,intron-Distal	4.06102	13.38279	HepG2	BCLAF1
chr17	61781642	61781701	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.94234	4.89208	K562	AQR
chr17	61822980	61823055	-	3'-UTR,intron-Distal	3.18048	28.87296	K562	PABPC4
chr17	61824108	61824169	-	3'-UTR,intron-Distal	3.88136	10.05563	HepG2	BCLAF1
chr17	61822937	61823039	-	3'-UTR,intron-Distal	3.84336	20.11868	K562	TIA1
chr17	61823029	61823060	-	3'-UTR,intron-Distal	3.78139	9.32772	HepG2	PRPF4
chr17	61824170	61824266	-	3'-UTR,CDS,intron-Distal	3.40280	7.60260	K562	ZNF622
chr17	61824168	61824247	-	3'-UTR,CDS,intron-Distal	3.50619	8.31377	HepG2	GRWD1
chr17	61822978	61823051	-	3'-UTR,intron-Distal	3.01541	8.38227	K562	DDX55
chr17	61822981	61823039	-	3'-UTR,intron-Distal	3.57804	4.43069	HepG2	TIA1
chr17	61822961	61823029	-	3'-UTR,intron-Distal	4.83127	19.48885	HepG2	PRPF4
chr17	61823386	61823536	-	3'-UTR,intron-Distal	3.03129	8.79992	K562	KHSRP
chr17	61822963	61823037	-	3'-UTR,intron-Distal	3.44940	9.02812	HepG2	DDX6
chr17	61823347	61823367	-	3'-UTR,intron-Distal	5.95213	49.82584	HepG2	LIN28B
chr17	61824262	61824323	-	CDS,intron-Distal	3.77231	10.29040	K562	ZNF800
chr17	61824227	61824272	-	3'-UTR,CDS,intron-Distal	5.21707	15.62471	HepG2	BCLAF1
chr17	61824186	61824240	-	3'-UTR,intron-Distal	3.92810	9.17402	K562	UCHL5
chr17	61822944	61823048	-	3'-UTR,intron-Distal	3.33117	4.58235	HepG2	FAM120A
chr17	61822120	61822241	-	intron-Distal	3.34136	3.94088	HepG2	QKI
chr17	61822957	61823060	-	3'-UTR,intron-Distal	4.88769	10.58113	HepG2	TIAL1
chr17	61822977	61823036	-	3'-UTR,intron-Distal	3.86044	7.40396	K562	APOBEC3C
chr17	61823341	61823388	-	3'-UTR,intron-Distal	7.42079	112.30929	K562	LIN28B
chr17	61822971	61823053	-	3'-UTR,intron-Distal	3.12849	11.32916	HepG2	GTF2F1
chr17	61824169	61824227	-	3'-UTR,intron-Distal	4.42758	15.91092	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-51F16.8 is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-51F16.8 is not available on ENCORE database.
No RBPs affect the gene expression of RP11-51F16.8 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-51F16.8 is not available on ENCORE database.

No RBPs affect the gene expression of RP11-51F16.8 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-51F16.8 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-51F16.8 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	RP11-51F16.8	ENSG00000125695.12	chr17	-	61784606	61784778	61787850	61787974	61783994	61784099	61788087	61788196	0.25900	0.00196	0.03300	1included	K562	U2AF1
MXE	RP11-51F16.8	ENSG00000125695.12	chr17	-	61784606	61784778	61787850	61787974	61783994	61784099	61788087	61788196	0.25200	0.00146	0.02128	1included	K562	U2AF2
MXE	RP11-51F16.8	ENSG00000125695.12	chr17	-	61784606	61784778	61787850	61787974	61783994	61784099	61788087	61788196	0.29800	0.00004	0.00146	1included	K562	HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-51F16.8

General Information

Functions

Localization

Domains (AlphaFold: RP11-51F16.8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-51F16.8 is not avaliable on ENCORE database.

23 proteins are bound to RP11-51F16.8 RNA:

eCLIP assay for RP11-51F16.8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-51F16.8 is not available on ENCORE database.

No RBPs affect the gene expression of RP11-51F16.8 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-51F16.8 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-51F16.8 :

The Knockdown/knockout RNA-Seq assay for RP11-51F16.8 is not avaliable on ENCORE database.